##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062317_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1809074 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.18518645450656 32.0 32.0 32.0 32.0 32.0 2 31.227383733335397 32.0 32.0 32.0 32.0 32.0 3 31.446384725002957 32.0 32.0 32.0 32.0 32.0 4 31.560450263504976 32.0 32.0 32.0 32.0 32.0 5 31.505396683607195 32.0 32.0 32.0 32.0 32.0 6 35.13965818977002 36.0 36.0 36.0 36.0 36.0 7 35.15587698457885 36.0 36.0 36.0 36.0 36.0 8 35.086207639930706 36.0 36.0 36.0 36.0 36.0 9 35.211905096198386 36.0 36.0 36.0 36.0 36.0 10 35.047692908084464 36.0 36.0 36.0 36.0 36.0 11 35.21127051740282 36.0 36.0 36.0 36.0 36.0 12 35.12145219045766 36.0 36.0 36.0 36.0 36.0 13 35.163914245630636 36.0 36.0 36.0 36.0 36.0 14 35.11933619078048 36.0 36.0 36.0 36.0 36.0 15 35.08219287878771 36.0 36.0 36.0 36.0 36.0 16 35.098574740447326 36.0 36.0 36.0 36.0 36.0 17 35.0864508582844 36.0 36.0 36.0 36.0 36.0 18 35.07132046560837 36.0 36.0 36.0 36.0 36.0 19 35.067027661665584 36.0 36.0 36.0 36.0 36.0 20 35.070499603664636 36.0 36.0 36.0 36.0 36.0 21 35.057934611851145 36.0 36.0 36.0 36.0 36.0 22 35.04387051054849 36.0 36.0 36.0 36.0 36.0 23 35.00813620670022 36.0 36.0 36.0 36.0 36.0 24 34.989387941012914 36.0 36.0 36.0 36.0 36.0 25 34.97737129603322 36.0 36.0 36.0 36.0 36.0 26 34.922564803872035 36.0 36.0 36.0 32.0 36.0 27 34.90934256973457 36.0 36.0 36.0 32.0 36.0 28 34.8906506864838 36.0 36.0 36.0 32.0 36.0 29 34.86669810079632 36.0 36.0 36.0 32.0 36.0 30 34.85288163999925 36.0 36.0 36.0 32.0 36.0 31 34.84526282506962 36.0 36.0 36.0 32.0 36.0 32 34.8203158079769 36.0 36.0 36.0 32.0 36.0 33 34.794506471266516 36.0 36.0 36.0 32.0 36.0 34 34.77893718001585 36.0 36.0 36.0 32.0 36.0 35 34.769682168888615 36.0 36.0 36.0 32.0 36.0 36 34.741846933845714 36.0 36.0 36.0 32.0 36.0 37 34.7282676109435 36.0 36.0 36.0 32.0 36.0 38 34.71072493441396 36.0 36.0 36.0 32.0 36.0 39 34.68822226177591 36.0 36.0 36.0 32.0 36.0 40 34.67852116607723 36.0 36.0 36.0 32.0 36.0 41 34.64352701990079 36.0 36.0 36.0 32.0 36.0 42 34.62068107772264 36.0 36.0 36.0 32.0 36.0 43 34.60853287372435 36.0 36.0 36.0 32.0 36.0 44 34.57179142478417 36.0 36.0 36.0 32.0 36.0 45 34.54823793830435 36.0 36.0 36.0 32.0 36.0 46 34.532482363905515 36.0 36.0 36.0 32.0 36.0 47 34.50294460038672 36.0 36.0 36.0 32.0 36.0 48 34.47845638155211 36.0 36.0 36.0 32.0 36.0 49 34.45912218073998 36.0 36.0 36.0 32.0 36.0 50 33.979427596659946 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 17.0 21 51.0 22 109.0 23 294.0 24 819.0 25 1994.0 26 4319.0 27 8376.0 28 14708.0 29 24145.0 30 37188.0 31 56957.0 32 89899.0 33 157418.0 34 355540.0 35 1057235.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.32824382740282 17.220127858769253 11.704186429188338 26.747441884639585 2 16.178031425374687 19.60841002463261 36.87766171508427 27.335896834908436 3 19.184376953696123 22.9274030704157 28.011006754295437 29.87721322159274 4 12.848507026246578 15.499863466060537 34.911728320676765 36.73990118701612 5 14.909395635557196 36.334610966715566 33.12130957605935 15.63468382166788 6 35.79201700762435 34.28102047957211 16.07073464778331 13.856227865020223 7 30.99298315049578 29.67098084434357 19.891005011403625 19.445030993757026 8 28.159655160595975 33.46850377596494 18.662033725541356 19.70980733789773 9 27.125258557693048 14.304500534527609 17.85781012827557 40.71243077950377 10 15.672880158578367 27.170696168315946 31.859337981751988 25.2970856913537 11 37.76484544026392 20.970120625248054 21.55439744311178 19.710636491376253 12 24.506626041831346 23.110773799192295 28.816289438685207 23.566310720291153 13 29.843610598571424 19.60748979864837 24.494741508639226 26.054158094140977 14 23.185839827447634 18.838256478176127 25.26972362656254 32.7061800678137 15 25.275693531607885 26.85318566294137 21.94796896091592 25.923151844534832 16 25.863544301558385 25.655258875347144 23.3789888206888 25.102208002405675 17 24.309674452233573 25.593425144576727 25.03413348486574 25.06276691832396 18 24.679476194950997 25.29299584869574 25.447882060948444 24.579645895404823 19 25.679104337357124 24.767975218260833 25.112460850136586 24.440459594245453 20 25.694638681753606 24.704793070472675 24.959399028229974 24.641169219543745 21 26.038473848208447 24.318311090818337 24.76622004750499 24.87699501346822 22 25.474248151264128 24.491480171623714 24.899202575461256 25.1350691016509 23 24.869961096118786 24.53957107337787 25.066967962615127 25.523499867888212 24 25.041043369436757 24.640227919220013 25.215277309456503 25.103451401886723 25 25.17800572780173 24.273342505628577 25.2075236405868 25.34112812598289 26 24.886212001109964 24.741772826419822 25.248332564981048 25.12368260748917 27 25.113981342879317 24.872807434546406 24.744785712864303 25.268425509709974 28 25.016030495530256 24.70995858604396 24.96296402756803 25.311046890857753 29 24.940646331736012 24.97458640373982 24.964139052585555 25.120628211938612 30 25.121333999610844 24.906138892328375 24.9913767180231 24.981150390037676 31 25.26089386308648 24.549975705735932 24.933708996174275 25.255421435003306 32 25.081741301150156 24.695684667349525 24.89451710030784 25.32805693119248 33 24.91420996889006 24.638377330205387 25.156655250106684 25.29075745079787 34 25.148295493176832 24.6496379052733 25.17013007329233 25.031936528257543 35 25.27295762689379 24.813163876285742 25.08578984142146 24.82808865539901 36 25.135014123278808 24.77228631285688 25.109531416694765 24.98316814716954 37 25.366491915066742 24.623447522558877 24.69868062910576 25.311379933268626 38 25.12274235327024 24.87344354072857 24.949228168665293 25.0545859373359 39 25.1673105550338 24.694523844137926 24.910713347974447 25.227452252853826 40 25.37979396077439 24.551469177860703 25.222918035922266 24.845818825442645 41 25.112503240635046 24.699249720434768 25.123392879944767 25.064854158985415 42 25.315576124396284 24.679863327276557 24.930886963078354 25.073673585248812 43 25.223671940082177 24.703387652148052 24.836056828841837 25.236883578927934 44 24.957725519634764 24.988073593803463 25.03290471976124 25.021296166800532 45 25.21530804251546 24.981592406121273 24.773249399127494 25.029850152235777 46 25.110970336785986 24.823138434596874 24.889582441977577 25.176308786639556 47 25.03646919589776 24.945980262688767 25.042881362209457 24.974669179204017 48 25.259422802230603 25.051685557231114 24.70254547223463 24.98634616830365 49 25.116928273121008 24.884315497660328 24.727932051420247 25.270824177798417 50 25.025718017758557 25.146610666523685 24.760107968688416 25.067563347029342 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 157.0 1 106.5 2 56.0 3 155.5 4 255.0 5 281.5 6 308.0 7 268.5 8 229.0 9 301.5 10 374.0 11 600.5 12 827.0 13 1436.5 14 2046.0 15 2764.0 16 3482.0 17 3475.0 18 3468.0 19 3484.5 20 3501.0 21 4209.0 22 4917.0 23 6087.5 24 7258.0 25 9018.0 26 10778.0 27 13323.5 28 15869.0 29 18643.0 30 21417.0 31 24631.0 32 27845.0 33 32243.5 34 36642.0 35 42207.0 36 47772.0 37 53681.0 38 59590.0 39 65772.5 40 71955.0 41 78174.0 42 84393.0 43 90129.0 44 95865.0 45 104794.5 46 113724.0 47 120692.5 48 127661.0 49 131851.0 50 136041.0 51 139418.5 52 142796.0 53 143552.5 54 144309.0 55 141998.0 56 139687.0 57 134802.5 58 129918.0 59 119166.0 60 108414.0 61 97155.0 62 85896.0 63 74081.5 64 62267.0 65 52275.5 66 42284.0 67 35521.5 68 28759.0 69 24333.0 70 19907.0 71 15646.0 72 11385.0 73 9437.5 74 7490.0 75 5751.0 76 4012.0 77 3218.5 78 2425.0 79 1922.0 80 1419.0 81 1122.5 82 826.0 83 641.5 84 457.0 85 331.0 86 205.0 87 147.0 88 89.0 89 64.5 90 40.0 91 26.5 92 13.0 93 12.0 94 11.0 95 15.5 96 20.0 97 14.0 98 8.0 99 7.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.028522879661086277 2 0.0049749208711197 3 1.6583069570399E-4 4 0.0 5 0.0 6 1.6583069570399E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.9498417422394E-4 17 0.0 18 2.2110759427198666E-4 19 0.0 20 2.2110759427198666E-4 21 5.5276898567996666E-5 22 0.0 23 0.0 24 6.6332278281596E-4 25 1.6583069570399E-4 26 4.4221518854397333E-4 27 3.3166139140798E-4 28 0.0012160917684959267 29 1.6583069570399E-4 30 9.9498417422394E-4 31 2.7638449283998336E-4 32 7.185996813839567E-4 33 3.3166139140798E-4 34 9.397072756559434E-4 35 1.1055379713599333E-4 36 2.2110759427198666E-4 37 0.0016583069570398998 38 0.0 39 7.185996813839567E-4 40 5.5276898567996666E-5 41 8.291534785199499E-4 42 0.00447742878400773 43 0.0034824446097837898 44 0.0034824446097837898 45 0.002100522145583873 46 0.0017688607541758933 47 7.185996813839567E-4 48 0.0032060601169438064 49 0.003261337015511803 50 0.0017135838556078967 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1809074.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.27405541442237 #Duplication Level Percentage of deduplicated Percentage of total 1 73.3801084656295 40.5601618164553 2 15.108528429060279 16.70219275236507 3 4.984020027119519 8.264609974967856 4 2.1651212849596293 4.787001355352157 5 1.1561860645911715 3.195354630179767 6 0.6591702929968821 2.186100918159042 7 0.46856285736766606 1.8129558540296322 8 0.3310776394611791 1.4640003032042692 9 0.25045376154290905 1.2459235584845954 >10 1.380376797601946 13.779831739983061 >50 0.08693055147593372 3.262090570559553 >100 0.029061700459080252 2.589964991535078 >500 3.0159580075112815E-4 0.0889089226851997 >1k 1.0053193358370933E-4 0.060902612039361766 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.5276898567996666E-5 2 1.1055379713599333E-4 0.0 0.0 0.0 5.5276898567996666E-5 3 1.1055379713599333E-4 0.0 0.0 0.0 5.5276898567996666E-5 4 1.1055379713599333E-4 0.0 0.0 0.0 5.5276898567996666E-5 5 1.1055379713599333E-4 0.0 0.0 0.0 5.5276898567996666E-5 6 1.1055379713599333E-4 0.0 0.0 0.0 5.5276898567996666E-5 7 1.1055379713599333E-4 0.0 0.0 0.0 5.5276898567996666E-5 8 1.1055379713599333E-4 0.0 0.0 0.0 1.1055379713599333E-4 9 1.1055379713599333E-4 0.0 0.0 0.0 1.1055379713599333E-4 10 1.1055379713599333E-4 0.0 0.0 0.0 1.1055379713599333E-4 11 1.1055379713599333E-4 0.0 0.0 0.0 1.1055379713599333E-4 12 1.6583069570399E-4 0.0 0.0 0.0 6.080458842479634E-4 13 1.6583069570399E-4 0.0 0.0 0.0 8.844303770879467E-4 14 1.6583069570399E-4 0.0 0.0 0.0 8.844303770879467E-4 15 1.6583069570399E-4 0.0 0.0 1.6583069570399E-4 0.00116081486992793 16 1.6583069570399E-4 0.0 0.0 1.6583069570399E-4 0.0012160917684959267 17 1.6583069570399E-4 0.0 0.0 1.6583069570399E-4 0.00132664556563192 18 2.2110759427198666E-4 0.0 0.0 3.3166139140798E-4 0.00149247626133591 19 3.8693828997597664E-4 0.0 0.0 3.3166139140798E-4 0.0015477531599039065 20 3.8693828997597664E-4 0.0 0.0 4.9749208711197E-4 0.0016583069570399 21 3.8693828997597664E-4 0.0 0.0 6.080458842479634E-4 0.00182413765274389 22 3.8693828997597664E-4 0.0 0.0 9.9498417422394E-4 0.00198996834844788 23 3.8693828997597664E-4 0.0 0.0 0.00149247626133591 0.00198996834844788 24 5.527689856799666E-4 0.0 0.0 0.0023769066384238566 0.00198996834844788 25 5.527689856799666E-4 0.0 0.0 0.0029296756241038234 0.0020452452470158767 26 5.527689856799666E-4 0.0 0.0 0.003261337015511803 0.00232162973985586 27 5.527689856799666E-4 0.0 0.0 0.004035213595463757 0.0023769066384238566 28 5.527689856799666E-4 0.0 0.0 0.00480909017541571 0.0023769066384238566 29 5.527689856799666E-4 0.0 0.0 0.007517658205247546 0.0023769066384238566 30 5.527689856799666E-4 0.0 0.0 0.011055379713599333 0.0023769066384238566 31 5.527689856799666E-4 0.0 0.0 0.018351930324574894 0.00265329113126384 32 5.527689856799666E-4 0.0 0.0 0.026035419225526428 0.0029296756241038234 33 5.527689856799666E-4 0.0 0.0 0.03333196983650199 0.0030402294212398167 34 5.527689856799666E-4 0.0 0.0 0.041678781520269485 0.0033718908126477965 35 6.080458842479634E-4 0.0 0.0 0.05118640807396491 0.0033718908126477965 36 6.080458842479634E-4 0.0 0.0 0.06356843335319616 0.0033718908126477965 37 6.080458842479634E-4 0.0 0.0 0.082915347851995 0.0033718908126477965 38 7.185996813839566E-4 0.0 0.0 0.1077346753090255 0.0035929984069197835 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAGG 55 1.5942485E-4 23.999548 15 GTATCAA 2005 0.0 23.486694 1 CTAGCGG 190 0.0 20.842289 29 AGCGTAT 110 1.2667624E-7 19.999624 8 TCTAGCG 200 0.0 19.800173 28 ATACGAA 200 0.0 19.800173 40 AATAGCG 100 1.1242719E-6 19.799627 5 TACGAAT 190 0.0 19.684383 41 TAGCGTA 80 8.9930145E-5 19.249638 7 ATAGCGT 105 1.7940147E-6 18.856787 6 GGTATCA 1050 0.0 17.81362 1 CAATACG 215 0.0 17.395502 38 CGCAATA 230 0.0 17.217066 36 GTATAGG 180 2.8558134E-10 17.115046 1 GTATTAC 155 1.436274E-8 17.036175 1 TAGCGGC 225 1.8189894E-12 16.62237 30 TATCAAC 2830 0.0 16.480255 2 TCAACGC 2815 0.0 16.333618 4 ATCAACG 2835 0.0 16.218388 3 CGTATAT 95 3.347943E-4 16.21022 10 >>END_MODULE