##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062332_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 349722 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.063530461337862 32.0 32.0 32.0 32.0 32.0 2 31.437238721041282 32.0 32.0 32.0 32.0 32.0 3 31.561980658923375 32.0 32.0 32.0 32.0 32.0 4 31.65252686419499 32.0 32.0 32.0 32.0 32.0 5 31.637534956336747 32.0 32.0 32.0 32.0 32.0 6 35.25978634458227 36.0 36.0 36.0 36.0 36.0 7 35.27587626743528 36.0 36.0 36.0 36.0 36.0 8 35.23644780711537 36.0 36.0 36.0 36.0 36.0 9 35.29421083031665 36.0 36.0 36.0 36.0 36.0 10 35.18546445462396 36.0 36.0 36.0 36.0 36.0 11 35.281234809362864 36.0 36.0 36.0 36.0 36.0 12 35.2074190356912 36.0 36.0 36.0 36.0 36.0 13 35.201868913022345 36.0 36.0 36.0 36.0 36.0 14 35.18142124315885 36.0 36.0 36.0 36.0 36.0 15 35.13641978485769 36.0 36.0 36.0 36.0 36.0 16 35.12450174710198 36.0 36.0 36.0 36.0 36.0 17 35.149058394953705 36.0 36.0 36.0 36.0 36.0 18 35.094363523026864 36.0 36.0 36.0 36.0 36.0 19 35.074976695775504 36.0 36.0 36.0 36.0 36.0 20 35.05255317080424 36.0 36.0 36.0 36.0 36.0 21 34.99050102652964 36.0 36.0 36.0 36.0 36.0 22 34.94675771040998 36.0 36.0 36.0 36.0 36.0 23 34.87487776004941 36.0 36.0 36.0 32.0 36.0 24 34.852065354767504 36.0 36.0 36.0 32.0 36.0 25 34.786567616564014 36.0 36.0 36.0 32.0 36.0 26 34.69529797953803 36.0 36.0 36.0 32.0 36.0 27 34.59148981190774 36.0 36.0 36.0 32.0 36.0 28 34.49977410629014 36.0 36.0 36.0 32.0 36.0 29 34.46409147837425 36.0 36.0 36.0 32.0 36.0 30 34.38668428065721 36.0 36.0 36.0 32.0 36.0 31 34.362510794288035 36.0 36.0 36.0 32.0 36.0 32 34.33159480959162 36.0 36.0 36.0 32.0 36.0 33 34.30280908836161 36.0 36.0 36.0 32.0 36.0 34 34.24369642172926 36.0 36.0 36.0 32.0 36.0 35 34.16111654399781 36.0 36.0 36.0 32.0 36.0 36 34.08746375692693 36.0 36.0 36.0 32.0 36.0 37 33.95311704725468 36.0 36.0 36.0 32.0 36.0 38 33.90571082173841 36.0 36.0 36.0 32.0 36.0 39 33.583526343781635 36.0 36.0 36.0 21.0 36.0 40 33.55857223737711 36.0 36.0 36.0 21.0 36.0 41 33.53948278918684 36.0 36.0 36.0 21.0 36.0 42 33.332727137554976 36.0 36.0 36.0 14.0 36.0 43 33.431216795054354 36.0 36.0 36.0 21.0 36.0 44 33.37007108503325 36.0 36.0 36.0 21.0 36.0 45 33.16103362099039 36.0 36.0 36.0 14.0 36.0 46 33.27307118225333 36.0 36.0 36.0 14.0 36.0 47 33.13916768175866 36.0 36.0 36.0 14.0 36.0 48 33.21093325555727 36.0 36.0 36.0 14.0 36.0 49 33.2288903757842 36.0 36.0 36.0 14.0 36.0 50 32.81738352176872 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 0.0 19 4.0 20 10.0 21 20.0 22 55.0 23 234.0 24 561.0 25 1431.0 26 2981.0 27 5289.0 28 7282.0 29 8965.0 30 11362.0 31 14624.0 32 20053.0 33 26703.0 34 55287.0 35 194860.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.085112468822224 18.48613304043386 12.692501315759364 25.73625317498455 2 13.510321615771097 21.261470447779974 39.66022596317447 25.567981973274463 3 19.149209943898295 25.388451398539413 28.854919049988276 26.607419607574016 4 12.018403188818546 17.582536986520722 36.216194577407194 34.18286524725354 5 12.766711845408638 38.16517119311911 34.876845036915036 14.191271924557219 6 33.05739987761708 35.39611462819039 17.778978731678304 13.767506762514225 7 27.94305190980264 31.481004912473338 21.873373708259702 18.70256946946432 8 26.455870662983745 36.23277917889066 20.3681781529329 16.943172005192697 9 26.56023927576761 15.656721624604685 19.017676897650134 38.765362201977574 10 15.444025380231672 28.67114070930828 33.63767117216295 22.2471627382971 11 35.03068151274441 21.914835211968363 23.281635127329707 19.772848147957518 12 23.706258113587364 24.609832953031265 30.892823442620138 20.791085490761233 13 31.013490715482583 21.22514454338017 25.00471803318064 22.756646707956605 14 22.28655903832187 21.476772979681 25.92745094675199 30.30921703524514 15 24.402525434487966 29.512584281229092 24.29758493889432 21.78730534538862 16 23.429667819020413 26.41377791884341 28.150600911017133 22.005953351119043 17 22.378918112100468 27.353154791520122 28.530661496846065 21.73726559953334 18 23.377425497966957 25.012152509707708 30.990043520281823 20.62037847204351 19 24.23875031811072 27.600287085991404 26.403618884768143 21.757343711129728 20 23.831854535472562 25.727365528521307 29.480643141246883 20.96013679475925 21 23.090626268864984 26.775553153647753 25.37872939077324 24.75509118671402 22 22.951372804684862 28.58327471534533 25.777331709186154 22.688020770783652 23 21.47191197579792 28.01339349540492 26.683480021274043 23.831214507523118 24 22.685577033055015 28.028136795150406 27.074516756262152 22.211769415532427 25 23.75086497274978 26.35521928846341 26.26857904278255 23.625336696004254 26 21.06748560987536 27.128351619443038 28.122292469096617 23.681870301584986 27 23.259178771588697 27.996111174654008 26.97300697701018 21.771703076747112 28 22.316457686973678 26.67200434639635 26.69916932359207 24.312368643037903 29 22.325924527978177 27.017119458765464 27.533248122063714 23.123707891192645 30 23.390913224121217 26.182599072964713 28.027805339746138 22.398682363167932 31 23.057588928285487 26.05084067253803 27.121983300926455 23.769587098250028 32 21.649729210392373 27.91134571283148 27.65799873040564 22.780926346370503 33 21.590129246254147 27.89917648404438 28.251744252544892 22.258950017156582 34 21.310598825339273 28.294797522575333 28.91644124694754 21.478162405137855 35 22.42981568217041 27.89101057411315 28.084021022412088 21.595152721304352 36 22.01240417361268 27.927976872993042 28.219351997735338 21.84026695565894 37 22.512303015918857 27.78923167987281 27.034322626397223 22.664142677811107 38 22.55734554875015 28.649613121279188 26.00293947764224 22.79010185232842 39 23.065243436911135 27.10646486770883 27.195678841133358 22.63261285424667 40 24.07147411793973 27.239999885623114 26.910308503063874 21.77821749337329 41 22.842118506911284 26.459318651027395 28.176416426949714 22.522146415111603 42 23.248984120538637 28.275049542889985 27.69740661200983 20.77855972456155 43 21.919429924394066 27.73542498312878 27.257597767280128 23.087547325197022 44 21.78391377826327 27.82218053605488 28.303160110150614 22.090745575531237 45 22.41644553232374 28.25038889143066 26.908141556480764 22.425024019764837 46 21.776651778310278 26.86023436293657 28.216771418930897 23.146342439822256 47 23.60145259064394 26.577261809447556 28.051012238362116 21.77027336154638 48 21.462212220083902 29.544499189312074 25.98748080514036 23.005807785463663 49 22.297204556892527 27.221542297662076 28.37334721141968 22.107905934025712 50 21.26645983157714 30.700141543828547 25.247987647084052 22.78541097751026 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 802.0 1 442.5 2 83.0 3 257.0 4 431.0 5 380.5 6 330.0 7 240.5 8 151.0 9 226.0 10 301.0 11 399.0 12 497.0 13 798.5 14 1100.0 15 1269.5 16 1439.0 17 1456.5 18 1474.0 19 1459.5 20 1445.0 21 1714.5 22 1984.0 23 2202.0 24 2420.0 25 2873.5 26 3327.0 27 4559.5 28 5792.0 29 6941.5 30 8091.0 31 9467.5 32 10844.0 33 13059.0 34 15274.0 35 17497.5 36 19721.0 37 20423.0 38 21125.0 39 20520.0 40 19915.0 41 20351.0 42 20787.0 43 21529.5 44 22272.0 45 23531.5 46 24791.0 47 25318.0 48 25845.0 49 24728.5 50 23612.0 51 22031.5 52 20451.0 53 19567.0 54 18683.0 55 18011.5 56 17340.0 57 16428.0 58 15516.0 59 14147.0 60 12778.0 61 11153.0 62 9528.0 63 8153.5 64 6779.0 65 5779.0 66 4779.0 67 4047.5 68 3316.0 69 2865.0 70 2414.0 71 1951.5 72 1489.0 73 1310.0 74 1131.0 75 887.0 76 643.0 77 554.0 78 465.0 79 359.5 80 254.0 81 203.5 82 153.0 83 117.0 84 81.0 85 64.0 86 47.0 87 32.0 88 17.0 89 9.0 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032597320157153394 2 0.005432886692858899 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 2.859414048873105E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 8.578242146619314E-4 17 0.0 18 0.0 19 2.859414048873105E-4 20 2.859414048873105E-4 21 0.0 22 0.0 23 0.0 24 5.71882809774621E-4 25 0.0 26 8.578242146619314E-4 27 5.71882809774621E-4 28 0.0020015898342111735 29 8.578242146619314E-4 30 0.0014297070244365525 31 5.71882809774621E-4 32 0.001143765619549242 33 5.71882809774621E-4 34 0.001143765619549242 35 0.0 36 2.859414048873105E-4 37 0.0031453554537604154 38 0.0 39 2.859414048873105E-4 40 2.859414048873105E-4 41 0.001143765619549242 42 0.007148535122182762 43 0.004003179668422347 44 0.005432886692858899 45 0.002859414048873105 46 0.002287531239098484 47 5.71882809774621E-4 48 0.005432886692858899 49 0.002859414048873105 50 0.0020015898342111735 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 349722.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 71.7737209033119 #Duplication Level Percentage of deduplicated Percentage of total 1 83.41788079235494 59.872116943362265 2 11.202628519408298 16.08108665470987 3 2.7884224666357085 6.004063676425077 4 0.9747292906575824 2.7983979225576205 5 0.48468142350429744 1.739369460880868 6 0.2536928481823436 1.0925087808363485 7 0.17435236689386516 0.8759742684190481 8 0.11306161131076466 0.6491882028078044 9 0.0791325440636455 0.5111673418793813 >10 0.46229650672145967 6.071976911468158 >50 0.03354647920715606 1.6518923487625223 >100 0.013977699669192172 1.9511419777450012 >500 0.0015974513907648198 0.7011155101460662 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 681 0.19472609672825844 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 619 0.17699772962524518 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 614 0.17556802260080864 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 532 0.15212082740004917 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 459 0.1312471048432755 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 8.578242146619314E-4 0.0 11 0.0 0.0 0.0 8.578242146619314E-4 0.0 12 0.0 0.0 0.0 8.578242146619314E-4 0.0 13 0.0 0.0 0.0 8.578242146619314E-4 2.859414048873105E-4 14 0.0 0.0 0.0 0.0014297070244365525 2.859414048873105E-4 15 0.0 0.0 0.0 0.0014297070244365525 8.578242146619314E-4 16 0.0 0.0 0.0 0.0020015898342111735 8.578242146619314E-4 17 0.0 0.0 0.0 0.0025734726439857946 8.578242146619314E-4 18 0.0 0.0 0.0 0.0034312968586477257 8.578242146619314E-4 19 0.0 0.0 0.0 0.0037172382635350366 8.578242146619314E-4 20 0.0 0.0 0.0 0.005432886692858899 0.001143765619549242 21 0.0 0.0 0.0 0.007148535122182762 0.001143765619549242 22 0.0 0.0 0.0 0.010579831980830488 0.0014297070244365525 23 0.0 0.0 0.0 0.01572677726880208 0.0014297070244365525 24 0.0 0.0 0.0 0.02344719520075946 0.0014297070244365525 25 0.0 0.0 0.0 0.02945196470339298 0.0014297070244365525 26 0.0 0.0 0.0 0.04174744511354733 0.0014297070244365525 27 0.0 0.0 0.0 0.054328866928588994 0.0014297070244365525 28 0.0 0.0 0.0 0.0706275270071657 0.0014297070244365525 29 0.0 0.0 0.0 0.0846386558466439 0.0014297070244365525 30 0.0 0.0 0.0 0.10465455418875565 0.0014297070244365525 31 0.0 0.0 0.0 0.1306752220335009 0.0014297070244365525 32 0.0 0.0 0.0 0.16841948747862587 0.0014297070244365525 33 0.0 0.0 0.0 0.19787145218201885 0.0014297070244365525 34 0.0 0.0 0.0 0.23790324886624234 0.0014297070244365525 35 0.0 0.0 0.0 0.27135839323805766 0.0014297070244365525 36 0.0 0.0 0.0 0.32225596330799894 0.0014297070244365525 37 0.0 0.0 0.0 0.40346332229599513 0.0014297070244365525 38 0.0 0.0 0.0 0.4878160367377517 0.0014297070244365525 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATCG 25 0.002350701 35.19943 18 GTGTAAG 45 4.0499464E-5 29.345446 1 GTATTAA 50 8.301439E-5 26.410902 1 GCCGCGC 45 0.0013975257 24.440552 8 TTAGGAC 310 0.0 23.415627 3 TAGGACA 160 0.0 23.371277 4 TAGGACC 185 0.0 22.590998 4 TGTAGGA 460 0.0 22.477896 2 GGGTAGG 80 3.5904995E-6 22.009083 1 TAGGGAG 60 2.8702166E-4 21.996498 5 GTAGGAC 520 0.0 21.573488 3 TAGGACG 520 0.0 21.573488 4 AGGACGT 540 0.0 20.77447 5 CGAATGT 85 6.0863003E-6 20.708508 33 CTGTAGG 500 0.0 20.688538 1 GATATAC 185 0.0 20.224564 1 GTCCTAC 490 0.0 20.212425 1 GCTTAGG 55 0.004466664 20.008257 1 GACGTGA 330 0.0 19.996815 7 CTAATAT 55 0.004481481 19.996815 4 >>END_MODULE