##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062334_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3157111 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.209636594975596 32.0 32.0 32.0 32.0 32.0 2 30.81150076763218 32.0 32.0 32.0 32.0 32.0 3 30.799250960767612 32.0 32.0 32.0 32.0 32.0 4 30.888174980227177 32.0 32.0 32.0 32.0 32.0 5 30.633854495454862 32.0 32.0 32.0 32.0 32.0 6 34.31976100935317 36.0 36.0 36.0 32.0 36.0 7 34.20403020356269 36.0 36.0 36.0 32.0 36.0 8 34.20189217293912 36.0 36.0 36.0 32.0 36.0 9 34.39417049321357 36.0 36.0 36.0 32.0 36.0 10 34.012503519831895 36.0 36.0 36.0 32.0 36.0 11 34.356335586553655 36.0 36.0 36.0 32.0 36.0 12 34.105759981198 36.0 36.0 36.0 32.0 36.0 13 34.25224326924204 36.0 36.0 36.0 32.0 36.0 14 34.148270998390615 36.0 36.0 36.0 32.0 36.0 15 34.07771567106763 36.0 36.0 36.0 32.0 36.0 16 34.07960759061053 36.0 36.0 36.0 32.0 36.0 17 33.985508586806105 36.0 36.0 36.0 32.0 36.0 18 34.001304673798295 36.0 36.0 36.0 32.0 36.0 19 33.991455162647114 36.0 36.0 36.0 32.0 36.0 20 33.992575807439145 36.0 36.0 36.0 32.0 36.0 21 33.96214038720843 36.0 36.0 36.0 32.0 36.0 22 33.910864711440304 36.0 36.0 36.0 32.0 36.0 23 33.868933971596185 36.0 36.0 36.0 32.0 36.0 24 33.84395448877154 36.0 36.0 36.0 32.0 36.0 25 33.378484950323255 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 25.0 4 115.0 5 295.0 6 554.0 7 147.0 8 493.0 9 572.0 10 377.0 11 136.0 12 231.0 13 183.0 14 429.0 15 586.0 16 886.0 17 1275.0 18 1775.0 19 2507.0 20 3895.0 21 5693.0 22 8832.0 23 13111.0 24 18995.0 25 26962.0 26 37815.0 27 48991.0 28 67144.0 29 89658.0 30 116020.0 31 159666.0 32 229147.0 33 329790.0 34 722902.0 35 1267903.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.11632386002047 17.192673796808382 11.677177728438597 26.01382461473255 2 17.2128548581391 19.390111057931243 36.63803084002824 26.759003243901414 3 19.209435409202335 23.23691881966158 27.629690471114763 29.923955300021316 4 12.936661630735632 15.314056139912926 34.89520057504018 36.854081654311265 5 15.58250250713325 35.68145703652889 32.574291150651376 16.161749305686477 6 35.081520447451396 34.19466670891892 16.7687481184542 13.955064725175479 7 31.395180037033725 29.634366436109218 20.250735191105314 18.719718335751743 8 28.82674557728754 31.762211796901106 19.200605144872725 20.210437480938634 9 27.486540240092754 14.768117371072128 18.540527978323613 39.2048144105115 10 16.89041167135806 25.74595058117041 29.995858296662664 27.36777945080887 11 37.65377011498627 20.908549475683152 21.85075316039408 19.58692724893649 12 25.633232176885073 23.126660390907084 27.6270016670515 23.61310576515634 13 29.510565356792878 18.973655584908173 25.057734450071834 26.458044608227123 14 24.248242450075498 19.709233198577532 24.041399113447003 32.00112523789996 15 25.826070659686383 26.729968704147485 21.656577726067265 25.787382910098867 16 26.69956543688434 25.174662408134168 23.159480604481605 24.966291550499886 17 24.64118489538735 25.323865993309557 24.759352217270568 25.27559689403252 18 25.649323978657335 24.057504552110686 25.732801807079316 24.560369662152667 19 26.106207320902406 24.614337956604892 24.663721220848174 24.615733501644524 20 26.259662449344884 23.714871244512693 24.351338614341177 25.674127691801246 21 27.458239730130984 23.646396994294527 23.58591370522151 25.309449570352978 22 26.27436089238096 23.921719031839118 24.09197642599688 25.71194364978305 23 24.64356165243895 23.69194921477145 24.887293193755475 26.777195939034126 24 25.150707403392165 24.674749222753885 24.461224601132074 25.713318772721884 25 25.400751247030108 24.02268267440898 24.51772040327433 26.058845675286584 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 287.0 1 287.0 2 753.0 3 1219.0 4 1219.0 5 1219.0 6 2931.0 7 4643.0 8 4643.0 9 4643.0 10 4776.0 11 4909.0 12 4909.0 13 4909.0 14 5763.5 15 6618.0 16 6618.0 17 6618.0 18 10673.0 19 14728.0 20 14728.0 21 14728.0 22 25851.0 23 36974.0 24 36974.0 25 36974.0 26 57709.5 27 78445.0 28 78445.0 29 78445.0 30 98469.0 31 118493.0 32 118493.0 33 118493.0 34 151605.5 35 184718.0 36 184718.0 37 184718.0 38 210902.5 39 237087.0 40 237087.0 41 237087.0 42 274711.5 43 312336.0 44 312336.0 45 312336.0 46 362629.0 47 412922.0 48 412922.0 49 412922.0 50 419677.5 51 426433.0 52 426433.0 53 426433.0 54 397434.5 55 368436.0 56 368436.0 57 368436.0 58 343979.5 59 319523.0 60 319523.0 61 319523.0 62 286747.0 63 253971.0 64 253971.0 65 253971.0 66 212791.0 67 171611.0 68 171611.0 69 171611.0 70 130904.0 71 90197.0 72 90197.0 73 90197.0 74 71450.0 75 52703.0 76 52703.0 77 52703.0 78 44032.0 79 35361.0 80 35361.0 81 35361.0 82 24974.0 83 14587.0 84 14587.0 85 14587.0 86 10712.0 87 6837.0 88 6837.0 89 6837.0 90 4654.0 91 2471.0 92 2471.0 93 2471.0 94 1455.0 95 439.0 96 439.0 97 439.0 98 801.0 99 1163.0 100 1163.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008805518716320078 2 0.003484198053220175 3 0.00481452821899515 4 0.014633631823524736 5 0.0353487729763065 6 0.046276485052315235 7 0.06806856014881961 8 0.0894805409122454 9 0.0975575454901649 10 0.12096502150225318 11 0.12242204977905434 12 0.13426832316000292 13 0.12292884222315908 14 0.1266981110261882 15 0.11586542253344909 16 0.11399662539581283 17 0.12527275727714357 18 0.13233617696685357 19 0.13369818166038508 20 0.12432252144444714 21 0.13220947885582734 22 0.1528295964253395 23 0.14133174284971292 24 0.1366122382139874 25 0.13366650713262854 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 3157111.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.15178581522214 #Duplication Level Percentage of deduplicated Percentage of total 1 76.63812659227197 33.070720239896 2 13.168937862538558 11.365263721164661 3 4.098788822943119 5.306101721684038 4 1.8273148086369448 3.1540758895714034 5 0.9790331709487908 2.1123514849389995 6 0.6199740729297988 1.6051793043634552 7 0.41944388370962576 1.2669826841939904 8 0.3082352495606779 1.0640721175795131 9 0.25281054846155443 0.9818303975137652 >10 1.4353504139946234 11.528300496924253 >50 0.11655208979592503 3.4926417276418937 >100 0.10311636493633923 9.459264088702806 >500 0.019610008740161146 5.9175850476168215 >1k 0.012706110531973671 9.675631078208397 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4506 0.142725422071001 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 4340 0.1374674504634142 No Hit GTACATGGAAGCAGTGGTATCAACG 4327 0.13705568160257908 No Hit GAATAGGACCGCGGTTCTATTTTGT 4064 0.12872528080260717 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 4049 0.12825016288625898 No Hit GTATCTGATCGTCTTCGAACCTCCG 3827 0.12121841772430554 No Hit CTATTGGAGCTGGAATTACCGCGGC 3821 0.12102837055776626 No Hit TCCATGTACTCTGCGTTGATACCAC 3804 0.12048990358590496 No Hit GCGCAAGACGGACCAGAGCGAAAGC 3751 0.11881115361480797 No Hit GATTAAGAGGGACGGCCGGGGGCAT 3730 0.11814598853192049 No Hit ATCAGATACCGTCGTAGTTCCGACC 3614 0.11447174331216102 No Hit GAATAACGCCGCCGCATCGCCAGTC 3528 0.11174773392509797 No Hit GAACTACGACGGTATCTGATCGTCT 3494 0.11067079998137538 No Hit GGGTAGGCACACGCTGAGCCAGTCA 3482 0.11029070564829682 No Hit GTCCTATTCCATTATTCCTAGCTGC 3461 0.10962554056540932 No Hit TCGTAGTTCCGACCATAAACGATGC 3254 0.1030689133198041 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2669811102618817E-4 2 0.0 0.0 0.0 0.0 1.2669811102618817E-4 3 0.0 0.0 0.0 0.0 1.2669811102618817E-4 4 0.0 0.0 0.0 3.1674527756547044E-5 1.2669811102618817E-4 5 0.0 0.0 0.0 6.334905551309409E-5 1.5837263878273522E-4 6 0.0 0.0 0.0 6.334905551309409E-5 1.5837263878273522E-4 7 0.0 0.0 0.0 6.334905551309409E-5 1.5837263878273522E-4 8 0.0 0.0 0.0 1.9004716653928227E-4 1.5837263878273522E-4 9 0.0 0.0 0.0 2.2172169429582933E-4 1.5837263878273522E-4 10 0.0 0.0 0.0 2.2172169429582933E-4 1.9004716653928227E-4 11 0.0 0.0 0.0 2.2172169429582933E-4 2.2172169429582933E-4 12 0.0 0.0 0.0 2.2172169429582933E-4 5.701414996178468E-4 13 0.0 0.0 0.0 2.2172169429582933E-4 7.918631939136761E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCT 40 0.0052892133 14.246539 4 CCGTCGT 700 0.0 12.35131 9 CGTCGTA 700 0.0 12.215581 10 ATTTGCG 445 0.0 11.957463 16 CCGACCA 600 0.0 11.87626 9 CGCATCG 645 0.0 11.784195 13 CGAACGA 275 0.0 11.747819 16 AGGCCCG 895 0.0 11.571059 10 ACCGTCG 765 0.0 11.549877 8 TCGCGTA 330 0.0 11.516373 9 CGAGGTT 350 0.0 11.397231 4 TTGCGCG 485 0.0 11.363291 18 GTCGTAG 720 0.0 11.348065 11 TTTGCGC 480 0.0 11.283521 17 ATCGCCA 685 0.0 11.235837 16 CGCAAGA 740 0.0 11.163197 2 GTCCTAA 385 0.0 11.096799 1 GAGGTTA 360 0.0 11.082575 5 GCGTAAC 370 0.0 11.041361 11 CGCGTAA 345 0.0 11.01566 10 >>END_MODULE