##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062329_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 225228 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.899466318574955 32.0 32.0 32.0 32.0 32.0 2 31.325310352176462 32.0 32.0 32.0 32.0 32.0 3 31.513959188022802 32.0 32.0 32.0 32.0 32.0 4 31.606247891025983 32.0 32.0 32.0 32.0 32.0 5 31.61687268012858 32.0 32.0 32.0 32.0 32.0 6 35.1689843181132 36.0 36.0 36.0 36.0 36.0 7 35.1867574191486 36.0 36.0 36.0 36.0 36.0 8 35.13818885751328 36.0 36.0 36.0 36.0 36.0 9 35.22581561795159 36.0 36.0 36.0 36.0 36.0 10 35.121001829257466 36.0 36.0 36.0 36.0 36.0 11 35.23382527927256 36.0 36.0 36.0 36.0 36.0 12 35.16755021578134 36.0 36.0 36.0 36.0 36.0 13 35.163079190864366 36.0 36.0 36.0 36.0 36.0 14 35.09679080753725 36.0 36.0 36.0 36.0 36.0 15 35.0774592857016 36.0 36.0 36.0 36.0 36.0 16 35.131422380876266 36.0 36.0 36.0 36.0 36.0 17 35.111207309925945 36.0 36.0 36.0 36.0 36.0 18 35.06176407906655 36.0 36.0 36.0 36.0 36.0 19 35.073352336299216 36.0 36.0 36.0 36.0 36.0 20 35.02241728381907 36.0 36.0 36.0 36.0 36.0 21 35.02431758040741 36.0 36.0 36.0 36.0 36.0 22 34.98643152716359 36.0 36.0 36.0 36.0 36.0 23 34.94661853765962 36.0 36.0 36.0 36.0 36.0 24 34.9508009661321 36.0 36.0 36.0 36.0 36.0 25 34.89889356563127 36.0 36.0 36.0 32.0 36.0 26 34.86020388228817 36.0 36.0 36.0 32.0 36.0 27 34.83062496670041 36.0 36.0 36.0 32.0 36.0 28 34.77685722911894 36.0 36.0 36.0 32.0 36.0 29 34.693426216989 36.0 36.0 36.0 32.0 36.0 30 34.689021791251534 36.0 36.0 36.0 32.0 36.0 31 34.63154225939937 36.0 36.0 36.0 32.0 36.0 32 34.58175715275188 36.0 36.0 36.0 32.0 36.0 33 34.48695988065427 36.0 36.0 36.0 32.0 36.0 34 34.43239739286412 36.0 36.0 36.0 32.0 36.0 35 34.37571261122063 36.0 36.0 36.0 32.0 36.0 36 34.28323743051486 36.0 36.0 36.0 32.0 36.0 37 34.24196813895253 36.0 36.0 36.0 32.0 36.0 38 34.21648729287655 36.0 36.0 36.0 32.0 36.0 39 34.124025432006675 36.0 36.0 36.0 32.0 36.0 40 34.09796739304172 36.0 36.0 36.0 32.0 36.0 41 34.037788374447224 36.0 36.0 36.0 32.0 36.0 42 33.9894062905145 36.0 36.0 36.0 32.0 36.0 43 33.92689630063757 36.0 36.0 36.0 32.0 36.0 44 33.873275081251 36.0 36.0 36.0 32.0 36.0 45 33.75074147086508 36.0 36.0 36.0 32.0 36.0 46 33.65692542667875 36.0 36.0 36.0 27.0 36.0 47 33.58362192977783 36.0 36.0 36.0 21.0 36.0 48 33.52031274974692 36.0 36.0 36.0 21.0 36.0 49 33.475202905500204 36.0 36.0 36.0 21.0 36.0 50 33.026275596284655 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 0.0 19 6.0 20 20.0 21 22.0 22 55.0 23 126.0 24 296.0 25 630.0 26 1215.0 27 2163.0 28 3551.0 29 5024.0 30 6532.0 31 9026.0 32 12366.0 33 18691.0 34 36926.0 35 128578.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.35186583405136 18.59127530490242 11.778160725547847 25.278698135498367 2 14.546923842000567 21.294668229610686 38.93062659846547 25.22778132992327 3 18.82670005505532 26.38837089527057 28.494680945530753 26.290248104143355 4 11.81513843749445 16.598291509048607 36.22817766885112 35.35839238460582 5 12.676487825669987 38.4716820288774 33.93361393787628 14.918216207576323 6 32.735563389661934 35.88528855460737 17.476223881789846 13.902924173940843 7 27.474825510149714 31.805104161116738 22.07318805832312 18.64688227041043 8 27.407782336121617 33.80574351323992 20.030813220381123 18.75566093025734 9 27.645763404194863 13.973395847763156 19.311098087271564 39.069742660770416 10 14.785905837640081 28.425861793382705 33.53357486635765 23.25465750261957 11 34.94192551547765 21.947537606336688 23.51972223702204 19.59081464116362 12 24.587085087111728 24.228781501411902 31.021453815688993 20.16267959578738 13 30.070861526985986 21.14834745235939 25.516809632905325 23.263981387749304 14 22.45102740334239 20.251922496314844 28.171008933169944 29.126041167172822 15 24.046299749587085 28.109293693501698 24.904097181522726 22.940309375388495 16 22.579442073996457 26.562534687226663 27.44386774232219 23.41415549645469 17 21.94265366650683 26.495373576997533 28.20919246274886 23.35278029374678 18 22.346787907311292 24.879787947270977 30.746313719047897 22.027110426369838 19 23.62539293515904 25.001331983589964 29.64462677819809 21.728648303052907 20 24.338892144848774 24.68343190011899 29.53451613476122 21.443159820271017 21 23.842062265792883 24.484966345214627 28.73843394249383 22.93453744649866 22 23.784342976894525 25.772550482178058 28.050686415543357 22.392420125384056 23 21.78059566306143 25.988775818281916 29.423073507734387 22.807555010922265 24 22.789413159402013 25.47164365983936 29.354462022084775 22.384481158673847 25 22.526062478910262 24.95604454153125 29.588239472889693 22.9296535066688 26 21.90875790875791 25.696525696525697 29.64013764013764 22.754578754578755 27 22.399524037863852 26.0247393752109 29.11405331486316 22.46168327206209 28 22.14240045465847 25.90532092494583 29.099918303555572 22.852360316840123 29 22.856698856698856 25.300921300921303 29.35819735819736 22.484182484182487 30 22.233766233766232 25.7982017982018 29.860361860361863 22.107670107670106 31 23.377643987426076 24.916529028362373 29.261459498818976 22.44436748539258 32 21.443889443889443 26.56721056721057 29.45765345765346 22.53124653124653 33 21.622377622377623 26.373626373626376 30.007770007770006 21.996225996225995 34 22.038947891876532 26.07803786452598 29.683337477355877 22.19967676624161 35 21.93776972667697 26.452306107588754 29.865736054131816 21.744188111602465 36 22.243336722506626 26.13185808095832 29.840116859879146 21.784688336655908 37 21.997948681517265 26.484652852087503 28.866757540371456 22.650640926023772 38 22.436375583852808 27.126289804109614 28.559948141438895 21.87738647059868 39 22.77958335553306 26.610368160264265 28.45738540501181 22.152663079190866 40 22.807555010922265 26.549540909655995 28.937787486458166 21.705116592963574 41 22.47273825169609 26.671225091464496 28.9258693567293 21.930167300110114 42 22.455331770389314 27.228083262290426 28.810120062517765 21.5064649048025 43 22.161588533572512 27.166161961512163 28.54041045405703 22.131839050858297 44 21.775289280417738 27.405045867486034 28.39965543882707 22.420009413269156 45 22.339688657212122 27.301547833654503 28.07901677485814 22.279746734275236 46 22.099724713613355 27.33860225557233 27.71778705265962 22.84388597815469 47 22.712943558412956 27.570773985010476 27.68266259368451 22.033619862892053 48 21.968936763491374 28.121642142279924 27.228285483398306 22.681135610830395 49 22.623757320652345 27.823585043890613 27.024362953392036 22.528294682065013 50 21.95049395049395 29.0989010989011 26.701298701298704 22.24930624930625 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 424.0 1 290.0 2 156.0 3 403.0 4 650.0 5 643.5 6 637.0 7 535.0 8 433.0 9 508.5 10 584.0 11 790.5 12 997.0 13 1558.0 14 2119.0 15 2497.0 16 2875.0 17 2679.0 18 2483.0 19 2247.5 20 2012.0 21 2089.0 22 2166.0 23 2200.5 24 2235.0 25 2382.5 26 2530.0 27 2715.0 28 2900.0 29 3565.0 30 4230.0 31 4926.0 32 5622.0 33 6760.0 34 7898.0 35 8821.5 36 9745.0 37 9899.5 38 10054.0 39 10322.0 40 10590.0 41 10969.0 42 11348.0 43 11686.0 44 12024.0 45 12879.0 46 13734.0 47 14417.0 48 15100.0 49 15130.5 50 15161.0 51 14888.5 52 14616.0 53 14495.5 54 14375.0 55 13841.5 56 13308.0 57 12622.5 58 11937.0 59 11009.0 60 10081.0 61 8686.5 62 7292.0 63 6265.5 64 5239.0 65 4409.5 66 3580.0 67 2936.0 68 2292.0 69 1850.0 70 1408.0 71 1141.5 72 875.0 73 725.5 74 576.0 75 491.0 76 406.0 77 309.0 78 212.0 79 183.5 80 155.0 81 123.5 82 92.0 83 68.5 84 45.0 85 27.5 86 10.0 87 10.5 88 11.0 89 8.0 90 5.0 91 2.5 92 0.0 93 1.0 94 2.0 95 2.0 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0328555952190669 2 0.005327934359848687 3 0.0 4 0.0 5 0.0 6 8.879890599747812E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.439945299873906E-4 17 0.0 18 4.439945299873906E-4 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.002219972649936953 25 0.0 26 0.0013319835899621717 27 0.0 28 0.0017759781199495623 29 0.0013319835899621717 30 0.0013319835899621717 31 0.0 32 0.0013319835899621717 33 0.0013319835899621717 34 0.0017759781199495623 35 0.0 36 4.439945299873906E-4 37 0.0031079617099117342 38 0.0 39 0.0 40 0.0 41 0.0017759781199495623 42 0.005327934359848687 43 0.0062159234198234685 44 0.0062159234198234685 45 0.004439945299873906 46 0.0035519562398991246 47 0.0017759781199495623 48 0.004439945299873906 49 0.003995950769886515 50 0.0013319835899621717 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 225228.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 69.95337299194819 #Duplication Level Percentage of deduplicated Percentage of total 1 78.57504249907828 54.965892557962036 2 14.10719514189427 19.73691767262259 3 4.084846929495626 8.572464626220654 4 1.4897305154792073 4.16846697627217 5 0.6680424010205535 2.336590962651371 6 0.34893856544472757 1.464565777189821 7 0.1837637690964041 0.8998426837404899 8 0.11532296128347708 0.6453784100159258 9 0.08214083717438755 0.5171425758657734 >10 0.30997106695348026 3.8156911961550084 >50 0.022912568561204823 1.0992615227267042 >100 0.011456284280602412 1.4563322968161398 >500 6.36460237811245E-4 0.32145274176131244 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 722 0.320564050650896 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 425 0.18869767524464098 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 372 0.1651659651553093 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 369 0.16383398156534712 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.439945299873906E-4 2 0.0 0.0 0.0 0.0 4.439945299873906E-4 3 0.0 0.0 0.0 0.0 4.439945299873906E-4 4 0.0 0.0 0.0 0.0 4.439945299873906E-4 5 0.0 0.0 0.0 0.0 4.439945299873906E-4 6 0.0 0.0 0.0 0.0 4.439945299873906E-4 7 0.0 0.0 0.0 0.0 4.439945299873906E-4 8 0.0 0.0 0.0 0.0 4.439945299873906E-4 9 0.0 0.0 0.0 0.0 4.439945299873906E-4 10 0.0 0.0 0.0 0.0 4.439945299873906E-4 11 0.0 0.0 0.0 0.0 4.439945299873906E-4 12 0.0 0.0 0.0 0.0 8.879890599747812E-4 13 0.0 0.0 0.0 0.0 8.879890599747812E-4 14 0.0 0.0 0.0 0.0 8.879890599747812E-4 15 0.0 0.0 0.0 0.0 8.879890599747812E-4 16 0.0 0.0 0.0 0.0 8.879890599747812E-4 17 0.0 0.0 0.0 4.439945299873906E-4 8.879890599747812E-4 18 0.0 0.0 0.0 0.0013319835899621717 8.879890599747812E-4 19 0.0 0.0 0.0 0.0013319835899621717 8.879890599747812E-4 20 0.0 0.0 0.0 0.003107961709911734 8.879890599747812E-4 21 0.0 0.0 0.0 0.0035519562398991246 8.879890599747812E-4 22 0.0 0.0 0.0 0.006659917949810858 0.0013319835899621717 23 0.0 0.0 0.0 0.00799190153977303 0.0013319835899621717 24 0.0 0.0 0.0 0.012431846839646935 0.0013319835899621717 25 0.0 0.0 0.0 0.014207824959596499 0.0013319835899621717 26 0.0 0.0 0.0 0.01553980854955867 0.0013319835899621717 27 0.0 0.0 0.0 0.019535759319445185 0.0013319835899621717 28 0.0 0.0 0.0 0.02397570461931909 0.0013319835899621717 29 0.0 0.0 0.0 0.03596355692897864 0.0013319835899621717 30 0.0 0.0 0.0 0.04883939829861296 0.0013319835899621717 31 0.0 0.0 0.0 0.07725504821780596 0.0013319835899621717 32 0.0 0.0 0.0 0.10078675830713765 0.0013319835899621717 33 0.0 0.0 0.0 0.12875841369634325 0.0013319835899621717 34 0.0 0.0 0.0 0.1549540909655993 0.0013319835899621717 35 0.0 0.0 0.0 0.19890954943435096 0.0013319835899621717 36 0.0 0.0 0.0 0.23398511730335483 0.0013319835899621717 37 0.0 0.0 0.0 0.29481236791162735 0.0013319835899621717 38 0.0 0.0 0.0 0.37295540518940806 0.0013319835899621717 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACTAA 25 0.0023490333 35.199112 14 GATATAA 30 0.0057110647 29.358667 1 TAGGACC 60 9.708972E-6 25.666018 4 CCGTGAT 100 1.7262209E-9 24.19939 27 TTCCGTG 100 1.7262209E-9 24.19939 25 TCCGTGA 110 1.9826984E-10 23.999393 26 TCCTACA 170 0.0 23.298702 2 TTTCCGT 95 2.6615453E-8 23.15731 24 GTCCTAA 120 5.838956E-10 22.019001 1 GAGTTAG 50 0.0025611066 22.019001 1 TCCTAGA 50 0.0025710417 22.00433 2 TTCTCGC 70 3.201021E-5 21.999447 42 CGTGATT 110 5.1986717E-9 21.999445 28 GTCCTAC 175 0.0 21.389885 1 TTTTCCG 105 7.678136E-8 20.951853 23 TTCGTCA 95 6.817045E-7 20.84158 44 CCTACAG 160 1.8189894E-12 20.62448 3 TTTCTCG 75 5.4483906E-5 20.532816 41 GTACAGG 65 4.8864994E-4 20.32523 1 AAGAGTG 65 4.9158814E-4 20.30718 5 >>END_MODULE