##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062318_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2070227 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26013813944075 32.0 32.0 32.0 32.0 32.0 2 31.395476921129905 32.0 32.0 32.0 32.0 32.0 3 31.535992912854486 32.0 32.0 32.0 32.0 32.0 4 31.618395470641627 32.0 32.0 32.0 32.0 32.0 5 31.592410397507134 32.0 32.0 32.0 32.0 32.0 6 35.21300900819089 36.0 36.0 36.0 36.0 36.0 7 35.21508172775256 36.0 36.0 36.0 36.0 36.0 8 35.16417426687991 36.0 36.0 36.0 36.0 36.0 9 35.25460879410809 36.0 36.0 36.0 36.0 36.0 10 35.13114503868417 36.0 36.0 36.0 36.0 36.0 11 35.25746113831961 36.0 36.0 36.0 36.0 36.0 12 35.17418283115813 36.0 36.0 36.0 36.0 36.0 13 35.20903214961451 36.0 36.0 36.0 36.0 36.0 14 35.1765246033406 36.0 36.0 36.0 36.0 36.0 15 35.15015648042461 36.0 36.0 36.0 36.0 36.0 16 35.166315577953526 36.0 36.0 36.0 36.0 36.0 17 35.14406101359899 36.0 36.0 36.0 36.0 36.0 18 35.14127243051124 36.0 36.0 36.0 36.0 36.0 19 35.13493254604447 36.0 36.0 36.0 36.0 36.0 20 35.13501514568209 36.0 36.0 36.0 36.0 36.0 21 35.13202465236904 36.0 36.0 36.0 36.0 36.0 22 35.10871223300633 36.0 36.0 36.0 36.0 36.0 23 35.079642473989566 36.0 36.0 36.0 36.0 36.0 24 35.063992499373256 36.0 36.0 36.0 36.0 36.0 25 35.04455743259073 36.0 36.0 36.0 36.0 36.0 26 35.005635130833475 36.0 36.0 36.0 36.0 36.0 27 34.989931538908536 36.0 36.0 36.0 36.0 36.0 28 34.97430571623305 36.0 36.0 36.0 36.0 36.0 29 34.95132949188664 36.0 36.0 36.0 36.0 36.0 30 34.93803964492783 36.0 36.0 36.0 36.0 36.0 31 34.93766142553449 36.0 36.0 36.0 32.0 36.0 32 34.90862499619607 36.0 36.0 36.0 32.0 36.0 33 34.892104585632396 36.0 36.0 36.0 32.0 36.0 34 34.8805787964315 36.0 36.0 36.0 32.0 36.0 35 34.86750776605657 36.0 36.0 36.0 32.0 36.0 36 34.84813839255309 36.0 36.0 36.0 32.0 36.0 37 34.83647203905659 36.0 36.0 36.0 32.0 36.0 38 34.81931546637156 36.0 36.0 36.0 32.0 36.0 39 34.81865611838702 36.0 36.0 36.0 32.0 36.0 40 34.80300324553781 36.0 36.0 36.0 32.0 36.0 41 34.76895045808986 36.0 36.0 36.0 32.0 36.0 42 34.7462389390149 36.0 36.0 36.0 32.0 36.0 43 34.743508320585136 36.0 36.0 36.0 32.0 36.0 44 34.69664630980081 36.0 36.0 36.0 32.0 36.0 45 34.683959778323825 36.0 36.0 36.0 32.0 36.0 46 34.66998594840083 36.0 36.0 36.0 32.0 36.0 47 34.64483218506956 36.0 36.0 36.0 32.0 36.0 48 34.61967069311723 36.0 36.0 36.0 32.0 36.0 49 34.612574369863786 36.0 36.0 36.0 32.0 36.0 50 34.18675053508625 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 6.0 20 11.0 21 47.0 22 113.0 23 396.0 24 956.0 25 2255.0 26 5050.0 27 9382.0 28 16426.0 29 26803.0 30 40207.0 31 60214.0 32 91470.0 33 155412.0 34 350954.0 35 1310524.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.374065331938525 17.42904978534344 11.860252176160921 26.33663270655711 2 16.303848489254577 19.34702872321977 36.834422069650465 27.514700717875197 3 18.987411476756808 22.555729611215046 28.03732358750451 30.41953532452364 4 12.67094156432272 15.497494233718555 34.97571520003864 36.855849001920085 5 14.825572268161896 36.42209284295877 32.99956961241449 15.75276527646485 6 35.92579156931403 34.62284014813863 15.916352972602468 13.53501530994487 7 31.477610909335063 29.776396501446463 19.47646320910702 19.269529380111454 8 28.592275146638507 33.19360630500906 18.37436184534353 19.8397567030089 9 27.035392737124965 14.282733246160928 18.181146318737028 40.50072769797708 10 16.218575275634294 26.684056080860774 30.905819415763986 26.191549227740946 11 37.937965256950086 21.106091264387917 21.44639211062362 19.509551368038384 12 24.574068447566376 23.416224404376912 28.19951628492914 23.81019086312757 13 29.496572115038592 19.13790130261078 24.955475897087613 26.410050685263016 14 23.573163715863043 19.124327911866672 24.654301194989728 32.64820717728056 15 25.337897728123533 26.87106293174613 21.74428214876919 26.04675719136114 16 26.167826128120087 25.92099174288262 23.02206438561424 24.889117743383053 17 24.388195110970923 25.975798789214906 24.596529752534384 25.039476347279795 18 25.163521031309187 25.2148198527405 25.32504952365035 24.29660959229996 19 25.817217145752615 24.996196069319936 24.9282325078361 24.258354277091353 20 25.856563139877338 24.44565097156294 24.600803489096094 25.09698239946363 21 26.64640157818442 24.19372368344148 24.39379836124251 24.76607637713159 22 25.95541455115792 24.19468976107451 24.880749792172548 24.969145895595023 23 24.722035178767925 24.32579824618182 25.30670564469773 25.64546093035253 24 24.83077795526925 24.838168513420626 25.060126779470092 25.270926751840033 25 25.059293157931855 24.36782142205039 25.131797459402904 25.44108796061485 26 24.953833386709327 25.209458516224615 25.205642494827842 24.631065602238216 27 25.453672467027594 24.839147219420582 24.70727692182845 24.99990339172338 28 25.079388848366573 24.4820523720045 25.326515923659183 25.11204285596974 29 24.877742462153783 24.945706253441664 25.230168774333162 24.946382510071395 30 24.872681321940547 24.988805424019624 25.39379064524715 24.74472260879268 31 25.34490312377579 24.74786483942037 24.580636154918874 25.326595881884963 32 25.308387035692565 24.703664899210562 24.486150418774546 25.501797646322323 33 24.840765869554087 24.6996215864772 24.90138738743961 25.558225156529108 34 25.387799384312775 24.60821550695172 25.248876078575716 24.755109030159787 35 25.892163203831863 24.399568934910814 25.180741573001143 24.527526288256183 36 24.731888657351725 25.06050075788973 24.87293633243198 25.33467425232656 37 25.774265055026373 24.684944224899272 24.74382773746745 24.796962982606903 38 25.015179494809026 24.457801004430916 25.18052368170254 25.346495819057523 39 25.642059847010838 24.59569358114048 24.528985437240244 25.233261134608437 40 25.753335990049393 24.647369247304038 24.961296477436026 24.637998285210543 41 24.683932267577365 25.081670655804615 25.24363529215706 24.99076178446096 42 25.88603045602889 24.921357671877928 24.88855783109483 24.304054040998352 43 25.458458223940834 24.16115779329467 25.023078093563495 25.357305889200997 44 24.89221769489577 24.8915414137657 24.92699786729915 25.289243024039376 45 25.223085004890887 25.04860700182352 24.741676428321277 24.986631564964316 46 25.018778623815496 24.9098505294002 24.859033520386944 25.21233732639736 47 25.142631077851863 24.79725398644866 25.1114263784048 24.94868855729468 48 25.70160476526546 25.308299362315818 24.274797876672526 24.715297995746198 49 25.104013749668503 25.259170913924965 24.50116150498585 25.13565383142068 50 25.292749209980474 25.26115808988688 24.435731392395525 25.010361307737117 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 83.0 1 64.5 2 46.0 3 118.5 4 191.0 5 215.0 6 239.0 7 203.5 8 168.0 9 249.0 10 330.0 11 501.0 12 672.0 13 1264.0 14 1856.0 15 2475.0 16 3094.0 17 3168.0 18 3242.0 19 3296.5 20 3351.0 21 4177.0 22 5003.0 23 6178.5 24 7354.0 25 9421.5 26 11489.0 27 14457.5 28 17426.0 29 20222.0 30 23018.0 31 26095.5 32 29173.0 33 33881.5 34 38590.0 35 44432.5 36 50275.0 37 59568.0 38 68861.0 39 76752.5 40 84644.0 41 93083.0 42 101522.0 43 107318.5 44 113115.0 45 123456.5 46 133798.0 47 143183.5 48 152569.0 49 159472.5 50 166376.0 51 164413.0 52 162450.0 53 161158.5 54 159867.0 55 160817.5 56 161768.0 57 155545.5 58 149323.0 59 136568.0 60 123813.0 61 107879.0 62 91945.0 63 79116.5 64 66288.0 65 55742.0 66 45196.0 67 38385.5 68 31575.0 69 27909.5 70 24244.0 71 18929.5 72 13615.0 73 11742.0 74 9869.0 75 7285.0 76 4701.0 77 4114.5 78 3528.0 79 2957.0 80 2386.0 81 1897.0 82 1408.0 83 1146.5 84 885.0 85 718.0 86 551.0 87 360.0 88 169.0 89 109.0 90 49.0 91 40.5 92 32.0 93 28.0 94 24.0 95 23.0 96 22.0 97 23.0 98 24.0 99 17.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03101109202034366 2 0.004347349348646308 3 3.864310532130052E-4 4 9.66077633032513E-5 5 0.0 6 1.932155266065026E-4 7 0.0 8 0.0 9 0.0 10 9.66077633032513E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.279504614711334E-4 17 0.0 18 1.932155266065026E-4 19 0.0 20 2.8982328990975384E-4 21 0.0 22 0.0 23 4.830388165162565E-5 24 8.694698697292616E-4 25 2.415194082581282E-4 26 3.864310532130052E-4 27 5.313426981678821E-4 28 0.0017872436211101488 29 3.381271715613795E-4 30 0.001352508686245518 31 3.864310532130052E-4 32 9.660776330325128E-4 33 2.415194082581282E-4 34 9.660776330325128E-4 35 2.8982328990975384E-4 36 2.415194082581282E-4 37 0.0018355475027617746 38 0.0 39 7.245582247743847E-4 40 9.66077633032513E-5 41 0.0010626853963357642 42 0.004588868756904436 43 0.003960918295433303 44 0.003960918295433303 45 0.0025118018458845336 46 0.0026084096091877848 47 0.0012559009229422668 48 0.003864310532130051 49 0.0032846639523105435 50 0.001207597041290641 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2070227.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.28289133201947 #Duplication Level Percentage of deduplicated Percentage of total 1 74.14438377293762 38.76482759680045 2 14.899213403193242 15.579479105834404 3 4.845548508076702 7.600178582754098 4 2.136412571089588 4.46791305178549 5 1.0607931737780265 2.7730667115192302 6 0.650105536032627 2.039363825684286 7 0.4063200411092069 1.487051058873404 8 0.3036451284611469 1.2700356203864989 9 0.23865681550125933 1.1229901515448346 >10 1.1580272665263938 10.74970169103097 >50 0.0824772592588356 2.975160882428092 >100 0.06494250633040244 6.83479147250316 >500 0.007059072015421696 2.5232643943066444 >1k 0.002414945689486366 1.8121758545485172 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2447 0.11819959840152795 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.830388165162564E-5 2 0.0 0.0 0.0 0.0 4.830388165162564E-5 3 0.0 0.0 0.0 0.0 4.830388165162564E-5 4 0.0 0.0 0.0 0.0 4.830388165162564E-5 5 0.0 0.0 0.0 0.0 4.830388165162564E-5 6 0.0 0.0 0.0 0.0 1.9321552660650257E-4 7 0.0 0.0 0.0 0.0 1.9321552660650257E-4 8 0.0 0.0 0.0 0.0 1.9321552660650257E-4 9 0.0 0.0 0.0 0.0 1.9321552660650257E-4 10 0.0 0.0 0.0 4.830388165162564E-5 1.9321552660650257E-4 11 0.0 0.0 0.0 4.830388165162564E-5 1.9321552660650257E-4 12 0.0 0.0 0.0 4.830388165162564E-5 5.313426981678821E-4 13 0.0 0.0 0.0 4.830388165162564E-5 5.313426981678821E-4 14 0.0 0.0 0.0 4.830388165162564E-5 5.796465798195077E-4 15 0.0 0.0 0.0 9.660776330325129E-5 7.245582247743847E-4 16 0.0 0.0 0.0 9.660776330325129E-5 8.694698697292616E-4 17 0.0 0.0 0.0 9.660776330325129E-5 8.694698697292616E-4 18 0.0 0.0 0.0 9.660776330325129E-5 8.694698697292616E-4 19 0.0 0.0 0.0 9.660776330325129E-5 8.694698697292616E-4 20 0.0 0.0 0.0 9.660776330325129E-5 9.660776330325129E-4 21 0.0 0.0 0.0 1.4491164495487692E-4 9.660776330325129E-4 22 0.0 0.0 0.0 2.4151940825812822E-4 9.660776330325129E-4 23 0.0 0.0 0.0 3.381271715613795E-4 0.0010143815146841386 24 0.0 0.0 0.0 4.347349348646308E-4 0.0010143815146841386 25 0.0 0.0 0.0 4.347349348646308E-4 0.0010143815146841386 26 0.0 0.0 0.0 4.8303881651625644E-4 0.001207597041290641 27 0.0 0.0 0.0 4.8303881651625644E-4 0.001207597041290641 28 0.0 0.0 0.0 0.0010626853963357642 0.001207597041290641 29 0.0 0.0 0.0 0.0019804591477166514 0.001207597041290641 30 0.0 0.0 0.0 0.003960918295433303 0.001207597041290641 31 0.0 0.0 0.0 0.006231200733059708 0.0012559009229422668 32 0.0 0.0 0.0 0.009902295738583257 0.001497420331200395 33 0.0 0.0 0.0 0.013138655809242174 0.001497420331200395 34 0.0 0.0 0.0 0.01651992752485597 0.0015457242128520206 35 0.0 0.0 0.0 0.020577453583592524 0.0015457242128520206 36 0.0 0.0 0.0 0.027243389251516863 0.0015457242128520206 37 0.0 0.0 0.0 0.034827098670822086 0.0015457242128520206 38 0.0 0.0 0.0 0.04931826316630978 0.0017872436211101488 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2285 0.0 27.451488 1 TAGGACG 95 2.6893758E-8 23.15655 4 GGTATCA 1110 0.0 22.207634 1 TTAACGG 95 6.870232E-7 20.842403 35 CGGATCG 240 0.0 20.166468 26 ATCGATT 245 0.0 19.754908 29 TGTACGC 80 8.991528E-5 19.250275 2 CGCTTCG 400 0.0 19.249344 32 TCAACGC 3270 0.0 19.105923 4 ATCAACG 3260 0.0 19.097048 3 TCGATTT 265 0.0 19.094152 30 CAACGCA 3340 0.0 18.771362 5 TATCAAC 3460 0.0 18.375984 2 CAAGACG 875 0.0 18.353218 4 CGCGGGA 420 0.0 18.33448 44 TAGCGTT 60 0.007416331 18.332266 9 GGATCGA 265 0.0 18.263971 27 AACGCAG 3445 0.0 18.263088 6 TAACGGC 110 2.7979986E-6 18.000256 36 CGGACCA 795 0.0 17.986376 9 >>END_MODULE