##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062325_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2101611 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24707188913648 32.0 32.0 32.0 32.0 32.0 2 31.332046225490824 32.0 32.0 32.0 32.0 32.0 3 31.500846731388446 32.0 32.0 32.0 32.0 32.0 4 31.59723897524328 32.0 32.0 32.0 32.0 32.0 5 31.545900264130708 32.0 32.0 32.0 32.0 32.0 6 35.18063761561964 36.0 36.0 36.0 36.0 36.0 7 35.178707667594054 36.0 36.0 36.0 36.0 36.0 8 35.1212027344737 36.0 36.0 36.0 36.0 36.0 9 35.23291037209074 36.0 36.0 36.0 36.0 36.0 10 35.09254234013811 36.0 36.0 36.0 36.0 36.0 11 35.23007350075728 36.0 36.0 36.0 36.0 36.0 12 35.12986799174538 36.0 36.0 36.0 36.0 36.0 13 35.187467138304854 36.0 36.0 36.0 36.0 36.0 14 35.138478053264855 36.0 36.0 36.0 36.0 36.0 15 35.11148352383005 36.0 36.0 36.0 36.0 36.0 16 35.11743705186164 36.0 36.0 36.0 36.0 36.0 17 35.09777499261281 36.0 36.0 36.0 36.0 36.0 18 35.09775262881666 36.0 36.0 36.0 36.0 36.0 19 35.086698251960044 36.0 36.0 36.0 36.0 36.0 20 35.09514129874653 36.0 36.0 36.0 36.0 36.0 21 35.078745781212604 36.0 36.0 36.0 36.0 36.0 22 35.069609456745326 36.0 36.0 36.0 36.0 36.0 23 35.024629676947825 36.0 36.0 36.0 36.0 36.0 24 35.00789870247158 36.0 36.0 36.0 36.0 36.0 25 34.993273731437455 36.0 36.0 36.0 36.0 36.0 26 34.94257119895166 36.0 36.0 36.0 32.0 36.0 27 34.941714713141494 36.0 36.0 36.0 32.0 36.0 28 34.91705125258671 36.0 36.0 36.0 32.0 36.0 29 34.89424684206544 36.0 36.0 36.0 32.0 36.0 30 34.8735303536192 36.0 36.0 36.0 32.0 36.0 31 34.88125775892875 36.0 36.0 36.0 32.0 36.0 32 34.84767399866103 36.0 36.0 36.0 32.0 36.0 33 34.82096829527443 36.0 36.0 36.0 32.0 36.0 34 34.81324993064844 36.0 36.0 36.0 32.0 36.0 35 34.798687292748276 36.0 36.0 36.0 32.0 36.0 36 34.77124025331044 36.0 36.0 36.0 32.0 36.0 37 34.76343528845253 36.0 36.0 36.0 32.0 36.0 38 34.73763888750106 36.0 36.0 36.0 32.0 36.0 39 34.73416964414442 36.0 36.0 36.0 32.0 36.0 40 34.70920213112703 36.0 36.0 36.0 32.0 36.0 41 34.68501354437144 36.0 36.0 36.0 32.0 36.0 42 34.651562063578844 36.0 36.0 36.0 32.0 36.0 43 34.65417767607802 36.0 36.0 36.0 32.0 36.0 44 34.592634412362706 36.0 36.0 36.0 32.0 36.0 45 34.5848227859485 36.0 36.0 36.0 32.0 36.0 46 34.56869039988847 36.0 36.0 36.0 32.0 36.0 47 34.54592595870501 36.0 36.0 36.0 32.0 36.0 48 34.52080380241634 36.0 36.0 36.0 32.0 36.0 49 34.50273385512352 36.0 36.0 36.0 32.0 36.0 50 34.05818155691039 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 22.0 21 53.0 22 115.0 23 359.0 24 930.0 25 2221.0 26 4962.0 27 9468.0 28 16933.0 29 27776.0 30 42400.0 31 64344.0 32 99896.0 33 174652.0 34 395221.0 35 1262256.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.30509729035845 18.37500517615835 11.992266462444414 26.327631071038788 2 16.294902236962947 20.297452783950586 36.71526664160532 26.69237833748114 3 18.365547540003874 23.846443367914773 28.58167242336705 29.206336668714307 4 12.421001042058231 16.008821808042406 36.218042358001725 35.35213479189764 5 14.668509062809434 36.75908624383866 33.01453028176955 15.557874411582354 6 34.42285035620412 35.803938325203035 16.444439580434754 13.328771738158093 7 30.458824206763286 30.261023567158716 20.61989587987501 18.66025634620298 8 28.04924412748125 32.91603441359985 19.32731604469143 19.707405414227466 9 27.074039867511164 14.181692044817048 18.95450680454185 39.78976128312994 10 16.433115563782053 26.187922592678948 30.81865807642712 26.560303767111883 11 37.75950925266379 21.264258704393914 21.853711271971836 19.12252077097046 12 24.36316711322885 23.953671730876934 28.375517638611527 23.307643517282695 13 28.781016087182643 19.250898477406142 25.42606600365148 26.542019431759734 14 23.570394330825255 19.913009591213598 24.769997873060237 31.746598204900906 15 25.35997384863326 27.151028425336566 21.764541582624 25.724456143406176 16 26.16541024239163 25.806873718535268 23.354693259751265 24.67302277932184 17 24.016385525199478 26.20913194687314 24.982977344522844 24.791505183404542 18 25.039826647024565 25.025218784854264 25.85991298091747 24.075041587203703 19 25.65898256147308 25.083709592307997 25.10902350625306 24.148284339965866 20 25.86695520763149 24.284928492849282 24.457796125633323 25.3903201738859 21 27.102970054876952 24.292935276794804 24.258628261842937 24.34546640648531 22 25.91107488493351 24.509150361318056 24.943245919439896 24.63652883430854 23 24.10033260214788 24.405812686464188 25.584718382573364 25.909136328814576 24 24.66939348836501 25.175628761434186 25.20517778902851 24.949799961172292 25 24.86773216876419 24.483787882320527 25.10298071904024 25.54549922987504 26 24.473175951880542 25.748678508738333 25.58309062177776 24.195054917603372 27 25.4130299585602 24.621158230170018 24.879199354016908 25.086612457252865 28 24.513378724513853 24.82266938779006 25.683258762561362 24.98069312513472 29 24.49365983362208 24.85129194361822 25.65929498510897 24.995753237650725 30 24.389342144456617 25.210674224133584 25.894110448014025 24.505873183395778 31 25.300604015413004 24.91627815352288 24.598044729687164 25.185073101376947 32 25.056302367863708 24.68306275364615 24.626058539236077 25.63457633925406 33 24.36140534362514 24.461804704685512 25.507290373509417 25.669499578179934 34 25.338980470080834 24.736819065129552 25.46607435491883 24.458126109870783 35 26.100205176226964 24.25633134247681 25.43999642178751 24.203467059508718 36 24.335021405028243 25.21391943030316 24.983810023653305 25.46724914101529 37 25.63297794890877 25.058932019524416 24.93692822617714 24.371161805389676 38 24.58709057004365 24.523187212095866 25.50072301677142 25.388999201089067 39 25.625403858580263 24.514774919323447 24.622502262559703 25.23731895953658 40 25.595199859155265 24.843203170909852 25.33482742951221 24.226769540422676 41 24.359890635393896 25.49284019653653 25.75954251867868 24.387726649390892 42 26.198768409967876 25.42356428303254 24.822853651491712 23.55481365550787 43 25.278988010605634 24.39082304080277 25.271945502406822 25.05824344618477 44 24.734206187382078 25.105030370657637 24.85397578436714 25.306787657593137 45 25.01412042929912 25.50090051937485 24.879982298905816 24.60499675242022 46 24.652532094000605 25.20350349097647 24.90643859493015 25.237525820092777 47 24.730048986836124 24.86456650575637 25.598060511471104 24.8073239959364 48 25.877100735370394 25.544580462007133 24.211596715910247 24.36672208671223 49 24.653999943850085 25.72403649363769 24.51686091523409 25.105102647278134 50 25.13535067458833 25.52286900605164 24.702247549222538 24.63953277013749 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 68.0 1 49.5 2 31.0 3 89.0 4 147.0 5 175.5 6 204.0 7 189.5 8 175.0 9 245.5 10 316.0 11 459.5 12 603.0 13 1139.5 14 1676.0 15 2185.5 16 2695.0 17 3079.0 18 3463.0 19 3834.0 20 4205.0 21 5263.0 22 6321.0 23 7334.5 24 8348.0 25 10893.5 26 13439.0 27 17055.5 28 20672.0 29 24477.5 30 28283.0 31 31539.0 32 34795.0 33 39371.0 34 43947.0 35 50981.5 36 58016.0 37 69619.0 38 81222.0 39 89643.5 40 98065.0 41 106139.0 42 114213.0 43 116313.5 44 118414.0 45 128685.0 46 138956.0 47 147709.0 48 156462.0 49 161673.5 50 166885.0 51 156720.5 52 146556.0 53 144724.5 54 142893.0 55 146333.0 56 149773.0 57 145571.5 58 141370.0 59 127943.0 60 114516.0 61 100404.0 62 86292.0 63 74155.0 64 62018.0 65 52938.0 66 43858.0 67 39045.0 68 34232.0 69 32455.5 70 30679.0 71 23650.0 72 16621.0 73 14841.5 74 13062.0 75 9352.5 76 5643.0 77 5011.5 78 4380.0 79 3876.5 80 3373.0 81 2654.0 82 1935.0 83 1669.5 84 1404.0 85 1110.5 86 817.0 87 570.5 88 324.0 89 213.0 90 102.0 91 74.0 92 46.0 93 40.0 94 34.0 95 27.5 96 21.0 97 22.0 98 23.0 99 20.5 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03007216844601594 2 0.004805837045961408 3 9.516509001903777E-5 4 4.7582545009518885E-5 5 0.0 6 3.330778150666322E-4 7 0.0 8 0.0 9 0.0 10 4.7582545009518885E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.709905401142266E-4 17 0.0 18 1.4274763502855666E-4 19 0.0 20 1.4274763502855666E-4 21 0.0 22 0.0 23 4.7582545009518885E-5 24 9.040683551808589E-4 25 1.9033018003807554E-4 26 3.806603600761511E-4 27 3.806603600761511E-4 28 0.001332311260266529 29 4.758254500951889E-4 30 0.0011895636252379721 31 4.2824290508567E-4 32 5.709905401142266E-4 33 1.9033018003807554E-4 34 7.137381751427833E-4 35 1.4274763502855666E-4 36 9.516509001903777E-5 37 0.0017605541653521986 38 0.0 39 4.2824290508567E-4 40 2.854952700571133E-4 41 8.08903265161821E-4 42 0.0047582545009518884 43 0.004139681415828143 44 0.0036162734207234354 45 0.002188797070437869 46 0.0023791272504759442 47 0.0012371461702474912 48 0.004044516325809106 49 0.004472759230894775 50 0.0015702239853141234 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2101611.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.312962751761916 #Duplication Level Percentage of deduplicated Percentage of total 1 72.28214178010994 34.92164423440025 2 16.124502161956254 15.580449446825941 3 5.498989111288135 7.970173683180241 4 2.362574280743714 4.565718528953671 5 1.1627825233109153 2.8088734368559987 6 0.6660343856259737 1.9306856678484177 7 0.41842218626835487 1.415065084978567 8 0.26353753479718955 1.0185823281878224 9 0.18203329029545942 0.7915110816262675 >10 0.8655467431025832 7.322304285880585 >50 0.07177836423738798 2.44963328202487 >100 0.08037830262930443 8.488075907860576 >500 0.013163495997391713 4.401134128813509 >1k 0.008115839637489628 6.336148902563211 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3780 0.1798620201359814 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 3495 0.16630099480826852 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 3413 0.16239922611748794 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 3034 0.14436544155888031 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 3011 0.14327104302366137 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2946 0.14017817759804263 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2748 0.1307568336861579 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 2717 0.1292817747908628 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 2605 0.1239525297497967 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2602 0.12380978211476813 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2403 0.11434085565787389 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 2329 0.11081974732716948 No Hit CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACC 2328 0.11077216478215997 No Hit ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG 2295 0.10920194079684585 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAT 2205 0.10491951174598915 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG 2117 0.10073224778515148 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAAT 2104 0.10011367470002773 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 4.7582545009518885E-5 0.0 5 0.0 0.0 0.0 4.7582545009518885E-5 0.0 6 0.0 0.0 0.0 4.7582545009518885E-5 9.516509001903777E-5 7 0.0 0.0 0.0 4.7582545009518885E-5 9.516509001903777E-5 8 0.0 0.0 0.0 4.7582545009518885E-5 9.516509001903777E-5 9 0.0 0.0 0.0 4.7582545009518885E-5 9.516509001903777E-5 10 0.0 0.0 0.0 4.7582545009518885E-5 9.516509001903777E-5 11 0.0 0.0 0.0 4.7582545009518885E-5 9.516509001903777E-5 12 0.0 0.0 0.0 4.7582545009518885E-5 2.3791272504759443E-4 13 0.0 0.0 0.0 4.7582545009518885E-5 2.3791272504759443E-4 14 0.0 0.0 0.0 4.7582545009518885E-5 2.3791272504759443E-4 15 0.0 0.0 0.0 4.7582545009518885E-5 3.806603600761511E-4 16 0.0 0.0 0.0 4.7582545009518885E-5 3.806603600761511E-4 17 0.0 0.0 0.0 4.7582545009518885E-5 3.806603600761511E-4 18 0.0 0.0 0.0 4.7582545009518885E-5 3.806603600761511E-4 19 0.0 0.0 0.0 4.7582545009518885E-5 3.806603600761511E-4 20 0.0 0.0 0.0 1.9033018003807554E-4 4.7582545009518885E-4 21 0.0 0.0 0.0 1.9033018003807554E-4 4.7582545009518885E-4 22 0.0 0.0 0.0 2.3791272504759443E-4 4.7582545009518885E-4 23 0.0 0.0 0.0 4.2824290508567E-4 4.7582545009518885E-4 24 0.0 0.0 0.0 7.613207201523022E-4 4.7582545009518885E-4 25 0.0 0.0 0.0 9.516509001903777E-4 4.7582545009518885E-4 26 0.0 0.0 0.0 0.0010468159902094155 5.234079951047078E-4 27 0.0 0.0 0.0 0.0011419810802284533 5.234079951047078E-4 28 0.0 0.0 0.0 0.0014274763502855666 5.234079951047078E-4 29 0.0 0.0 0.0 0.0024742923404949824 5.234079951047078E-4 30 0.0 0.0 0.0 0.004615506865923332 5.234079951047078E-4 31 0.0 0.0 0.0 0.009135848641827626 5.234079951047078E-4 32 0.0 0.0 0.0 0.01413201586782711 6.185730851237456E-4 33 0.0 0.0 0.0 0.019556425998912264 6.185730851237456E-4 34 0.0 0.0 0.0 0.025123583765025975 6.185730851237456E-4 35 0.0 0.0 0.0 0.03164239243133006 6.185730851237456E-4 36 0.0 0.0 0.0 0.04058791089311961 6.185730851237456E-4 37 0.0 0.0 0.0 0.053720693315746824 6.185730851237456E-4 38 0.0 0.0 0.0 0.07170689532934496 6.661556301332645E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2375 0.0 25.389112 1 GGTATCA 1080 0.0 24.859743 1 CGCAATA 655 0.0 20.823606 36 TCTAGCG 710 0.0 19.52082 28 CTAGCGG 715 0.0 19.38385 29 ACCGTCG 810 0.0 19.283188 8 TAGCGGC 720 0.0 19.24924 30 ATACCGT 840 0.0 19.118292 6 TACCGTC 820 0.0 19.048029 7 CGTCGTA 835 0.0 18.705849 10 ATACGAA 720 0.0 18.639484 40 GCGCAAT 740 0.0 18.431705 35 TACGAAT 735 0.0 18.259087 41 CCGTCGT 860 0.0 18.162073 9 CAATACG 775 0.0 17.600563 38 AATCACG 75 0.0012916427 17.599304 34 TAGGACG 150 9.61154E-9 17.599304 4 TCAACGC 3475 0.0 17.156157 4 TACGCTA 745 0.0 17.12684 9 ATCAACG 3495 0.0 17.057981 3 >>END_MODULE