##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062319_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 987013 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.247553983584815 32.0 32.0 32.0 32.0 32.0 2 31.447142033590236 32.0 32.0 32.0 32.0 32.0 3 31.561493111032984 32.0 32.0 32.0 32.0 32.0 4 31.641921636290505 32.0 32.0 32.0 32.0 32.0 5 31.6285124917301 32.0 32.0 32.0 32.0 32.0 6 35.26625586491769 36.0 36.0 36.0 36.0 36.0 7 35.256427220310165 36.0 36.0 36.0 36.0 36.0 8 35.21758274713707 36.0 36.0 36.0 36.0 36.0 9 35.28775304884535 36.0 36.0 36.0 36.0 36.0 10 35.18250418180916 36.0 36.0 36.0 36.0 36.0 11 35.29067702249109 36.0 36.0 36.0 36.0 36.0 12 35.20960108934735 36.0 36.0 36.0 36.0 36.0 13 35.25281936509448 36.0 36.0 36.0 36.0 36.0 14 35.21375503666112 36.0 36.0 36.0 36.0 36.0 15 35.1952902342725 36.0 36.0 36.0 36.0 36.0 16 35.200575878939794 36.0 36.0 36.0 36.0 36.0 17 35.186070497551704 36.0 36.0 36.0 36.0 36.0 18 35.181645023925725 36.0 36.0 36.0 36.0 36.0 19 35.1781861029186 36.0 36.0 36.0 36.0 36.0 20 35.169913668816925 36.0 36.0 36.0 36.0 36.0 21 35.16021673473399 36.0 36.0 36.0 36.0 36.0 22 35.14987036644907 36.0 36.0 36.0 36.0 36.0 23 35.12556065624262 36.0 36.0 36.0 36.0 36.0 24 35.10691551175111 36.0 36.0 36.0 36.0 36.0 25 35.09643743294161 36.0 36.0 36.0 36.0 36.0 26 35.050717670385296 36.0 36.0 36.0 36.0 36.0 27 35.04086876262015 36.0 36.0 36.0 36.0 36.0 28 35.022371539179325 36.0 36.0 36.0 36.0 36.0 29 35.00099390788166 36.0 36.0 36.0 36.0 36.0 30 34.98118869761594 36.0 36.0 36.0 36.0 36.0 31 34.984903947567055 36.0 36.0 36.0 36.0 36.0 32 34.96244831628358 36.0 36.0 36.0 36.0 36.0 33 34.933726303503605 36.0 36.0 36.0 36.0 36.0 34 34.916177395839775 36.0 36.0 36.0 36.0 36.0 35 34.90749463279612 36.0 36.0 36.0 36.0 36.0 36 34.892959869829475 36.0 36.0 36.0 32.0 36.0 37 34.87322355429969 36.0 36.0 36.0 32.0 36.0 38 34.86750934384856 36.0 36.0 36.0 32.0 36.0 39 34.84779025200276 36.0 36.0 36.0 32.0 36.0 40 34.83293431798771 36.0 36.0 36.0 32.0 36.0 41 34.80135013419276 36.0 36.0 36.0 32.0 36.0 42 34.77419041086591 36.0 36.0 36.0 32.0 36.0 43 34.75945909527027 36.0 36.0 36.0 32.0 36.0 44 34.7208152273577 36.0 36.0 36.0 32.0 36.0 45 34.69443158296801 36.0 36.0 36.0 32.0 36.0 46 34.67968709631991 36.0 36.0 36.0 32.0 36.0 47 34.64386082047552 36.0 36.0 36.0 32.0 36.0 48 34.62034643920597 36.0 36.0 36.0 32.0 36.0 49 34.60145813682292 36.0 36.0 36.0 32.0 36.0 50 34.18971280013536 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 16.0 21 45.0 22 92.0 23 236.0 24 559.0 25 1313.0 26 2585.0 27 4867.0 28 8245.0 29 12738.0 30 18821.0 31 27133.0 32 40557.0 33 67743.0 34 154090.0 35 647969.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.36682382224528 17.60277609992014 11.613972928161118 26.41642714967346 2 16.458893547347753 19.88887245256714 36.64939501952432 27.002838980560785 3 19.07538930709922 23.078793527927782 28.177526063565715 29.66829110140728 4 12.889495883032948 15.631607689057795 34.847666646741224 36.63122978116803 5 14.648439280941588 36.51714820372173 33.154071932183264 15.680340583153413 6 35.30109056424846 34.48580159106475 16.16748327274643 14.045624571940362 7 30.839715383687956 30.16252065575631 19.813112897195882 19.184651063359855 8 28.41634304715338 32.984975881776634 18.834605015334144 19.764076055735842 9 26.933079908775266 14.416122178735236 18.564395808363212 40.08640210412629 10 16.57436789015736 26.712745133797767 30.919988814725656 25.792898161319215 11 37.59545213690195 21.28634577254808 21.43061945486027 19.6875826356897 12 24.64536941256093 23.63747995213842 28.230631207491697 23.486519427808954 13 29.585831189660116 19.34756685068991 24.846683883596267 26.219918076053712 14 23.637682583714703 19.34057606130821 24.935335198219274 32.08640615675781 15 25.28771150937222 26.73196806931621 22.12382207731813 25.856498343993444 16 25.952121871599566 25.757999444785547 23.420526318988944 24.86935236462595 17 24.196844418462575 25.955686500583074 24.942528619177253 24.9049404617771 18 24.939919676761782 24.945998630209157 25.80100343258238 24.313078260446684 19 25.572712821411674 24.905852303870365 25.376666771359645 24.144768103358313 20 25.831908150693817 24.287239819738037 24.975785403968356 24.905066625599794 21 26.51454438796652 24.248312838837986 24.714162832708382 24.522979940487104 22 26.01070097354341 24.19633783952187 25.05812993344566 24.734831253489062 23 24.572345624977203 24.289269026111132 25.628867734130896 25.509517614780776 24 24.79617589814823 24.79060347334304 25.575707469987425 24.8375131585213 25 24.990856250120313 24.244361523100505 25.494902296119708 25.26987993065947 26 24.592127139413847 25.1968823042499 25.559796192747598 24.65119436358865 27 25.053596106227683 24.689669426511532 25.168893589946222 25.08784087731456 28 24.89336394455128 24.42446925132877 25.64939078137633 25.03277602274362 29 24.680879949666217 24.83832500347007 25.612277877348884 24.868517169514828 30 24.681283921998524 24.802964923247757 25.726565262455082 24.789185892298637 31 25.088043509096142 24.665961508066772 25.096351412140887 25.1496435706962 32 25.0130444077231 24.673636517452152 24.975354934534806 25.337964140289948 33 24.485619222461327 24.514696883117935 25.46524257050573 25.534441323915008 34 25.25093591217876 24.59764641516507 25.38001327247582 24.771404400180344 35 25.428389349257507 24.331238456309 25.660099026251988 24.58027316818151 36 24.620774620774622 24.828776144565616 25.40029908450961 25.150150150150154 37 25.381965552178322 24.76231003039514 25.152887537993923 24.702836879432624 38 24.68559178045274 24.589341781719188 25.49692861188252 25.228137825945556 39 25.326365466506317 24.583209642890072 25.027178125383102 25.06324676522051 40 25.49259786101891 24.614999614999615 25.275883170620013 24.616519353361458 41 24.52533120433149 25.19949260590636 25.64457692167408 24.630599268088073 42 25.59158393019436 25.01527403596263 25.15813566586185 24.235006367981164 43 25.286508492161353 24.37128217806233 25.28914282008857 25.053066509687742 44 24.624710731408793 24.9694013609302 25.2197630733192 25.186124834341804 45 24.89508548177598 25.051824023246343 25.145745566842354 24.907344928135327 46 24.713142699665347 24.852556614106135 25.189743756009435 25.24455693021908 47 24.816438517161618 24.810967386998367 25.445213217034667 24.92738087880535 48 25.445126331478157 25.28686369453082 24.5755937128597 24.692416261131324 49 24.796979027667593 25.387474961168916 24.693834748274256 25.121711262889235 50 25.062284638009487 25.355394776702354 24.86299405978312 24.71932652550504 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 256.0 1 163.0 2 70.0 3 152.0 4 234.0 5 263.0 6 292.0 7 219.0 8 146.0 9 216.5 10 287.0 11 492.0 12 697.0 13 1192.5 14 1688.0 15 2215.0 16 2742.0 17 2669.5 18 2597.0 19 2550.0 20 2503.0 21 2780.0 22 3057.0 23 3500.0 24 3943.0 25 4722.0 26 5501.0 27 6751.5 28 8002.0 29 9587.0 30 11172.0 31 12722.5 32 14273.0 33 16690.5 34 19108.0 35 21579.0 36 24050.0 37 28535.0 38 33020.0 39 36857.0 40 40694.0 41 44511.5 42 48329.0 43 51167.5 44 54006.0 45 59252.5 46 64499.0 47 68344.0 48 72189.0 49 75797.0 50 79405.0 51 77755.0 52 76105.0 53 75924.0 54 75743.0 55 75512.0 56 75281.0 57 72334.5 58 69388.0 59 63900.0 60 58412.0 61 51147.0 62 43882.0 63 37528.0 64 31174.0 65 26380.0 66 21586.0 67 18195.0 68 14804.0 69 12895.5 70 10987.0 71 8638.0 72 6289.0 73 5359.5 74 4430.0 75 3228.0 76 2026.0 77 1772.5 78 1519.0 79 1328.0 80 1137.0 81 905.5 82 674.0 83 560.5 84 447.0 85 334.5 86 222.0 87 153.5 88 85.0 89 54.0 90 23.0 91 16.5 92 10.0 93 10.5 94 11.0 95 8.0 96 5.0 97 7.5 98 10.0 99 6.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03090131538287743 2 0.003951315737482687 3 3.039473644217452E-4 4 0.0 5 0.0 6 1.0131578814058174E-4 7 0.0 8 0.0 9 0.0 10 1.0131578814058174E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.092105169840721E-4 17 0.0 18 1.0131578814058174E-4 19 0.0 20 5.065789407029086E-4 21 0.0 22 0.0 23 1.0131578814058174E-4 24 0.0010131578814058172 25 0.0 26 2.026315762811635E-4 27 1.0131578814058174E-4 28 0.0011144736695463992 29 2.026315762811635E-4 30 6.078947288434904E-4 31 1.0131578814058174E-4 32 0.0 33 1.0131578814058174E-4 34 8.10526305124654E-4 35 2.026315762811635E-4 36 1.0131578814058174E-4 37 0.0013171052458275626 38 0.0 39 6.078947288434904E-4 40 1.0131578814058174E-4 41 9.118420932652355E-4 42 0.004457894678185597 43 0.004457894678185597 44 0.0041539473137638516 45 0.0019249999746710528 46 0.0024315789153739617 47 0.0014184210339681443 48 0.00466052625446676 49 0.00466052625446676 50 0.0012157894576869809 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 987013.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.68156851406315 #Duplication Level Percentage of deduplicated Percentage of total 1 75.9931592177172 45.35390938452299 2 14.906972895755585 17.793430484306388 3 4.494992257880556 8.048045652266456 4 1.8002697284968057 4.2977168458030395 5 0.8495910817953805 2.5352464178554013 6 0.4820419636219787 1.7261412287135198 7 0.3044590810086158 1.2719416852061085 8 0.20298572540759338 0.9691605182632075 9 0.1478519722772705 0.7941633852064758 >10 0.7055187419328269 7.529611578666937 >50 0.059164079702450995 2.422393725308578 >100 0.04940338925185132 5.703609115006547 >500 0.0034189191922720874 1.4468934479850288 >1k 1.7094595961360438E-4 0.1077365308893097 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1056 0.10698947227645432 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.039473644217452E-4 2 0.0 0.0 0.0 0.0 3.039473644217452E-4 3 0.0 0.0 0.0 0.0 3.039473644217452E-4 4 0.0 0.0 0.0 0.0 3.039473644217452E-4 5 0.0 1.0131578814058173E-4 0.0 0.0 3.039473644217452E-4 6 0.0 1.0131578814058173E-4 0.0 0.0 4.052631525623269E-4 7 0.0 1.0131578814058173E-4 0.0 0.0 4.052631525623269E-4 8 0.0 1.0131578814058173E-4 0.0 0.0 4.052631525623269E-4 9 0.0 1.0131578814058173E-4 0.0 0.0 4.052631525623269E-4 10 0.0 1.0131578814058173E-4 0.0 1.0131578814058173E-4 4.052631525623269E-4 11 0.0 1.0131578814058173E-4 0.0 1.0131578814058173E-4 4.052631525623269E-4 12 0.0 1.0131578814058173E-4 0.0 1.0131578814058173E-4 9.118420932652357E-4 13 0.0 1.0131578814058173E-4 0.0 1.0131578814058173E-4 9.118420932652357E-4 14 0.0 1.0131578814058173E-4 0.0 1.0131578814058173E-4 9.118420932652357E-4 15 0.0 1.0131578814058173E-4 0.0 1.0131578814058173E-4 0.0011144736695463992 16 0.0 1.0131578814058173E-4 0.0 2.0263157628116346E-4 0.0011144736695463992 17 0.0 1.0131578814058173E-4 0.0 2.0263157628116346E-4 0.0011144736695463992 18 0.0 1.0131578814058173E-4 0.0 3.039473644217452E-4 0.0011144736695463992 19 0.0 1.0131578814058173E-4 0.0 6.078947288434904E-4 0.0011144736695463992 20 0.0 2.0263157628116346E-4 0.0 6.078947288434904E-4 0.0016210526102493077 21 0.0 2.0263157628116346E-4 0.0 6.078947288434904E-4 0.0016210526102493077 22 0.0 2.0263157628116346E-4 0.0 7.092105169840721E-4 0.0016210526102493077 23 0.0 2.0263157628116346E-4 0.0 0.0013171052458275626 0.0016210526102493077 24 0.0 2.0263157628116346E-4 0.0 0.001924999974671053 0.0016210526102493077 25 0.0 2.0263157628116346E-4 0.0 0.00233026312723338 0.0016210526102493077 26 0.0 2.0263157628116346E-4 0.0 0.003039473644217452 0.0017223683983898896 27 0.0 2.0263157628116346E-4 0.0 0.003444736796779779 0.0017223683983898896 28 0.0 2.0263157628116346E-4 0.0 0.005471052559591414 0.0017223683983898896 29 0.0 2.0263157628116346E-4 0.0 0.0105368419666205 0.0017223683983898896 30 0.0 2.0263157628116346E-4 0.0 0.01641315767877424 0.0017223683983898896 31 0.0 2.0263157628116346E-4 0.0 0.03130657853543976 0.0017223683983898896 32 0.0 2.0263157628116346E-4 0.0 0.04731447306165167 0.0017223683983898896 33 0.0 2.0263157628116346E-4 0.0 0.06180263076575486 0.0017223683983898896 34 0.0 2.0263157628116346E-4 0.0 0.07649342004613921 0.0020263157628116345 35 0.0 2.0263157628116346E-4 0.0 0.09391973560631926 0.0020263157628116345 36 0.0 2.0263157628116346E-4 0.0 0.11965394579402702 0.0020263157628116345 37 0.0 2.0263157628116346E-4 0.0 0.15460789270252773 0.0020263157628116345 38 0.0 2.0263157628116346E-4 0.0 0.19999736578950836 0.0020263157628116345 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGATCG 40 7.032206E-4 27.499334 31 GTATCAA 1350 0.0 24.776049 1 TAGGACG 45 0.0013982288 24.443853 4 TACCGTC 200 0.0 20.899494 7 GGTATCA 695 0.0 20.896875 1 CGCAATA 180 0.0 20.77833 36 GTATTAT 120 1.4268153E-8 20.171288 1 CTAGCGG 190 0.0 19.683735 29 ATACCGT 225 0.0 19.555082 6 ACCGTCG 215 0.0 19.441391 8 GTATATG 160 5.2750693E-11 19.254412 1 GTATTAC 60 0.0074013723 18.337534 1 CGGATCG 60 0.007412195 18.33289 26 ATACCGA 60 0.007412195 18.33289 6 ATACGAA 205 0.0 18.24531 40 TAGCGGC 205 0.0 18.243462 30 GTAGGAC 145 6.3046173E-9 18.206457 3 CGTCGTA 230 0.0 18.173475 10 TAGGACA 160 1.1004886E-9 17.874567 4 TCTAGCG 210 0.0 17.809093 28 >>END_MODULE