##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062331_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1660499 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.162128372254365 32.0 32.0 32.0 32.0 32.0 2 31.460137585147596 32.0 32.0 32.0 32.0 32.0 3 31.570032261386487 32.0 32.0 32.0 32.0 32.0 4 31.619128346358533 32.0 32.0 32.0 32.0 32.0 5 31.635354793950494 32.0 32.0 32.0 32.0 32.0 6 35.231178097668234 36.0 36.0 36.0 36.0 36.0 7 35.23754847187502 36.0 36.0 36.0 36.0 36.0 8 35.18495343869524 36.0 36.0 36.0 36.0 36.0 9 35.28991586264129 36.0 36.0 36.0 36.0 36.0 10 35.165974806368446 36.0 36.0 36.0 36.0 36.0 11 35.288514476672376 36.0 36.0 36.0 36.0 36.0 12 35.22201699609575 36.0 36.0 36.0 36.0 36.0 13 35.2384186922124 36.0 36.0 36.0 36.0 36.0 14 35.180269906817166 36.0 36.0 36.0 36.0 36.0 15 35.1614857943305 36.0 36.0 36.0 36.0 36.0 16 35.207070886522665 36.0 36.0 36.0 36.0 36.0 17 35.190657145833875 36.0 36.0 36.0 36.0 36.0 18 35.16806755077841 36.0 36.0 36.0 36.0 36.0 19 35.17407478113507 36.0 36.0 36.0 36.0 36.0 20 35.16530573038587 36.0 36.0 36.0 36.0 36.0 21 35.16660714640599 36.0 36.0 36.0 36.0 36.0 22 35.14096545676932 36.0 36.0 36.0 36.0 36.0 23 35.08844509993683 36.0 36.0 36.0 36.0 36.0 24 35.1069780830943 36.0 36.0 36.0 36.0 36.0 25 35.07496180365059 36.0 36.0 36.0 36.0 36.0 26 35.04507801570492 36.0 36.0 36.0 36.0 36.0 27 35.02742368408533 36.0 36.0 36.0 36.0 36.0 28 35.007733217544846 36.0 36.0 36.0 36.0 36.0 29 34.966866586489964 36.0 36.0 36.0 36.0 36.0 30 34.97072024734733 36.0 36.0 36.0 36.0 36.0 31 34.95417461859357 36.0 36.0 36.0 36.0 36.0 32 34.90366148970882 36.0 36.0 36.0 32.0 36.0 33 34.856423882218536 36.0 36.0 36.0 32.0 36.0 34 34.839434410981276 36.0 36.0 36.0 32.0 36.0 35 34.825200135621884 36.0 36.0 36.0 32.0 36.0 36 34.80124829945697 36.0 36.0 36.0 32.0 36.0 37 34.80528262889649 36.0 36.0 36.0 32.0 36.0 38 34.801324180261474 36.0 36.0 36.0 32.0 36.0 39 34.78824558159926 36.0 36.0 36.0 32.0 36.0 40 34.78991435706977 36.0 36.0 36.0 32.0 36.0 41 34.78292970968366 36.0 36.0 36.0 32.0 36.0 42 34.761737887225465 36.0 36.0 36.0 32.0 36.0 43 34.75395769584926 36.0 36.0 36.0 32.0 36.0 44 34.705380129708 36.0 36.0 36.0 32.0 36.0 45 34.687109718223255 36.0 36.0 36.0 32.0 36.0 46 34.66006182478881 36.0 36.0 36.0 32.0 36.0 47 34.632709203679134 36.0 36.0 36.0 32.0 36.0 48 34.60407082449312 36.0 36.0 36.0 32.0 36.0 49 34.58262907716295 36.0 36.0 36.0 32.0 36.0 50 34.182269908021624 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 7.0 20 23.0 21 73.0 22 189.0 23 505.0 24 1147.0 25 2533.0 26 5070.0 27 9059.0 28 14874.0 29 22454.0 30 32417.0 31 46697.0 32 68119.0 33 113454.0 34 257202.0 35 1086675.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.725719586982976 17.439366739358306 11.543874022578585 26.291039651080133 2 16.60610988150624 19.592092385985517 36.74468885977988 27.05710887272837 3 19.45781227886865 22.69720776033653 27.87415800710029 29.970821953694532 4 12.793993127362995 15.438982763002423 34.65851810721844 37.10850600241614 5 14.862279350966185 36.31426456745834 32.81230521668486 16.011150864890613 6 35.64511107216695 34.32809574482821 16.119511206584537 13.907281976420313 7 31.321909859626533 29.70817808381697 19.530153285247387 19.43975877130911 8 28.571050027732625 33.01585848591297 18.573392697014572 19.83969878933983 9 27.061082240940827 14.310336832482285 18.254994432396526 40.373586494180365 10 16.665191204801935 26.32645527212636 30.52808887941381 26.48026464365789 11 37.828989960246886 21.1122680591798 21.39459283022754 19.664149150345768 12 24.865070599302136 23.271151184765053 28.06597779702234 23.797800418910473 13 29.626214770379267 19.150207256975165 24.977130368642197 26.246447604003375 14 23.683181983247202 19.2103096719721 24.66505550439958 32.44145284038111 15 25.3409366702419 26.78453886452205 21.92852871335665 25.9459957518794 16 26.01744063499328 25.695065914278313 23.28216369866726 25.00532975206114 17 24.35611222891432 25.815793927006283 24.668608653181963 25.159485190897435 18 25.000873232006306 24.86308324370159 25.684523558595075 24.451519965697038 19 25.628982613057882 24.663670378603058 25.200557181907367 24.506789826431692 20 25.99467147807465 23.985394743022876 24.880367215136665 25.139566563765808 21 26.654654206147793 23.956367306675467 24.52902683411844 24.8599516530583 22 26.23536659763119 23.929915043610382 24.97038540824174 24.864332950516683 23 24.715642707403017 24.145994667867914 25.468187574939822 25.67017504978925 24 24.84971267448205 24.455912305192577 25.501931362263818 25.192443658061553 25 25.185848083946 24.016980468486523 25.350859020437266 25.44631242713021 26 24.708851001812718 25.080548512788393 25.61436684352209 24.596233641876793 27 25.282310735426165 24.47014230111178 25.10013592348778 25.147411039974273 28 24.88024532694802 24.404117368613136 25.501994004136158 25.213643300302685 29 24.658369120940733 24.69974242558376 25.48354673406842 25.15834171940709 30 24.61154421750272 24.851052553922496 25.589330828041206 24.94807240053358 31 25.270839217651208 24.571164965458927 24.826511740230426 25.33148407665944 32 25.257529248878797 24.600012887754286 24.7553283938305 25.38712946953642 33 24.67914688089997 24.3815850092894 25.35719770309456 25.582070406716067 34 25.323594045375735 24.620850097952953 25.316487713573878 24.739068143097434 35 25.652515874774767 24.252873840105607 25.468594925853477 24.626015359266145 36 24.48133029970527 24.929990882253396 25.193526279465555 25.395152538575775 37 25.488322065520734 24.667235176292184 24.98093926944104 24.863503488746037 38 24.79513688355127 24.52497713036864 25.260358482600715 25.41952750347938 39 25.586680999828364 24.41431268575145 24.74963640141284 25.249369913007346 40 25.66537267735342 24.507467036997337 25.139024557692935 24.68813572795631 41 24.680665780982196 25.039958180918116 25.452367559858978 24.827008478240707 42 25.709729213416832 24.99533251185542 24.979131811069717 24.315806463658035 43 25.335333611172008 24.22496260018453 25.270651804706716 25.169051983936747 44 24.748936877536604 24.794948805707406 25.01850414257916 25.43761017417683 45 24.995603649091702 24.987172291185377 24.973320774624984 25.043903285097933 46 24.836205323454962 24.738943294731648 24.957557018735134 25.467294363078253 47 25.058913723088338 24.622955183413943 25.281198979330664 25.036932114167055 48 25.44922260820128 25.179532456770076 24.445984880970162 24.92526005405848 49 24.986012650947437 25.20312521643503 24.53173246191195 25.27912967070558 50 25.205378968687725 25.32498387501829 24.52930410541131 24.940333050882675 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 338.0 1 220.5 2 103.0 3 233.5 4 364.0 5 368.0 6 372.0 7 334.5 8 297.0 9 389.5 10 482.0 11 776.5 12 1071.0 13 1898.5 14 2726.0 15 3515.0 16 4304.0 17 4175.0 18 4046.0 19 3897.5 20 3749.0 21 4113.0 22 4477.0 23 5069.5 24 5662.0 25 7013.0 26 8364.0 27 10478.5 28 12593.0 29 15211.0 30 17829.0 31 20667.0 32 23505.0 33 26933.0 34 30361.0 35 35372.5 36 40384.0 37 47576.0 38 54768.0 39 60568.0 40 66368.0 41 72847.0 42 79326.0 43 84211.0 44 89096.0 45 97216.0 46 105336.0 47 112502.0 48 119668.0 49 126256.5 50 132845.0 51 130827.5 52 128810.0 53 128167.0 54 127524.0 55 128179.0 56 128834.0 57 124825.5 58 120817.0 59 111141.0 60 101465.0 61 88731.5 62 75998.0 63 65173.5 64 54349.0 65 46050.5 66 37752.0 67 32291.0 68 26830.0 69 23477.0 70 20124.0 71 15441.0 72 10758.0 73 9198.0 74 7638.0 75 5646.5 76 3655.0 77 3223.5 78 2792.0 79 2373.5 80 1955.0 81 1563.5 82 1172.0 83 999.5 84 827.0 85 663.0 86 499.0 87 326.5 88 154.0 89 101.5 90 49.0 91 34.5 92 20.0 93 17.5 94 15.0 95 15.5 96 16.0 97 12.0 98 8.0 99 6.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03125566471283632 2 0.004456491693159707 3 2.4089144287349766E-4 4 6.0222860718374416E-5 5 0.0 6 1.2044572143674883E-4 7 0.0 8 0.0 9 0.0 10 1.2044572143674883E-4 11 0.0 12 6.0222860718374416E-5 13 0.0 14 0.0 15 0.0 16 5.420057464653698E-4 17 0.0 18 6.0222860718374416E-5 19 0.0 20 6.0222860718374416E-5 21 6.0222860718374416E-5 22 0.0 23 0.0 24 7.828971893388675E-4 25 1.8066858215512325E-4 26 5.420057464653698E-4 27 3.613371643102465E-4 28 0.0012646800750858629 29 4.817828857469953E-4 30 8.431200500572417E-4 31 7.22674328620493E-4 32 4.817828857469953E-4 33 2.4089144287349766E-4 34 4.817828857469953E-4 35 1.8066858215512325E-4 36 6.0222860718374416E-5 37 0.001023788632212365 38 0.0 39 8.431200500572417E-4 40 6.0222860718374416E-5 41 7.828971893388675E-4 42 0.00463716027531483 43 0.003794040225257588 44 0.0036133716431024647 45 0.001866908682269607 46 0.002168022985861479 47 0.0012044572143674883 48 0.004516714553878081 49 0.004215600250286209 50 0.0019271315429879813 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1660499.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.84799311937629 #Duplication Level Percentage of deduplicated Percentage of total 1 72.96729393229685 38.56175047673532 2 15.558173729983155 16.444365164644214 3 5.226092850026868 8.285655569383247 4 2.2088714555351623 4.669376939348357 5 1.134044804209663 2.996599600496835 6 0.6844942274815309 2.1704487734518043 7 0.4356680807243437 1.611692861271639 8 0.31271425238402534 1.3221056526657498 9 0.22230093231830395 1.0573342327429796 >10 1.1134680315582124 10.367566198695782 >50 0.07137706287009357 2.62844492032459 >100 0.05768687596349659 6.237533515331931 >500 0.005745415182555842 2.101144941286845 >1k 0.0020683494657201032 1.5459811536208237 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2057 0.12387842449769618 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1673 0.1007528459818404 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8066858215512325E-4 2 0.0 0.0 0.0 0.0 1.8066858215512325E-4 3 0.0 0.0 0.0 0.0 1.8066858215512325E-4 4 0.0 0.0 0.0 0.0 1.8066858215512325E-4 5 0.0 0.0 0.0 0.0 1.8066858215512325E-4 6 0.0 0.0 0.0 0.0 1.8066858215512325E-4 7 0.0 0.0 0.0 0.0 1.8066858215512325E-4 8 0.0 0.0 0.0 0.0 1.8066858215512325E-4 9 0.0 0.0 0.0 0.0 1.8066858215512325E-4 10 0.0 0.0 0.0 0.0 1.8066858215512325E-4 11 0.0 0.0 0.0 0.0 1.8066858215512325E-4 12 0.0 0.0 0.0 0.0 0.001023788632212365 13 0.0 0.0 0.0 0.0 0.001023788632212365 14 0.0 0.0 0.0 0.0 0.001023788632212365 15 0.0 0.0 0.0 0.0 0.0012646800750858627 16 0.0 0.0 0.0 6.0222860718374416E-5 0.0013851257965226116 17 0.0 0.0 0.0 1.8066858215512325E-4 0.001445348657240986 18 0.0 0.0 0.0 3.613371643102465E-4 0.001445348657240986 19 0.0 0.0 0.0 4.215600250286209E-4 0.001445348657240986 20 0.0 0.0 0.0 6.022286071837442E-4 0.0015055715179593603 21 0.0 0.0 0.0 7.828971893388675E-4 0.0015055715179593603 22 0.0 0.0 0.0 8.431200500572418E-4 0.001565794378677735 23 0.0 0.0 0.0 0.0012646800750858627 0.001565794378677735 24 0.0 0.0 0.0 0.00204757726442473 0.0016260172393961093 25 0.0 0.0 0.0 0.0025895830108901 0.0016260172393961093 26 0.0 0.0 0.0 0.0030111430359187207 0.00204757726442473 27 0.0 0.0 0.0 0.0036735945038208393 0.00204757726442473 28 0.0 0.0 0.0 0.004576937414596456 0.00204757726442473 29 0.0 0.0 0.0 0.007708526171951925 0.00204757726442473 30 0.0 0.0 0.0 0.01336947507947912 0.00204757726442473 31 0.0 0.0 0.0 0.024390258590941637 0.00204757726442473 32 0.0 0.0 0.0 0.03498948207737554 0.00204757726442473 33 0.0 0.0 0.0 0.04769650568895254 0.00204757726442473 34 0.0 0.0 0.0 0.05823550631466806 0.0021078001251431046 35 0.0 0.0 0.0 0.07166520425486556 0.0021078001251431046 36 0.0 0.0 0.0 0.08906961100247576 0.0021078001251431046 37 0.0 0.0 0.0 0.11755502412226686 0.0021078001251431046 38 0.0 0.0 0.0 0.15447163774263037 0.0022282458465798533 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2385 0.0 26.576221 1 CGCGATT 45 0.0013987459 24.443506 12 GGTATCA 1045 0.0 24.009203 1 CGTTCGC 80 8.993792E-5 19.249262 15 GTTCGCG 70 8.127162E-4 18.85642 16 TCAACGC 3465 0.0 18.348503 4 ATCAACG 3480 0.0 18.332632 3 GGCGTTA 515 0.0 17.94376 42 AACGCAG 3570 0.0 17.808842 6 TATCAAC 3625 0.0 17.782993 2 CAACGCA 3595 0.0 17.684996 5 CGTTATT 515 0.0 17.089296 44 GTGTAGG 305 0.0 16.596525 1 GCGTTAT 535 0.0 16.450445 43 ACTGCGC 135 1.0864787E-6 16.295671 8 ATACCGT 505 0.0 16.118195 6 GATTTCG 195 8.913048E-10 15.796645 41 TGCACCG 195 8.931238E-10 15.794267 5 CGGCGTT 575 0.0 15.688718 41 ATTTCGT 215 2.1464075E-10 15.350559 42 >>END_MODULE