##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062325_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2101611 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29727004664517 32.0 32.0 32.0 32.0 32.0 2 31.01184567458012 32.0 32.0 32.0 32.0 32.0 3 31.030778769239408 32.0 32.0 32.0 32.0 32.0 4 31.030228239193647 32.0 32.0 32.0 32.0 32.0 5 31.02803753882141 32.0 32.0 32.0 32.0 32.0 6 34.57852476029103 36.0 36.0 36.0 32.0 36.0 7 34.54122765821077 36.0 36.0 36.0 32.0 36.0 8 34.52811200550435 36.0 36.0 36.0 32.0 36.0 9 34.60142195677506 36.0 36.0 36.0 32.0 36.0 10 34.435994101667724 36.0 36.0 36.0 32.0 36.0 11 34.54435716219605 36.0 36.0 36.0 32.0 36.0 12 34.469930448593956 36.0 36.0 36.0 32.0 36.0 13 34.53003529197363 36.0 36.0 36.0 32.0 36.0 14 34.45782259419084 36.0 36.0 36.0 32.0 36.0 15 34.41894004171086 36.0 36.0 36.0 32.0 36.0 16 34.42083906108219 36.0 36.0 36.0 32.0 36.0 17 34.371169545648556 36.0 36.0 36.0 32.0 36.0 18 34.378975937982815 36.0 36.0 36.0 32.0 36.0 19 34.36438808133379 36.0 36.0 36.0 32.0 36.0 20 34.35430629169718 36.0 36.0 36.0 32.0 36.0 21 34.31467669326055 36.0 36.0 36.0 32.0 36.0 22 34.29891878182975 36.0 36.0 36.0 32.0 36.0 23 34.288295027005475 36.0 36.0 36.0 32.0 36.0 24 34.262369201531584 36.0 36.0 36.0 32.0 36.0 25 33.86890247529158 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 4.0 4 31.0 5 145.0 6 406.0 7 69.0 8 392.0 9 303.0 10 147.0 11 38.0 12 98.0 13 93.0 14 291.0 15 491.0 16 750.0 17 1103.0 18 1434.0 19 1825.0 20 2612.0 21 3401.0 22 4684.0 23 6354.0 24 8743.0 25 12603.0 26 17654.0 27 23670.0 28 32933.0 29 45223.0 30 61653.0 31 88012.0 32 130581.0 33 196542.0 34 470961.0 35 988365.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.87058150650483 17.68677379492604 11.53819983222251 25.904444866346626 2 16.922899037308575 19.772241064936942 37.02560134906224 26.27925854869224 3 18.955557670346405 23.362295393985537 28.376522649409974 29.30562428625809 4 12.727556520626 15.536872781539554 36.049092962266606 35.68647773556785 5 15.025638413878681 36.29650219972022 33.3171819020833 15.360677484317801 6 34.238789128245664 35.59064040698851 16.66934088144341 13.501229583322422 7 30.473610102869248 30.172899983042484 20.61181386362727 18.741676050461 8 27.95893354495651 32.79728903854517 19.493895430397046 19.749881986101272 9 26.82878028911771 14.478752063340075 19.121785298300022 39.57068234924219 10 16.467566425376837 26.206000498366016 30.804927820306176 26.521505255950974 11 37.52816034337512 21.404529288663056 21.927616005367142 19.13969436259468 12 24.30409974157449 24.030237309325425 28.429426585047914 23.236236364052175 13 28.635092237790122 19.38834965795242 25.467025127002348 26.509532977255112 14 23.454448882569125 20.10022698745019 24.859293980902567 31.586030149078116 15 25.240408323704933 27.219372744273578 21.910211666051243 25.630007265970246 16 26.034013187386947 25.945214367687136 23.499912106318487 24.52086033860743 17 23.823829689519528 26.16261647603163 25.144625845089912 24.86892798935893 18 24.864967086694964 25.142392498843662 26.020207659399336 23.972432755062037 19 25.412030078052815 25.296960760219545 25.19155993225389 24.09944922947375 20 25.569150025479708 24.50505069747727 24.556581623176534 25.36921765386649 21 26.907992587629 24.385386141952335 24.297708327677853 24.408912942740816 22 25.78782368143545 24.52753441504193 25.02345776506798 24.661184138454637 23 23.96320452281312 24.596701226515908 25.616734256156864 25.823359994514107 24 24.43535543651368 25.37533432901785 25.222314509307875 24.966995725160594 25 24.547768668249393 24.721550847598888 25.20365471209736 25.52702577205436 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 174.0 1 174.0 2 439.0 3 704.0 4 704.0 5 704.0 6 1529.0 7 2354.0 8 2354.0 9 2354.0 10 2821.5 11 3289.0 12 3289.0 13 3289.0 14 4665.5 15 6042.0 16 6042.0 17 6042.0 18 9969.5 19 13897.0 20 13897.0 21 13897.0 22 22233.0 23 30569.0 24 30569.0 25 30569.0 26 45834.5 27 61100.0 28 61100.0 29 61100.0 30 76054.0 31 91008.0 32 91008.0 33 91008.0 34 113406.5 35 135805.0 36 135805.0 37 135805.0 38 156582.5 39 177360.0 40 177360.0 41 177360.0 42 201149.5 43 224939.0 44 224939.0 45 224939.0 46 246505.5 47 268072.0 48 268072.0 49 268072.0 50 273492.0 51 278912.0 52 278912.0 53 278912.0 54 257646.0 55 236380.0 56 236380.0 57 236380.0 58 218767.0 59 201154.0 60 201154.0 61 201154.0 62 178642.5 63 156131.0 64 156131.0 65 156131.0 66 127642.0 67 99153.0 68 99153.0 69 99153.0 70 75333.0 71 51513.0 72 51513.0 73 51513.0 74 40037.0 75 28561.0 76 28561.0 77 28561.0 78 24451.5 79 20342.0 80 20342.0 81 20342.0 82 14233.0 83 8124.0 84 8124.0 85 8124.0 86 5990.0 87 3856.0 88 3856.0 89 3856.0 90 2527.0 91 1198.0 92 1198.0 93 1198.0 94 701.5 95 205.0 96 205.0 97 205.0 98 487.0 99 769.0 100 769.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 8.5648581017134E-4 2 1.4274763502855666E-4 3 5.234079951047078E-4 4 0.009992334451998966 5 0.031499644796301504 6 0.062142803782431665 7 0.10691797863638894 8 0.1085833677117221 9 0.11733855599347358 10 0.13094716386619598 11 0.13870311870274757 12 0.1307092511411484 13 0.12533242355507274 14 0.11305612694261688 15 0.13256497039651963 16 0.11819504180364492 17 0.12247747085450161 18 0.10982051388196959 19 0.0954981678341044 20 0.09045441806309541 21 0.08936001952787648 22 0.09959026670492305 23 0.07989109307098222 24 0.08959793225292408 25 0.08831320353766706 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2101611.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.57220284896552 #Duplication Level Percentage of deduplicated Percentage of total 1 72.28838821315817 33.666294794879704 2 15.95444704591222 14.860674883306052 3 5.52037775139971 7.712884573233104 4 2.3698609740060834 4.414785840210333 5 1.1839661038103058 2.756995477647646 6 0.6647006884643266 1.8573945178204592 7 0.41433900777235005 1.3507676222749092 8 0.2783999691070256 1.0372559867518503 9 0.18959761620392732 0.7946980777376653 >10 0.9396440300686595 7.784649457870333 >50 0.0829820671662498 2.7300798959172847 >100 0.08861111218770286 8.979940845171884 >500 0.015876515415779224 5.212514069154715 >1k 0.008808905327464603 6.8410639580241375 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGC 3695 0.1758175038101723 No Hit GAATAGGACCGCGGTTCTATTTTGT 3360 0.15987735123198346 No Hit GATTAAGAGGGACGGCCGGGGGCAT 3292 0.15664173817133617 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 3032 0.14427027646886126 No Hit TCGTAGTTCCGACCATAAACGATGC 2975 0.1415580714033187 No Hit ATCAGATACCGTCGTAGTTCCGACC 2930 0.13941685687789035 No Hit GAACTACGACGGTATCTGATCGTCT 2864 0.13627640890726211 No Hit GTATCTGATCGTCTTCGAACCTCCG 2771 0.13185123222137685 No Hit GGGTAGGCACACGCTGAGCCAGTCA 2723 0.12956727006091992 No Hit GTATCAACGCAGAGTACTTTTTTTT 2723 0.12956727006091992 No Hit GAATAACGCCGCCGCATCGCCAGTC 2626 0.1249517631949966 No Hit CTCCTGGTGGTGCCCTTCCGTCAAT 2559 0.12176373267935885 No Hit ACCATACTCCCCCCGGAACCCAAAG 2365 0.11253271894751217 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2339 0.11129557277726468 No Hit GTGTAGCGCGCGTGCAGCCCCGGAC 2282 0.1085833677117221 No Hit CTATTGGAGCTGGAATTACCGCGGC 2245 0.10682281354636991 No Hit GTGCATGGCCGTTCTTAGTTGGTGG 2245 0.10682281354636991 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 4.7582545009518885E-5 11 0.0 0.0 0.0 0.0 4.7582545009518885E-5 12 0.0 0.0 0.0 0.0 3.806603600761511E-4 13 0.0 0.0 0.0 0.0 3.806603600761511E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 790 0.0 13.704324 1 TAGATTA 80 2.000832E-6 13.062222 5 CGGTCCA 475 0.0 13.002201 10 ATCGCCA 445 0.0 12.809326 16 CGGACCA 675 0.0 12.808966 9 AAGACGG 730 0.0 12.753152 5 GTATCAA 2075 0.0 12.586194 1 GGTCCAA 510 0.0 12.482507 11 CGAACGA 160 0.0 12.469078 16 GCGTTAT 245 0.0 12.4040575 1 TCGCGTA 300 0.0 12.351502 9 CGCCAGT 470 0.0 12.32923 18 TAGGGGC 85 3.946112E-6 12.293856 4 GCCGATT 70 1.0902561E-4 12.215481 12 CGCAAGA 630 0.0 12.211699 2 CAAGACG 755 0.0 12.205038 4 CGCATCG 445 0.0 11.955655 13 CGGCCGA 80 2.8625176E-5 11.87701 10 CGCGTAA 320 0.0 11.87701 10 GCGTAAC 320 0.0 11.87701 11 >>END_MODULE