##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062323_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 269783 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.01957869843541 32.0 32.0 32.0 32.0 32.0 2 31.37814095031933 32.0 32.0 32.0 32.0 32.0 3 31.544196632108026 32.0 32.0 32.0 32.0 32.0 4 31.644651442084935 32.0 32.0 32.0 32.0 32.0 5 31.63513268071005 32.0 32.0 32.0 32.0 32.0 6 35.226011275729014 36.0 36.0 36.0 36.0 36.0 7 35.21962836798464 36.0 36.0 36.0 36.0 36.0 8 35.182294659040785 36.0 36.0 36.0 36.0 36.0 9 35.21736729148983 36.0 36.0 36.0 36.0 36.0 10 35.15189986025806 36.0 36.0 36.0 36.0 36.0 11 35.25745135905524 36.0 36.0 36.0 36.0 36.0 12 35.18091206636445 36.0 36.0 36.0 36.0 36.0 13 35.23176775408384 36.0 36.0 36.0 36.0 36.0 14 35.18708369319045 36.0 36.0 36.0 36.0 36.0 15 35.19382614916433 36.0 36.0 36.0 36.0 36.0 16 35.1829952220859 36.0 36.0 36.0 36.0 36.0 17 35.171230210947314 36.0 36.0 36.0 36.0 36.0 18 35.16733448734724 36.0 36.0 36.0 36.0 36.0 19 35.115663329416606 36.0 36.0 36.0 36.0 36.0 20 35.07369997368255 36.0 36.0 36.0 36.0 36.0 21 35.05751659667214 36.0 36.0 36.0 36.0 36.0 22 35.06138266680999 36.0 36.0 36.0 36.0 36.0 23 35.07768836435209 36.0 36.0 36.0 36.0 36.0 24 35.06184229547451 36.0 36.0 36.0 36.0 36.0 25 35.045206703165135 36.0 36.0 36.0 36.0 36.0 26 35.03410889492666 36.0 36.0 36.0 36.0 36.0 27 35.01817757234518 36.0 36.0 36.0 36.0 36.0 28 34.97171801040095 36.0 36.0 36.0 36.0 36.0 29 34.94385116927308 36.0 36.0 36.0 36.0 36.0 30 34.92027666680258 36.0 36.0 36.0 36.0 36.0 31 34.874854976036296 36.0 36.0 36.0 36.0 36.0 32 34.83927082136384 36.0 36.0 36.0 32.0 36.0 33 34.794597880518786 36.0 36.0 36.0 32.0 36.0 34 34.75611880659641 36.0 36.0 36.0 32.0 36.0 35 34.7331633201499 36.0 36.0 36.0 32.0 36.0 36 34.68866459339543 36.0 36.0 36.0 32.0 36.0 37 34.64191220351171 36.0 36.0 36.0 32.0 36.0 38 34.60398171864054 36.0 36.0 36.0 32.0 36.0 39 34.491220721839404 36.0 36.0 36.0 32.0 36.0 40 34.5139056204431 36.0 36.0 36.0 32.0 36.0 41 34.43379679223673 36.0 36.0 36.0 32.0 36.0 42 34.398253411074826 36.0 36.0 36.0 32.0 36.0 43 34.36010423191973 36.0 36.0 36.0 32.0 36.0 44 34.2248473773366 36.0 36.0 36.0 32.0 36.0 45 34.15124007072351 36.0 36.0 36.0 32.0 36.0 46 33.96895282504828 36.0 36.0 36.0 32.0 36.0 47 33.89660949726262 36.0 36.0 36.0 32.0 36.0 48 33.79221448349229 36.0 36.0 36.0 32.0 36.0 49 33.716624101592764 36.0 36.0 36.0 27.0 36.0 50 33.35810632990218 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 9.0 21 18.0 22 28.0 23 92.0 24 200.0 25 445.0 26 958.0 27 1943.0 28 3247.0 29 4955.0 30 6936.0 31 9684.0 32 13266.0 33 20327.0 34 41302.0 35 166371.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.706865802246206 21.93148658319089 13.006722308944415 23.354925305618483 2 13.946005656691465 22.082596591898994 41.864706471091935 22.106691280317605 3 17.696074252269415 27.46244203674805 30.619053090817435 24.222430620165095 4 10.317180845346074 17.93923264253122 39.9246802059433 31.81890630617941 5 10.622240838006842 40.607080505443264 35.28354269913226 13.487135957417628 6 28.175607803308583 41.17012561947936 17.90624316580363 12.748023411408429 7 25.958270165280982 34.27013562752286 21.456874599214927 18.314719607981228 8 24.901865573442358 37.04051033608493 19.6691414952017 18.388482595271014 9 25.94418477072314 14.84341118602729 21.754891894596767 37.4575121486528 10 15.568067669200802 28.28050692593677 32.825270680509895 23.326154724352534 11 32.3915887954393 24.340303132517615 25.133162578813344 18.134945493229743 12 23.241642357005446 27.49246616725294 31.167642142017844 18.09824933372377 13 27.32751878361498 22.8813527909468 28.228613367039436 21.562515058398787 14 20.544659967455324 23.555598388334328 28.633383126438655 27.26635851777169 15 22.895067517226806 31.259197206643858 25.20025353710204 20.64548173902729 16 20.996367410482616 29.126325153829047 28.53213729705686 21.345170138631477 17 18.382922571103443 29.22793504409099 29.37212500417002 23.017017380635547 18 18.44940896504943 28.074623490905587 33.25845778613023 20.217509757914755 19 22.58815418317685 26.41752816152241 30.27210758276096 20.72221007253978 20 22.18078974583276 27.804939525470473 30.818101956016502 19.196168772680267 21 22.607428933624433 25.85300037437496 29.69275306449999 21.84681762750062 22 21.711894374367546 28.203037255868608 30.390721431669153 19.694346938094693 23 21.169236015612547 27.621088059662767 31.081276433281563 20.128399491443123 24 22.070041737402793 27.4010126694887 30.66883631969516 19.860109273413347 25 21.253535274908167 27.629076917944555 31.565973882519526 19.551413924627752 26 19.077625638478477 28.68908970946913 32.77535195083438 19.45793270121802 27 19.116246140387943 28.991663608630702 31.594144880477128 20.297945370504227 28 19.29170342583051 28.455670301808176 31.37218560721196 20.880440665149347 29 20.142263539685892 27.12051627060468 30.58369566426101 22.15352452544842 30 20.018311352297076 27.71612214487467 31.167107770092446 21.098458732735807 31 21.53524525448419 26.895889628995373 30.586290361441314 20.98257475507912 32 19.077254968826683 28.636825288566325 31.285259950626802 21.00065979198019 33 20.19445329933057 28.481885374116878 31.430933123781422 19.892728202771124 34 19.82793450984317 27.847402152115976 32.77992149187675 19.54474184616411 35 20.05982586004307 29.160844085802296 30.65389590893422 20.125434145220417 36 19.134708764854587 28.554536625868295 31.066564856068972 21.244189753208147 37 20.442591048095636 27.909554258178108 29.44601983134093 22.201834862385322 38 20.224031907125354 29.88142321791959 30.09085079489812 19.803694080056935 39 20.835202146942496 28.055556585204926 29.614981151238606 21.49426011661397 40 21.814731207905673 28.42861432050441 30.605935925806488 19.150718545783434 41 21.54051449329083 27.68144413966936 31.15835124916599 19.619690117873823 42 20.131150700977884 30.490869864994107 29.47443339783368 19.90354603619433 43 19.007072743987425 30.075472257643604 30.52289374573708 20.394561252631892 44 19.237726672894148 29.76587636967513 30.160283498658124 20.836113458772594 45 19.891094026852105 29.734147842267973 29.59847872663785 20.77627940424207 46 21.465824971364814 28.400544161202195 28.17591085838835 21.95772000904464 47 21.70220810367004 29.581249837830224 27.906916401943814 20.809625656555923 48 20.145530299660454 30.110982607535252 27.410924780926116 22.332562311878178 49 21.065273880439335 28.848171226707098 28.901920517772485 21.18463437508109 50 20.146564953406134 30.28601294397616 27.90368376961798 21.663738332999728 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 314.0 1 174.5 2 35.0 3 117.0 4 199.0 5 221.0 6 243.0 7 203.0 8 163.0 9 214.5 10 266.0 11 458.0 12 650.0 13 1157.5 14 1665.0 15 2370.0 16 3075.0 17 3391.5 18 3708.0 19 3622.5 20 3537.0 21 3523.5 22 3510.0 23 3195.5 24 2881.0 25 3410.5 26 3940.0 27 5583.0 28 7226.0 29 8464.5 30 9703.0 31 10495.5 32 11288.0 33 12999.5 34 14711.0 35 16722.5 36 18734.0 37 20134.5 38 21535.0 39 21084.5 40 20634.0 41 20530.5 42 20427.0 43 17937.5 44 15448.0 45 15487.0 46 15526.0 47 14804.5 48 14083.0 49 13298.0 50 12513.0 51 12695.5 52 12878.0 53 11718.0 54 10558.0 55 10157.5 56 9757.0 57 9066.5 58 8376.0 59 7391.5 60 6407.0 61 5773.5 62 5140.0 63 4205.5 64 3271.0 65 2767.5 66 2264.0 67 1870.0 68 1476.0 69 1322.5 70 1169.0 71 984.5 72 800.0 73 731.5 74 663.0 75 536.0 76 409.0 77 331.5 78 254.0 79 216.5 80 179.0 81 136.0 82 93.0 83 69.0 84 45.0 85 28.0 86 11.0 87 10.5 88 10.0 89 7.0 90 4.0 91 2.5 92 1.0 93 1.5 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0311361353384016 2 0.005189355889733601 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.001112004833514343 17 0.0 18 7.413365556762287E-4 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 3.7066827783811433E-4 25 7.413365556762287E-4 26 3.7066827783811433E-4 27 7.413365556762287E-4 28 0.003336014500543029 29 7.413365556762287E-4 30 0.0018533413891905718 31 7.413365556762287E-4 32 3.7066827783811433E-4 33 3.7066827783811433E-4 34 7.413365556762287E-4 35 0.0 36 3.7066827783811433E-4 37 0.0029653462227049146 38 0.0 39 0.0014826731113524573 40 7.413365556762287E-4 41 0.001112004833514343 42 0.006301360723247944 43 0.0055600241675717145 44 0.0040773510562192574 45 0.003336014500543029 46 0.0037066827783811436 47 0.0014826731113524573 48 0.0040773510562192574 49 0.004448019334057372 50 0.0018533413891905718 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 269783.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.002303841034745 #Duplication Level Percentage of deduplicated Percentage of total 1 63.15249367214515 24.63092746520029 2 17.554691586976194 13.693468302218037 3 7.211478205598246 8.437927923532285 4 3.7189810346425483 5.801953131686977 5 2.061615517424379 4.020387740698885 6 1.3875719558965198 3.2471101815104957 7 0.896834001635007 2.4485014558717717 8 0.6310672966253976 1.9690462757699325 9 0.46185352509835315 1.6212016364345043 >10 2.5690600887533943 18.646923508051305 >50 0.2289360013963589 6.219652758565928 >100 0.12243099205109627 8.458898567904189 >500 0.0029861217573438114 0.8040010525553984 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 907 0.3361961279991697 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 633 0.23463301987152635 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 531 0.1968248555320387 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 424 0.15716334980336047 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 404 0.1497499842465982 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 337 0.12491520963144452 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 334 0.1238032047979302 No Hit CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTAATTGTCGA 332 0.12306186824225396 No Hit GTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGGGCAGGCAGTGCCTC 311 0.11527783440765356 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 300 0.1112004833514343 No Hit GACTATAGGCAATAATCACACTATAAATAATCCACCTATAACTTCTCTGT 298 0.11045914679575806 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 296 0.10971781024008184 No Hit CTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGT 290 0.10749380057305316 No Hit GTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATGCTACCTTTGCAC 287 0.1063817957395388 No Hit GTCCTAGACAGTCCTTGAAAAACCGACGGAACGTATTACTCTCATGCCTG 287 0.1063817957395388 No Hit CTGTTAGTATGAGTAACAAGAATTCCAATTCTCCAGGCATACGCGTATAA 286 0.10601112746170069 No Hit CACTATAAATAATCCACCTATAACTTCTCTGTTAACCCAACACCGGAATG 277 0.10267511296115767 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 3.7066827783811433E-4 0.0 22 0.0 0.0 0.0 3.7066827783811433E-4 0.0 23 0.0 0.0 0.0 0.0014826731113524573 0.0 24 0.0 0.0 0.0 0.004448019334057372 0.0 25 0.0 0.0 0.0 0.006301360723247944 0.0 26 0.0 0.0 0.0 0.006672029001086058 0.0 27 0.0 0.0 0.0 0.008154702112438515 0.0 28 0.0 0.0 0.0 0.010749380057305316 0.0 29 0.0 0.0 0.0 0.013344058002172116 0.0 30 0.0 0.0 0.0 0.021869428392448747 0.0 31 0.0 0.0 0.0 0.04188551539570692 0.0 32 0.0 0.0 0.0 0.06153093412112698 0.0 33 0.0 0.0 0.0 0.07598699695681344 0.0 34 0.0 0.0 0.0 0.08970172323682367 0.0 35 0.0 0.0 0.0 0.11194181990711052 0.0 36 0.0 0.0 0.0 0.14048327730064533 0.0 37 0.0 0.0 0.0 0.18273946097419036 0.0 38 0.0 0.0 0.0 0.22944366398179278 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGAGG 20 7.848524E-4 43.99685 4 ACCGACG 30 1.2990033E-4 36.66404 22 CGACGGA 25 0.0023482533 35.204002 24 CGGATGC 45 1.0338317E-6 34.219772 14 CGGAACG 30 0.005734016 29.33667 27 GACGGAA 30 0.005734016 29.33667 25 CCGACGG 30 0.005734016 29.33667 23 ACGAAAG 55 4.9450737E-6 27.997993 22 TTAATCC 40 7.0132135E-4 27.50313 41 GATGCAA 125 0.0 26.39811 16 CGAAAGT 60 9.707794E-6 25.669586 23 GGATGCA 60 9.721776E-6 25.66483 15 ATACATG 95 9.513315E-10 25.481308 1 ATGCAAC 140 0.0 25.141056 17 TTTCCCC 45 0.0013959854 24.442694 10 CCGGATG 65 1.807628E-5 23.690609 13 TTTCAAT 75 2.055669E-6 23.464987 34 TGCAACG 85 2.3402208E-7 23.29245 18 GTCCTAC 365 0.0 22.910963 1 CCTACAG 360 0.0 22.609491 3 >>END_MODULE