##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062326_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1467680 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29471069988008 32.0 32.0 32.0 32.0 32.0 2 31.443296222609835 32.0 32.0 32.0 32.0 32.0 3 31.57029734001962 32.0 32.0 32.0 32.0 32.0 4 31.647291643955086 32.0 32.0 32.0 32.0 32.0 5 31.619800637741196 32.0 32.0 32.0 32.0 32.0 6 35.264157036956284 36.0 36.0 36.0 36.0 36.0 7 35.273987517715035 36.0 36.0 36.0 36.0 36.0 8 35.21867982121444 36.0 36.0 36.0 36.0 36.0 9 35.3047864657146 36.0 36.0 36.0 36.0 36.0 10 35.19048770849231 36.0 36.0 36.0 36.0 36.0 11 35.30726043824267 36.0 36.0 36.0 36.0 36.0 12 35.23376144663687 36.0 36.0 36.0 36.0 36.0 13 35.26272416330535 36.0 36.0 36.0 36.0 36.0 14 35.22794069551946 36.0 36.0 36.0 36.0 36.0 15 35.204963616047095 36.0 36.0 36.0 36.0 36.0 16 35.22016515861768 36.0 36.0 36.0 36.0 36.0 17 35.194444974381334 36.0 36.0 36.0 36.0 36.0 18 35.19509429848468 36.0 36.0 36.0 36.0 36.0 19 35.185554071732255 36.0 36.0 36.0 36.0 36.0 20 35.192013926741524 36.0 36.0 36.0 36.0 36.0 21 35.18140602856209 36.0 36.0 36.0 36.0 36.0 22 35.16723945274174 36.0 36.0 36.0 36.0 36.0 23 35.138928104218905 36.0 36.0 36.0 36.0 36.0 24 35.11542025509648 36.0 36.0 36.0 36.0 36.0 25 35.10421345252371 36.0 36.0 36.0 36.0 36.0 26 35.06391175188052 36.0 36.0 36.0 36.0 36.0 27 35.055100566881066 36.0 36.0 36.0 36.0 36.0 28 35.03194020494931 36.0 36.0 36.0 36.0 36.0 29 35.013586067807694 36.0 36.0 36.0 36.0 36.0 30 34.99771884879538 36.0 36.0 36.0 36.0 36.0 31 35.0018117028235 36.0 36.0 36.0 36.0 36.0 32 34.97613171808569 36.0 36.0 36.0 36.0 36.0 33 34.95494726370871 36.0 36.0 36.0 36.0 36.0 34 34.94512904720375 36.0 36.0 36.0 36.0 36.0 35 34.93319933500491 36.0 36.0 36.0 36.0 36.0 36 34.911869072277334 36.0 36.0 36.0 32.0 36.0 37 34.90087689414586 36.0 36.0 36.0 32.0 36.0 38 34.88776913223591 36.0 36.0 36.0 32.0 36.0 39 34.87947985936989 36.0 36.0 36.0 32.0 36.0 40 34.864228578436716 36.0 36.0 36.0 32.0 36.0 41 34.839426850539624 36.0 36.0 36.0 32.0 36.0 42 34.81170282350376 36.0 36.0 36.0 32.0 36.0 43 34.8048886678295 36.0 36.0 36.0 32.0 36.0 44 34.766917175406086 36.0 36.0 36.0 32.0 36.0 45 34.751938433445986 36.0 36.0 36.0 32.0 36.0 46 34.73511051455358 36.0 36.0 36.0 32.0 36.0 47 34.711929712198845 36.0 36.0 36.0 32.0 36.0 48 34.69195124277772 36.0 36.0 36.0 32.0 36.0 49 34.682896816744794 36.0 36.0 36.0 32.0 36.0 50 34.26962893818816 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 3.0 20 12.0 21 27.0 22 95.0 23 239.0 24 645.0 25 1544.0 26 3274.0 27 6253.0 28 10993.0 29 17419.0 30 26637.0 31 39686.0 32 60372.0 33 102761.0 34 237193.0 35 960526.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.15484039819685 17.536637463928233 11.97323635134343 26.335285786531482 2 16.439561188334693 19.364063777596073 36.69085581902426 27.50551921504497 3 18.871195004892087 22.623794352432007 28.38228600862861 30.122724634047298 4 12.888776845088849 15.332633816635779 34.79409680584323 36.98449253243214 5 14.921927751231706 36.28879339419587 32.98732215968205 15.801956694890368 6 35.94536956284748 34.43066608525019 15.824225989316473 13.79973836258585 7 31.367873105854137 29.927436498419276 19.604545950070857 19.10014444565573 8 28.68826992259893 33.2315627384716 18.3982884552491 19.68187888368037 9 27.086694647334568 14.311907227733567 18.22393164722555 40.377466477706314 10 16.516077425649613 26.512200556116156 30.779550569300234 26.192171448933998 11 37.99268232857298 20.987613103673823 21.40793633489589 19.611768232857298 12 24.500981140303065 23.33505941349613 28.19306660852502 23.970892837675787 13 29.559100076310912 19.11131854355173 25.01321814019405 26.316363239943314 14 23.614888804098985 19.02247083832988 24.643859696936662 32.71878066063447 15 25.423389294669136 26.870503106944295 21.714202005886843 25.991905592499727 16 26.205156053153527 25.81774005517578 22.944552362821963 25.032551528848728 17 24.479382426687017 26.120271448817178 24.481290199498527 24.919055924997274 18 25.275707614340476 25.10782337815243 25.31617970699295 24.300289300514148 19 25.84861822740652 24.99359533413278 24.910266543115668 24.247519895345036 20 26.00356210379431 24.31129026103925 24.488714099608085 25.196433535558356 21 26.6575820342309 24.245612122533522 24.306388313528835 24.790417529706748 22 26.16524037937425 24.01170554889349 24.787828409462552 25.035225662269706 23 24.805679712198845 24.175160797994113 25.323163087321486 25.695996402485555 24 25.006012927965465 24.74757626198242 24.91082810793427 25.335582702117843 25 25.228949927061706 24.29495822996718 24.97269498303103 25.503396859940082 26 24.969765104672355 25.015415538181134 25.186843136252918 24.827976220893593 27 25.452688468027002 24.601546935427166 24.70974520261965 25.236019393926178 28 25.127703021742732 24.53458321154107 25.135743014574874 25.201970752141328 29 24.976902259081704 24.768681916172234 25.152962915520867 25.1014529092252 30 24.95574606211495 24.797399408312245 25.29587794498203 24.950976584590773 31 25.412319084483336 24.521658079382753 24.569556999715196 25.496465836418714 32 25.374437032847986 24.548229506632964 24.467080474493585 25.61025298602547 33 24.944231484648498 24.445755665086388 24.977004430139118 25.633008420125996 34 25.595676922007716 24.416383108326325 25.090313955976118 24.897626013689838 35 25.860680422654593 24.343315554659203 25.063569888722032 24.73243413396417 36 24.85151665255135 24.866370097426334 24.897712228813912 25.384401021208404 37 25.873579351884658 24.605420947916382 24.70231119348069 24.81868850671827 38 25.101725171699552 24.433391474980922 25.10090755478033 25.36397579853919 39 25.60493843984002 24.545776639162757 24.510482601674763 25.33880231932246 40 25.651148038703337 24.62496857278543 24.876181884706238 24.84770150380499 41 24.89890335262715 25.025363590217047 25.207490861271893 24.868242195883912 42 25.889956391387297 24.852820932134094 24.769623875715453 24.48759880076315 43 25.524985128913414 24.152893167340437 24.950855572960993 25.37126613078516 44 25.099464774241024 24.722183421288427 24.74937057314468 25.42898123132587 45 25.19986181888053 24.939102872027792 24.751454547065048 25.109580762026628 46 25.11050075733986 24.63293034994348 24.87522459572769 25.381344296988967 47 25.177118437351382 24.584475172076402 25.09835370814261 25.140052682429605 48 25.8362189616099 25.195793455790266 24.12732741081126 24.840660171788574 49 25.1613145002487 25.17480563902346 24.407309744281598 25.25657011644624 50 25.21466348152075 25.220386932543683 24.464618852230032 25.10033073370554 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 52.0 1 53.0 2 54.0 3 111.5 4 169.0 5 209.5 6 250.0 7 186.0 8 122.0 9 177.0 10 232.0 11 375.5 12 519.0 13 1024.0 14 1529.0 15 1904.0 16 2279.0 17 2273.0 18 2267.0 19 2239.0 20 2211.0 21 2728.5 22 3246.0 23 4075.5 24 4905.0 25 6321.5 26 7738.0 27 9704.0 28 11670.0 29 13551.0 30 15432.0 31 17648.5 32 19865.0 33 23329.5 34 26794.0 35 31341.5 36 35889.0 37 42466.5 38 49044.0 39 55074.5 40 61105.0 41 66942.0 42 72779.0 43 76531.0 44 80283.0 45 87562.5 46 94842.0 47 101840.0 48 108838.0 49 113082.5 50 117327.0 51 115148.5 52 112970.0 53 112183.0 54 111396.0 55 111814.0 56 112232.0 57 108332.5 58 104433.0 59 96093.5 60 87754.0 61 76906.0 62 66058.0 63 56880.0 64 47702.0 65 40416.0 66 33130.0 67 28617.5 68 24105.0 69 21312.0 70 18519.0 71 14591.5 72 10664.0 73 9339.5 74 8015.0 75 5956.5 76 3898.0 77 3373.0 78 2848.0 79 2403.5 80 1959.0 81 1568.5 82 1178.0 83 967.5 84 757.0 85 561.0 86 365.0 87 251.5 88 138.0 89 89.0 90 40.0 91 30.0 92 20.0 93 23.0 94 26.0 95 18.5 96 11.0 97 13.0 98 15.0 99 10.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03175079036302191 2 0.0054507794614629896 3 2.7253897307314947E-4 4 0.0 5 6.813474326828737E-5 6 0.0 7 0.0 8 0.0 9 0.0 10 6.813474326828737E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.7694320287801155E-4 17 0.0 18 1.3626948653657473E-4 19 0.0 20 5.450779461462989E-4 21 0.0 22 0.0 23 0.0 24 6.132126894145863E-4 25 6.813474326828737E-5 26 3.4067371634143685E-4 27 2.7253897307314947E-4 28 0.0011582906355608851 29 2.7253897307314947E-4 30 9.538864057560231E-4 31 4.0880845960972423E-4 32 6.813474326828737E-4 33 4.0880845960972423E-4 34 0.001498964351902322 35 2.7253897307314947E-4 36 4.7694320287801155E-4 37 0.0027253897307314948 38 0.0 39 6.813474326828737E-4 40 2.0440422980486211E-4 41 0.0017033685817071842 42 0.0054507794614629896 43 0.004565027798975253 44 0.005110105745121552 45 0.002793524473999782 46 0.0029297939605363566 47 0.0012264253788291726 48 0.004224354082633817 49 0.0034067371634143684 50 0.0023165812711217703 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1467680.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.334709077851414 #Duplication Level Percentage of deduplicated Percentage of total 1 78.65329537235857 46.66870398933212 2 12.928521941392706 15.342201763983098 3 3.8001086850313164 6.76435029871649 4 1.6147775864062823 3.8324943325940732 5 0.8164328090095586 2.4221401602097594 6 0.48611416234759924 1.7306065440910938 7 0.34354931621071716 1.426907911188038 8 0.2342021264015314 1.111705202835924 9 0.16992187745666162 0.9074038648368002 >10 0.8403554210217684 8.738259909826068 >50 0.05879234884337084 2.417774998075851 >100 0.048039058670975146 5.84268794519664 >500 0.0046190547836098 1.8685425955654411 >1k 0.0012702400654926952 0.9262204835485914 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1601 0.10908372397252808 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 6.813474326828737E-5 7 0.0 0.0 0.0 0.0 6.813474326828737E-5 8 0.0 0.0 0.0 0.0 6.813474326828737E-5 9 0.0 0.0 0.0 0.0 6.813474326828737E-5 10 0.0 0.0 0.0 0.0 1.3626948653657473E-4 11 0.0 0.0 0.0 0.0 1.3626948653657473E-4 12 0.0 0.0 0.0 0.0 2.7253897307314947E-4 13 0.0 0.0 0.0 0.0 3.4067371634143685E-4 14 0.0 0.0 0.0 0.0 4.088084596097242E-4 15 0.0 0.0 0.0 6.813474326828737E-5 4.088084596097242E-4 16 0.0 0.0 0.0 1.3626948653657473E-4 4.7694320287801155E-4 17 0.0 0.0 0.0 2.044042298048621E-4 4.7694320287801155E-4 18 0.0 0.0 0.0 2.044042298048621E-4 6.132126894145863E-4 19 0.0 0.0 0.0 2.7253897307314947E-4 6.132126894145863E-4 20 0.0 0.0 0.0 2.7253897307314947E-4 6.132126894145863E-4 21 0.0 0.0 0.0 4.7694320287801155E-4 6.132126894145863E-4 22 0.0 0.0 0.0 5.450779461462989E-4 6.132126894145863E-4 23 0.0 0.0 0.0 6.813474326828737E-4 8.857516624877357E-4 24 0.0 0.0 0.0 0.0012264253788291726 8.857516624877357E-4 25 0.0 0.0 0.0 0.0014308296086340347 8.857516624877357E-4 26 0.0 0.0 0.0 0.0020440422980486208 9.538864057560231E-4 27 0.0 0.0 0.0 0.0023165812711217703 9.538864057560231E-4 28 0.0 0.0 0.0 0.0030660634470729316 9.538864057560231E-4 29 0.0 0.0 0.0 0.004565027798975253 9.538864057560231E-4 30 0.0 0.0 0.0 0.0067453395835604495 9.538864057560231E-4 31 0.0 0.0 0.0 0.010901558922925979 9.538864057560231E-4 32 0.0 0.0 0.0 0.016352338384388966 0.0010220211490243104 33 0.0 0.0 0.0 0.021258039899705657 0.0010220211490243104 34 0.0 0.0 0.0 0.026776954104436933 0.0010901558922925979 35 0.0 0.0 0.0 0.033931102147607105 0.0010901558922925979 36 0.0 0.0 0.0 0.04251607979941131 0.0010901558922925979 37 0.0 0.0 0.0 0.05593862422326393 0.0010901558922925979 38 0.0 0.0 0.0 0.07378992695955522 0.0011582906355608851 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGCGC 25 0.0023523942 35.201717 40 GGTATCA 660 0.0 28.343407 1 GTATCAA 1645 0.0 27.82752 1 TACACCG 75 5.4759115E-5 20.532236 5 TAATAGG 80 8.993932E-5 19.24897 4 GTATTAC 115 2.0145853E-7 19.137238 1 TCAACGC 2355 0.0 18.776068 4 CAACGCA 2425 0.0 18.41551 5 ATCAACG 2410 0.0 18.347569 3 TATCAAC 2475 0.0 18.132982 2 AACGCAG 2485 0.0 18.059397 6 TACGAAT 275 0.0 17.60146 41 GTTATAT 165 1.6516424E-9 17.339497 1 ATACGAA 290 0.0 16.69047 40 CGCAATA 295 0.0 16.40758 36 CGAATGC 330 0.0 16.00078 43 ATAGGGG 110 5.625132E-5 15.999144 3 CGAGCCG 550 0.0 15.599698 15 TAAACGC 240 3.6379788E-12 15.583563 28 TCGAACG 325 0.0 15.569991 44 >>END_MODULE