##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062327_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1767594 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26760160987195 32.0 32.0 32.0 32.0 32.0 2 31.428098307643044 32.0 32.0 32.0 32.0 32.0 3 31.550803521623177 32.0 32.0 32.0 32.0 32.0 4 31.636037461091178 32.0 32.0 32.0 32.0 32.0 5 31.607606158427785 32.0 32.0 32.0 32.0 32.0 6 35.23493404028301 36.0 36.0 36.0 36.0 36.0 7 35.241816276814696 36.0 36.0 36.0 36.0 36.0 8 35.185430025220725 36.0 36.0 36.0 36.0 36.0 9 35.26639658202053 36.0 36.0 36.0 36.0 36.0 10 35.15002653324236 36.0 36.0 36.0 36.0 36.0 11 35.2751265279244 36.0 36.0 36.0 36.0 36.0 12 35.19298266457116 36.0 36.0 36.0 36.0 36.0 13 35.2319435345447 36.0 36.0 36.0 36.0 36.0 14 35.18719909662513 36.0 36.0 36.0 36.0 36.0 15 35.16815003897954 36.0 36.0 36.0 36.0 36.0 16 35.17659258856955 36.0 36.0 36.0 36.0 36.0 17 35.15693139940507 36.0 36.0 36.0 36.0 36.0 18 35.15632322807161 36.0 36.0 36.0 36.0 36.0 19 35.14824048961469 36.0 36.0 36.0 36.0 36.0 20 35.14784107662732 36.0 36.0 36.0 36.0 36.0 21 35.140264110423544 36.0 36.0 36.0 36.0 36.0 22 35.13370774057844 36.0 36.0 36.0 36.0 36.0 23 35.10031262835244 36.0 36.0 36.0 36.0 36.0 24 35.081798195739516 36.0 36.0 36.0 36.0 36.0 25 35.06956631443646 36.0 36.0 36.0 36.0 36.0 26 35.02287516250904 36.0 36.0 36.0 36.0 36.0 27 35.01301203783222 36.0 36.0 36.0 36.0 36.0 28 34.995631349733024 36.0 36.0 36.0 36.0 36.0 29 34.97146969270093 36.0 36.0 36.0 36.0 36.0 30 34.949690935814445 36.0 36.0 36.0 36.0 36.0 31 34.959326066958816 36.0 36.0 36.0 36.0 36.0 32 34.93477122008787 36.0 36.0 36.0 36.0 36.0 33 34.91254043632192 36.0 36.0 36.0 32.0 36.0 34 34.898839326225364 36.0 36.0 36.0 32.0 36.0 35 34.892182820263024 36.0 36.0 36.0 32.0 36.0 36 34.87018568743727 36.0 36.0 36.0 32.0 36.0 37 34.86431952133805 36.0 36.0 36.0 32.0 36.0 38 34.84248701907791 36.0 36.0 36.0 32.0 36.0 39 34.82837008951151 36.0 36.0 36.0 32.0 36.0 40 34.81381640806656 36.0 36.0 36.0 32.0 36.0 41 34.79120657798114 36.0 36.0 36.0 32.0 36.0 42 34.76204546971759 36.0 36.0 36.0 32.0 36.0 43 34.758764173220776 36.0 36.0 36.0 32.0 36.0 44 34.709193400747004 36.0 36.0 36.0 32.0 36.0 45 34.69741354632342 36.0 36.0 36.0 32.0 36.0 46 34.675962353345845 36.0 36.0 36.0 32.0 36.0 47 34.653546572346364 36.0 36.0 36.0 32.0 36.0 48 34.62944544957722 36.0 36.0 36.0 32.0 36.0 49 34.61781947664452 36.0 36.0 36.0 32.0 36.0 50 34.203524112437584 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 5.0 20 23.0 21 40.0 22 152.0 23 362.0 24 1027.0 25 2293.0 26 4823.0 27 8867.0 28 14832.0 29 23347.0 30 34073.0 31 49617.0 32 73964.0 33 124080.0 34 283312.0 35 1146774.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.7088424494619 17.348176293255417 11.643868563858174 26.299112693424515 2 16.78777811597958 19.43035375028713 36.29439700189758 27.48747113183572 3 19.295085398763288 22.560944562935976 27.831454126805422 30.312515911495314 4 13.052092279109342 15.296046490313952 34.21515347981494 37.43670775076177 5 15.131642221007766 36.06054331481098 32.576259027808426 16.231555436372833 6 36.06694082511169 33.9891977273023 15.80212843355731 14.141733014028699 7 31.640297489129292 29.558597732284674 19.346354423017956 19.454750355568077 8 28.94703195417047 32.577503657514114 18.259509819562638 20.215954568752778 9 27.015932391714387 14.311996985733149 18.151962498175486 40.52010812437698 10 17.063486899982067 25.957559234507038 29.991010373994463 26.987943491516432 11 37.995150470074016 21.003635450222166 21.159893052363834 19.84132102733999 12 25.024807732997512 23.139250302954185 27.56051446203144 24.275427502016868 13 29.70235246329191 18.80030142668509 24.872001149585255 26.625344960437747 14 24.030574894461058 18.828984483993498 24.154472124254777 32.98596849729067 15 25.73639648018719 26.436217819250345 21.454587422224787 26.372798278337672 16 26.61951010049293 25.34285441112658 22.642506422597585 25.3951290657829 17 24.735487900502036 25.72768407224736 24.14881471650164 25.388013310748963 18 25.64767674801863 24.522923058384112 25.022870161412143 24.80653003218512 19 26.064412981714124 24.587207243292294 24.656567062345765 24.691812712647813 20 26.292579161457123 23.80953727957275 24.200351891558565 25.69753166741156 21 27.01400887307832 23.704651633802783 24.207312312669085 25.07402718044981 22 26.652274221342687 23.54200116090007 24.502685571460415 25.30303904629683 23 25.041808290600997 23.722838754644737 25.057535901950224 26.17781705280404 24 25.279860509612877 24.205621593854186 24.842708408176843 25.671809488356097 25 25.44345691025634 23.831318348712088 24.812824240915596 25.91240050011598 26 25.26137371689266 24.721201368647826 25.04961574669153 24.96780916776798 27 25.652259266446293 24.173124151739064 24.569087688470216 25.60552889334443 28 25.463068779716174 23.99997510687073 24.990721651817537 25.546234461595557 29 25.162368153664765 24.30419305856342 25.161745836699502 25.371692951072312 30 25.117533975946692 24.45770304383296 25.160530761371234 25.264232218849113 31 25.712837409707262 24.125190089975924 24.31052781649981 25.851444683817004 32 25.689840697631 24.123916174751724 24.19491712407119 25.99132600354609 33 25.12937113774752 24.06175870069343 24.722262924243136 26.086607237315913 34 25.94663646331073 24.103828184845444 24.80507181028913 25.144463541554696 35 26.152417871132865 23.823368341491342 25.01148457672263 25.012729210653163 36 25.011046107385702 24.541254170223766 24.573218578279704 25.874481144110828 37 26.15317421343369 24.161837022419657 24.57676022711586 25.10822853703079 38 25.3107331208411 24.031480079701563 24.858423370977725 25.799363428479616 39 26.1074586030755 24.016241387250272 24.238635470017535 25.637664539656697 40 25.932031749444157 24.219643695653403 24.599765782788996 25.248558772113444 41 24.983720597362144 24.740335748889294 25.06422655723589 25.211717096512672 42 26.208978192423782 24.61430094964371 24.4502278635704 24.726492994362108 43 25.842102255657817 23.775919923553516 24.662703655026757 25.719274165761913 44 25.2822169782232 24.42734832870633 24.53031728582881 25.760117407241662 45 25.3993264080736 24.611903895755624 24.52720986637353 25.46155982979725 46 25.37834856156827 24.351107465135357 24.533619982461598 25.73692399083477 47 25.495142489245133 24.311767780888133 24.868916230852264 25.324173499014467 48 26.13514016587148 24.82980323199886 23.81425200267268 25.220804599456976 49 25.41710843291697 24.950014879554814 24.027539057416977 25.60533763011124 50 25.611296049460385 24.899465702925394 24.180223992903198 25.309014254711027 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 170.0 1 114.0 2 58.0 3 180.0 4 302.0 5 324.5 6 347.0 7 272.0 8 197.0 9 292.0 10 387.0 11 586.0 12 785.0 13 1505.5 14 2226.0 15 2825.5 16 3425.0 17 3419.5 18 3414.0 19 3157.5 20 2901.0 21 3316.5 22 3732.0 23 4388.0 24 5044.0 25 6207.0 26 7370.0 27 9320.0 28 11270.0 29 13050.5 30 14831.0 31 17079.5 32 19328.0 33 22726.5 34 26125.0 35 31188.5 36 36252.0 37 44244.0 38 52236.0 39 59724.0 40 67212.0 41 75074.0 42 82936.0 43 87909.0 44 92882.0 45 102519.5 46 112157.0 47 120434.0 48 128711.0 49 135710.5 50 142710.0 51 140588.0 52 138466.0 53 139009.5 54 139553.0 55 140603.5 56 141654.0 57 137237.5 58 132821.0 59 123350.0 60 113879.0 61 100217.5 62 86556.0 63 75281.0 64 64006.0 65 54009.5 66 44013.0 67 37854.5 68 31696.0 69 27600.0 70 23504.0 71 18022.0 72 12540.0 73 10897.5 74 9255.0 75 6789.5 76 4324.0 77 3793.5 78 3263.0 79 2687.0 80 2111.0 81 1695.5 82 1280.0 83 1073.0 84 866.0 85 680.5 86 495.0 87 335.5 88 176.0 89 113.0 90 50.0 91 33.0 92 16.0 93 17.0 94 18.0 95 15.0 96 12.0 97 18.5 98 25.0 99 16.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.031738057495103514 2 0.00429962989238479 3 2.2629631012551526E-4 4 0.0 5 0.0 6 1.6972223259413641E-4 7 0.0 8 0.0 9 0.0 10 5.6574077531378816E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 3.960185427196517E-4 17 0.0 18 3.960185427196517E-4 19 0.0 20 2.2629631012551526E-4 21 0.0 22 0.0 23 1.1314815506275763E-4 24 9.617593180334398E-4 25 2.2629631012551526E-4 26 5.657407753137881E-4 27 3.960185427196517E-4 28 0.002149814946192395 29 3.3944446518827283E-4 30 0.0011314815506275762 31 5.657407753137881E-4 32 6.788889303765457E-4 33 2.8287038765689406E-4 34 0.0011314815506275762 35 3.3944446518827283E-4 36 1.6972223259413641E-4 37 0.002149814946192395 38 0.0 39 6.223148528451669E-4 40 2.2629631012551526E-4 41 0.0013012037832217127 42 0.005035092900292714 43 0.004695648435104441 44 0.004016759504727896 45 0.0031115742642258346 46 0.0024892594113806676 47 0.0012446297056903338 48 0.004582500280041683 49 0.0038470372721337593 50 0.002149814946192395 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1767594.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.5394388459118 #Duplication Level Percentage of deduplicated Percentage of total 1 70.6700938632187 34.30286699308551 2 16.142174905976344 15.670642233773016 3 5.654541490925326 8.234048127013224 4 2.5821646451432247 5.013472915320204 5 1.348924286312749 3.273801395162145 6 0.8115750530140211 2.3636038592785025 7 0.5348947455643283 1.8174443553923485 8 0.37399654599452803 1.4522865978306907 9 0.2707096766062368 1.1826086213362492 >10 1.4390726272530525 12.430898078713632 >50 0.09414803056889376 3.1574154768243696 >100 0.0672738437203506 6.6434838084958505 >500 0.007617624389288493 2.506087064200847 >1k 0.002812661312968059 1.9513404735735251 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2262 0.12797056337597887 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1965 0.11116806234915938 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1844 0.10432259896786253 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1832 0.10364371003748597 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1829 0.10347398780489185 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6972223259413644E-4 2 0.0 0.0 0.0 0.0 1.6972223259413644E-4 3 0.0 0.0 0.0 0.0 1.6972223259413644E-4 4 0.0 0.0 0.0 0.0 1.6972223259413644E-4 5 0.0 0.0 0.0 0.0 1.6972223259413644E-4 6 0.0 0.0 0.0 0.0 2.8287038765689406E-4 7 0.0 0.0 0.0 0.0 2.8287038765689406E-4 8 0.0 0.0 0.0 0.0 2.8287038765689406E-4 9 0.0 0.0 0.0 0.0 2.8287038765689406E-4 10 0.0 0.0 0.0 0.0 2.8287038765689406E-4 11 0.0 0.0 0.0 0.0 2.8287038765689406E-4 12 0.0 0.0 0.0 0.0 5.657407753137881E-4 13 0.0 0.0 0.0 0.0 6.223148528451669E-4 14 0.0 0.0 0.0 0.0 6.223148528451669E-4 15 0.0 0.0 0.0 5.657407753137881E-5 0.0010749074730961974 16 0.0 0.0 0.0 5.657407753137881E-5 0.0010749074730961974 17 0.0 0.0 0.0 1.1314815506275762E-4 0.0010749074730961974 18 0.0 0.0 0.0 1.6972223259413644E-4 0.0010749074730961974 19 0.0 0.0 0.0 2.8287038765689406E-4 0.0011314815506275762 20 0.0 0.0 0.0 4.525926202510305E-4 0.0013577778607530915 21 0.0 0.0 0.0 5.091666977824094E-4 0.0015840741708786068 22 0.0 0.0 0.0 7.920370854393034E-4 0.0016406482484099855 23 0.0 0.0 0.0 9.617593180334398E-4 0.001810370481004122 24 0.0 0.0 0.0 0.0012446297056903338 0.001810370481004122 25 0.0 0.0 0.0 0.001527500093347228 0.001810370481004122 26 0.0 0.0 0.0 0.0019235186360668797 0.0019800927135982583 27 0.0 0.0 0.0 0.0024892594113806676 0.0020366667911296374 28 0.0 0.0 0.0 0.003564166884476865 0.0020366667911296374 29 0.0 0.0 0.0 0.005317963287949608 0.0020366667911296374 30 0.0 0.0 0.0 0.008259815319581306 0.0020366667911296374 31 0.0 0.0 0.0 0.014200093460376081 0.0020366667911296374 32 0.0 0.0 0.0 0.020253519756233615 0.002093240868661016 33 0.0 0.0 0.0 0.027098983137530452 0.002206389023723774 34 0.0 0.0 0.0 0.03383129836376453 0.002319537178786531 35 0.0 0.0 0.0 0.04146879883050067 0.002319537178786531 36 0.0 0.0 0.0 0.052557318026650916 0.002319537178786531 37 0.0 5.657407753137881E-5 0.0 0.06726657818480941 0.002319537178786531 38 0.0 5.657407753137881E-5 0.0 0.08921732026698438 0.0023761112563179102 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2245 0.0 26.856476 1 GGTATCA 955 0.0 23.963198 1 AGTATCG 85 2.3542634E-7 23.293787 8 TTAGTAC 65 4.933875E-4 20.307404 3 GAGCGAA 865 0.0 19.074877 16 TCAACGC 3190 0.0 18.896284 4 CGGATCG 95 1.5979851E-5 18.526054 26 AGCGAAA 880 0.0 18.499737 17 AACGCAG 3250 0.0 18.479738 6 GACGGAC 885 0.0 18.39522 7 CAACGCA 3285 0.0 18.282846 5 ATCAACG 3285 0.0 18.282846 3 GCGAAAG 890 0.0 18.04469 18 CGCAATA 405 0.0 17.92618 36 AGAGCGA 925 0.0 17.837585 15 TATCAAC 3475 0.0 17.409826 2 ACGGACC 960 0.0 17.187258 8 AAGACGG 1005 0.0 17.074385 5 TACACCG 155 1.4406396E-8 17.032017 5 CAAGACG 1055 0.0 16.890755 4 >>END_MODULE