##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062334_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3157111 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.314914489861142 32.0 32.0 32.0 32.0 32.0 2 31.41173116814708 32.0 32.0 32.0 32.0 32.0 3 31.501025779581397 32.0 32.0 32.0 32.0 32.0 4 31.607174723980247 32.0 32.0 32.0 32.0 32.0 5 31.52728301285574 32.0 32.0 32.0 32.0 32.0 6 35.13471049956748 36.0 36.0 36.0 36.0 36.0 7 35.15009576793467 36.0 36.0 36.0 36.0 36.0 8 35.0903056623603 36.0 36.0 36.0 36.0 36.0 9 35.22314863177126 36.0 36.0 36.0 36.0 36.0 10 35.09431787479122 36.0 36.0 36.0 36.0 36.0 11 35.23563314688651 36.0 36.0 36.0 36.0 36.0 12 35.139890868582064 36.0 36.0 36.0 36.0 36.0 13 35.19088527454372 36.0 36.0 36.0 36.0 36.0 14 35.14586658498862 36.0 36.0 36.0 36.0 36.0 15 35.10327321402384 36.0 36.0 36.0 36.0 36.0 16 35.11436341642723 36.0 36.0 36.0 36.0 36.0 17 35.08194802146646 36.0 36.0 36.0 36.0 36.0 18 35.10498522224908 36.0 36.0 36.0 36.0 36.0 19 35.08175639057353 36.0 36.0 36.0 36.0 36.0 20 35.08234585353508 36.0 36.0 36.0 36.0 36.0 21 35.07524474115734 36.0 36.0 36.0 36.0 36.0 22 35.05872394097008 36.0 36.0 36.0 36.0 36.0 23 35.012441121012216 36.0 36.0 36.0 36.0 36.0 24 34.9900421619639 36.0 36.0 36.0 36.0 36.0 25 34.95823333420966 36.0 36.0 36.0 32.0 36.0 26 34.91632540002553 36.0 36.0 36.0 32.0 36.0 27 34.8952580381241 36.0 36.0 36.0 32.0 36.0 28 34.88012933343173 36.0 36.0 36.0 32.0 36.0 29 34.85432694637598 36.0 36.0 36.0 32.0 36.0 30 34.838241037454814 36.0 36.0 36.0 32.0 36.0 31 34.84303276001382 36.0 36.0 36.0 32.0 36.0 32 34.806369177390344 36.0 36.0 36.0 32.0 36.0 33 34.7880945586012 36.0 36.0 36.0 32.0 36.0 34 34.776742724598535 36.0 36.0 36.0 32.0 36.0 35 34.74907280738625 36.0 36.0 36.0 32.0 36.0 36 34.72617560801632 36.0 36.0 36.0 32.0 36.0 37 34.71372466790049 36.0 36.0 36.0 32.0 36.0 38 34.67867902015482 36.0 36.0 36.0 32.0 36.0 39 34.66585432061147 36.0 36.0 36.0 32.0 36.0 40 34.654026735201896 36.0 36.0 36.0 32.0 36.0 41 34.621872971840396 36.0 36.0 36.0 32.0 36.0 42 34.585933785666704 36.0 36.0 36.0 32.0 36.0 43 34.5898192999866 36.0 36.0 36.0 32.0 36.0 44 34.559836825502806 36.0 36.0 36.0 32.0 36.0 45 34.512012406279034 36.0 36.0 36.0 32.0 36.0 46 34.52830483312117 36.0 36.0 36.0 32.0 36.0 47 34.49817443859275 36.0 36.0 36.0 32.0 36.0 48 34.46725028039876 36.0 36.0 36.0 32.0 36.0 49 34.46108039913706 36.0 36.0 36.0 32.0 36.0 50 33.952604770627325 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 17.0 21 89.0 22 238.0 23 699.0 24 1903.0 25 4583.0 26 9482.0 27 17777.0 28 29921.0 29 46341.0 30 68190.0 31 98653.0 32 148484.0 33 246792.0 34 560083.0 35 1923857.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.60072013895907 17.7739874986259 12.137439717824137 26.487852644590898 2 16.546187410416618 19.864775615898132 36.28406940187997 27.30496757180529 3 18.57453586228588 23.49352616063332 27.97350472317713 29.95843325390367 4 12.65360977629203 15.806242867283244 35.12953472910485 36.410612627319885 5 15.342476080188503 35.87048412298459 32.469811799458434 16.31722799736848 6 35.30792034079388 34.377065780959036 16.489885176232992 13.825128702014094 7 31.41244093884627 29.625521323463964 20.218750762168806 18.74328697552096 8 28.88137287539146 31.825330183195966 19.060273775613208 20.233023165799366 9 27.60507945396915 14.507472179470406 18.3826606033174 39.504787763243044 10 16.801974970154674 25.79320144271139 30.01699971904694 27.387823868086997 11 37.8836537581352 20.69556629462822 21.830401275089788 19.590378672146784 12 25.631091209653384 23.121360002863376 27.54059011545682 23.706958672026417 13 29.607131329877216 18.83177373237748 25.02987699830636 26.53121793943894 14 24.278652223504338 19.618695699961137 23.981228407870358 32.121423668664164 15 25.937193845892654 26.70346402137904 21.52274658699045 25.83659554573786 16 26.87203585809938 25.127371194741016 23.01094259910405 24.989650348055548 17 24.76545804059471 25.377504940434463 24.56866419964328 25.28837281932754 18 25.855917007669355 23.919431404217338 25.63862974725944 24.58602184085387 19 26.223373204173058 24.556532855512526 24.54345127554907 24.67664266476535 20 26.328405938213766 23.60043723518115 24.294014369466264 25.77714245713882 21 27.574861954489403 23.568857731007874 23.55026478321478 25.30601553128794 22 26.370406362018944 23.795679024272506 24.14587260314889 25.688042010559652 23 24.727987074258714 23.542947967303018 24.857662590894016 26.87140236754425 24 25.301549422874263 24.505536865824485 24.38878455651385 25.804129154787397 25 25.554343828899267 23.83745772638339 24.54006210107912 26.06813634363822 26 25.108176430920548 24.749082309744573 25.062501761895607 25.080239497439273 27 26.129553252958164 24.086641236244148 24.18837981939818 25.59542569139951 28 25.093606148152535 23.969793903350247 25.01853751736952 25.918062431127698 29 25.01698546550945 24.206719370969218 24.96320211737883 25.813093046142505 30 25.04248346035347 24.324136845362737 25.371328407521943 25.262051286761857 31 25.84340556920552 24.109478570756618 23.932544658708547 26.11457120132932 32 25.37617461026869 24.197597106975334 23.97967635601029 26.446551926745688 33 24.91220612769079 23.852566476123265 24.715127215989554 26.520100180196387 34 25.75300646698833 24.02956373722685 24.952907895857955 25.264521899926862 35 26.501412208820025 23.855480532676868 24.723837711122606 24.9192695473805 36 25.080777964411133 24.503382997937038 24.400060688395182 26.015778349256646 37 26.38523004100901 24.194746399477243 24.167886399939693 25.252137159574055 38 25.263603338621927 24.001278383940257 24.716679267849624 26.018439009588196 39 25.886419577898906 23.908598715724597 24.115591754613632 26.089389951762858 40 26.251088415960034 24.14732963142569 24.6079406140614 24.993641338552873 41 24.926871434042074 24.485771960504398 25.23652161739008 25.350834988063454 42 26.621300296378557 24.699733395499873 24.327399321721664 24.35156698639991 43 25.503062768461422 23.551721811491582 24.69251160317138 26.252703816875616 44 25.136461784207143 24.258475549323418 24.48646880011504 26.118593866354402 45 25.26686581498085 24.491663422667116 24.58073219471853 25.660738567633512 46 25.148149872652397 24.005869930920934 24.89434156016885 25.95163863625781 47 25.48824716275328 23.86951990903073 25.18413992543814 25.458093002777858 48 26.22616056261563 24.80014164848813 23.7997650383531 25.173932750543138 49 25.07548831827579 24.64911750014491 24.4652151919904 25.8101789895889 50 25.02864169172386 25.070578766473528 24.156927013335928 25.743852528466686 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 31.0 1 30.5 2 30.0 3 103.0 4 176.0 5 216.0 6 256.0 7 255.5 8 255.0 9 346.5 10 438.0 11 678.5 12 919.0 13 1637.0 14 2355.0 15 3297.5 16 4240.0 17 4932.0 18 5624.0 19 5929.5 20 6235.0 21 7322.0 22 8409.0 23 9010.0 24 9611.0 25 11755.0 26 13899.0 27 18595.0 28 23291.0 29 27474.0 30 31657.0 31 35594.0 32 39531.0 33 46439.0 34 53347.0 35 63181.5 36 73016.0 37 90856.5 38 108697.0 39 118741.0 40 128785.0 41 141847.0 42 154909.0 43 157310.5 44 159712.0 45 179443.0 46 199174.0 47 216649.5 48 234125.0 49 241105.0 50 248085.0 51 236881.5 52 225678.0 53 224135.5 54 222593.0 55 229117.0 56 235641.0 57 232193.5 58 228746.0 59 210416.0 60 192086.0 61 170218.5 62 148351.0 63 131346.5 64 114342.0 65 97512.0 66 80682.0 67 71586.5 68 62491.0 69 57937.5 70 53384.0 71 41057.5 72 28731.0 73 25854.0 74 22977.0 75 16646.0 76 10315.0 77 9491.5 78 8668.0 79 7443.5 80 6219.0 81 4907.5 82 3596.0 83 3167.5 84 2739.0 85 2275.0 86 1811.0 87 1353.0 88 895.0 89 563.5 90 232.0 91 148.0 92 64.0 93 46.0 94 28.0 95 21.5 96 15.0 97 12.5 98 10.0 99 10.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01577391482276043 2 0.004307735774890398 3 6.334905551309409E-4 4 1.2669811102618817E-4 5 0.0 6 3.8009433307856455E-4 7 6.334905551309409E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.2669811102618817E-4 47 3.1674527756547044E-5 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3157111.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.7864653512539 #Duplication Level Percentage of deduplicated Percentage of total 1 76.84724947164868 35.18563925272807 2 13.245520441887853 12.129311255436471 3 4.094404053691218 5.6240486801509935 4 1.780635982207299 3.261161108101218 5 0.9606078236324536 2.199141841644537 6 0.6110362854465524 1.6786315027174474 7 0.39621032186269967 1.2698749121642958 8 0.281060818322651 1.0295025135780103 9 0.23562005121747998 0.9709388380016835 >10 1.324960294650485 11.210344723869545 >50 0.10468263529689699 3.3201847130326874 >100 0.09098450254473547 8.740854744466509 >500 0.016952867589234304 5.408447176865186 >1k 0.010074450001682722 7.9719187372432945 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 4198 0.1329696675219845 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 4131 0.13084747416229583 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 3996 0.126571412915162 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 3915 0.12400577616688169 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 3788 0.11998311114180021 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 3632 0.11504188481177888 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3595 0.11386992728478662 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 3515 0.11133596506426287 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 3501 0.11089252167567122 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 3480 0.11022735659278371 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 3476 0.11010065848175753 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 3402 0.10775674342777306 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.1674527756547044E-5 2 0.0 0.0 0.0 0.0 3.1674527756547044E-5 3 0.0 0.0 0.0 0.0 3.1674527756547044E-5 4 0.0 0.0 0.0 3.1674527756547044E-5 3.1674527756547044E-5 5 0.0 0.0 0.0 6.334905551309409E-5 9.502358326964114E-5 6 0.0 0.0 0.0 6.334905551309409E-5 1.2669811102618817E-4 7 0.0 0.0 0.0 6.334905551309409E-5 1.2669811102618817E-4 8 0.0 0.0 0.0 1.2669811102618817E-4 1.2669811102618817E-4 9 0.0 0.0 0.0 1.5837263878273522E-4 1.2669811102618817E-4 10 0.0 0.0 0.0 1.9004716653928227E-4 1.2669811102618817E-4 11 0.0 0.0 0.0 1.9004716653928227E-4 1.2669811102618817E-4 12 0.0 0.0 0.0 1.9004716653928227E-4 3.8009433307856455E-4 13 0.0 0.0 0.0 1.9004716653928227E-4 4.4344338859165865E-4 14 0.0 0.0 0.0 1.9004716653928227E-4 5.384669718612998E-4 15 6.334905551309409E-5 0.0 0.0 2.2172169429582933E-4 6.65165082887488E-4 16 6.334905551309409E-5 0.0 0.0 2.2172169429582933E-4 7.601886661571291E-4 17 6.334905551309409E-5 0.0 0.0 2.5339622205237635E-4 7.601886661571291E-4 18 6.334905551309409E-5 0.0 0.0 3.484198053220175E-4 7.918631939136761E-4 19 6.334905551309409E-5 0.0 0.0 4.751179163482057E-4 7.918631939136761E-4 20 6.334905551309409E-5 0.0 0.0 6.018160273743939E-4 0.0010452594159660526 21 6.334905551309409E-5 0.0 0.0 7.918631939136761E-4 0.0011719575269922406 22 6.334905551309409E-5 0.0 0.0 0.0010769339437225996 0.0012669811102618818 23 6.334905551309409E-5 0.0 0.0 0.0015203773323142582 0.001362004693531523 24 6.334905551309409E-5 0.0 0.0 0.0024706131650106696 0.001362004693531523 25 6.334905551309409E-5 0.0 0.0 0.0029457310813588754 0.001362004693531523 26 6.334905551309409E-5 0.0 0.0 0.003579221636489816 0.0014570282768011642 27 9.502358326964114E-5 0.0 0.0 0.004624481052455868 0.0014887028045577112 28 9.502358326964114E-5 0.0 0.0 0.007095094217466538 0.0015203773323142582 29 9.502358326964114E-5 0.0 0.0 0.011751249797678954 0.0015203773323142582 30 9.502358326964114E-5 0.0 0.0 0.020620117569512125 0.0015520518600708052 31 9.502358326964114E-5 0.0 0.0 0.04770183880135985 0.0015837263878273522 32 9.502358326964114E-5 0.0 0.0 0.07636728642103492 0.0016154009155838994 33 9.502358326964114E-5 0.0 0.0 0.1066481349562939 0.0016154009155838994 34 1.2669811102618817E-4 0.0 0.0 0.1425353749044617 0.0016154009155838994 35 1.2669811102618817E-4 0.0 0.0 0.1845357987096431 0.0016154009155838994 36 1.2669811102618817E-4 0.0 0.0 0.24281692978168964 0.0016154009155838994 37 1.2669811102618817E-4 0.0 0.0 0.3314422584445083 0.0016154009155838994 38 1.2669811102618817E-4 0.0 0.0 0.4548778931117721 0.0016470754433404464 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 760 0.0 20.842081 4 TGTAGGA 990 0.0 17.99998 2 CGTCTTA 505 0.0 17.861366 15 CGTCGTA 1070 0.0 17.476618 10 GTATCAA 6845 0.0 17.195831 1 TTAGGAC 755 0.0 17.192036 3 AGGACGT 940 0.0 17.085089 5 ACCGTCG 1115 0.0 16.968592 8 GACGTGA 560 0.0 16.89284 7 ATACCGT 1125 0.0 16.81776 6 TACCGTC 1170 0.0 16.735025 7 CCGTCGT 1120 0.0 16.696411 9 GGACGTG 950 0.0 16.44209 6 GGCGTTA 1155 0.0 16.190458 42 TATGCCG 110 5.625903E-5 15.999983 5 TACGACG 1215 0.0 15.934139 5 TAGCGGC 1320 0.0 15.833317 30 GTCGTAG 1180 0.0 15.661 11 ACGACGG 1240 0.0 15.612886 6 CGACGGT 1245 0.0 15.550183 7 >>END_MODULE