##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062315_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1501847 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.250767221960693 32.0 32.0 32.0 32.0 32.0 2 31.462712912833332 32.0 32.0 32.0 32.0 32.0 3 31.570927664402564 32.0 32.0 32.0 32.0 32.0 4 31.65225951778044 32.0 32.0 32.0 32.0 32.0 5 31.627272285392586 32.0 32.0 32.0 32.0 32.0 6 35.26236627299585 36.0 36.0 36.0 36.0 36.0 7 35.2628889627239 36.0 36.0 36.0 36.0 36.0 8 35.21797027260433 36.0 36.0 36.0 36.0 36.0 9 35.2862242292324 36.0 36.0 36.0 36.0 36.0 10 35.176719732436126 36.0 36.0 36.0 36.0 36.0 11 35.28936702606857 36.0 36.0 36.0 36.0 36.0 12 35.21814938539012 36.0 36.0 36.0 36.0 36.0 13 35.258151462832096 36.0 36.0 36.0 36.0 36.0 14 35.20876827000354 36.0 36.0 36.0 36.0 36.0 15 35.194534463230944 36.0 36.0 36.0 36.0 36.0 16 35.20634725108483 36.0 36.0 36.0 36.0 36.0 17 35.18456340759079 36.0 36.0 36.0 36.0 36.0 18 35.1838589416898 36.0 36.0 36.0 36.0 36.0 19 35.173434444387475 36.0 36.0 36.0 36.0 36.0 20 35.17215668440261 36.0 36.0 36.0 36.0 36.0 21 35.16169623137377 36.0 36.0 36.0 36.0 36.0 22 35.15146216625262 36.0 36.0 36.0 36.0 36.0 23 35.12233869362192 36.0 36.0 36.0 36.0 36.0 24 35.10311969195264 36.0 36.0 36.0 36.0 36.0 25 35.08590422326642 36.0 36.0 36.0 36.0 36.0 26 35.04571104779648 36.0 36.0 36.0 36.0 36.0 27 35.0349795951252 36.0 36.0 36.0 36.0 36.0 28 35.017662251880516 36.0 36.0 36.0 36.0 36.0 29 34.997661546082924 36.0 36.0 36.0 36.0 36.0 30 34.98056859320557 36.0 36.0 36.0 36.0 36.0 31 34.9843958805391 36.0 36.0 36.0 36.0 36.0 32 34.95565726735147 36.0 36.0 36.0 36.0 36.0 33 34.93805427583502 36.0 36.0 36.0 36.0 36.0 34 34.920238213346636 36.0 36.0 36.0 36.0 36.0 35 34.908516646502605 36.0 36.0 36.0 36.0 36.0 36 34.88911853204754 36.0 36.0 36.0 32.0 36.0 37 34.882490027279744 36.0 36.0 36.0 32.0 36.0 38 34.86514205508284 36.0 36.0 36.0 32.0 36.0 39 34.8536155813475 36.0 36.0 36.0 32.0 36.0 40 34.8347128569022 36.0 36.0 36.0 32.0 36.0 41 34.80772075983772 36.0 36.0 36.0 32.0 36.0 42 34.778681849749006 36.0 36.0 36.0 32.0 36.0 43 34.76837787071519 36.0 36.0 36.0 32.0 36.0 44 34.72553728841886 36.0 36.0 36.0 32.0 36.0 45 34.69995612069672 36.0 36.0 36.0 32.0 36.0 46 34.69000304291982 36.0 36.0 36.0 32.0 36.0 47 34.65731862167052 36.0 36.0 36.0 32.0 36.0 48 34.63487359231666 36.0 36.0 36.0 32.0 36.0 49 34.6164256412271 36.0 36.0 36.0 32.0 36.0 50 34.212877210528106 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 8.0 20 15.0 21 64.0 22 175.0 23 421.0 24 1038.0 25 2168.0 26 4193.0 27 7800.0 28 12721.0 29 19790.0 30 27870.0 31 40474.0 32 60559.0 33 101504.0 34 231058.0 35 991989.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.58151276176267 17.447447647466298 11.731496776256195 26.239542814514838 2 16.542768752155784 19.62199372209134 36.72143744664643 27.113800079106444 3 19.237947609564007 22.6666107352386 28.01192404778408 30.083517607413313 4 12.907772895641168 15.535204318415923 34.68489133713354 36.87213144880936 5 14.90264987045951 36.28831698568496 32.77997026328248 16.029062880573054 6 35.49207807729825 34.31858813659199 16.137817151570236 14.051516634539515 7 31.30598523018656 29.8537733870361 19.453512907772897 19.386728475004446 8 28.640866879249348 32.79009113444978 18.600296834497787 19.96874515180308 9 27.094237961656546 14.435891272546405 18.36199026931505 40.107880496482004 10 16.80207797880472 26.334026703172896 30.45003342557549 26.41386189244688 11 37.58718431371504 21.164273058440706 21.498328391640424 19.75021423620382 12 24.800728702724044 23.418697110957375 27.923550135266773 23.857024051051805 13 29.541757582496754 19.186774684771486 24.898874519175386 26.37259321355637 14 23.837914248255647 19.22539379843619 24.65843724427322 32.27825470903494 15 25.458651913277453 26.616492891752625 21.954832949028763 25.970022245941166 16 26.180971944321445 25.712877912686814 23.0733735729957 25.03277656999604 17 24.426522808248777 25.83605387233187 24.568880851378335 25.168542468041018 18 25.06275626863545 24.87252320816704 25.545763136202076 24.518957386995435 19 25.733979559835323 24.748792653312886 25.18565473047521 24.33157305637658 20 26.067921925209177 23.959644223560133 24.84748728561327 25.124946565617424 21 26.69326502633091 23.96855338792833 24.593650351866735 24.744531233874024 22 26.238824593983274 23.855159680047304 24.99402402508378 24.911991700885643 23 24.765604972550427 24.012664422760004 25.38391112265247 25.837819482037094 24 24.854710392934475 24.512460814420827 25.34045176944364 25.292377023201055 25 25.14300819596268 23.98649121043096 25.264126533039207 25.606374060567163 26 24.86161947002238 25.068166518736724 25.362006662507312 24.708207348733584 27 25.367598833698107 24.480554199812097 25.048257438703565 25.10358952778623 28 25.082483198730078 24.263410885851243 25.439449841226086 25.214656074192597 29 24.84951792467906 24.663878975123847 25.502250572630906 24.984352527566188 30 24.926822512298347 24.70722346367227 25.470559877695713 24.89539414633367 31 25.26980237575241 24.56147126191871 24.75097214084057 25.41775422148831 32 25.256252671726244 24.497981806293357 24.737155405576367 25.508610116404036 33 24.80347466644294 24.256812634085342 25.21350448316134 25.72620821631037 34 25.518517063504483 24.49017232964295 25.21189135129053 24.779419255562043 35 25.830048473872054 24.148910669578648 25.338451499493953 24.682589357055345 36 24.708674220506698 24.82126936206962 25.087342801268576 25.382713616155105 37 25.69688963228518 24.553806857830786 25.01205207562045 24.737251434263584 38 24.98962943628745 24.348418980095843 25.20296674694559 25.45898483667111 39 25.637686138832738 24.42310611811143 24.67126903336982 25.26793870968601 40 25.658889127114232 24.500514699909314 25.02067455651245 24.819921616464004 41 24.683752488630535 24.981922055092788 25.423916155623473 24.910409300653203 42 25.807244222840158 24.73870936810816 25.023905029778078 24.430141379273607 43 25.559424331470858 24.017640552762177 25.067137578599073 25.355797537167884 44 24.952223297984123 24.753658663264478 24.98471811412872 25.30939992462268 45 25.2230146749882 24.8214317818468 24.87503387585755 25.08051966730745 46 25.06289094596772 24.680351523432453 24.92465737918213 25.33210015141769 47 25.198857923620977 24.5620331516434 25.178016627758478 25.061092296977144 48 25.61358813302339 25.09866618368457 24.42586502292944 24.861880660362594 49 25.0671535549101 25.118226213924522 24.518338880077135 25.29628135108824 50 25.312387220323046 25.201255541602137 24.497377185844925 24.98898005222989 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 249.0 1 161.0 2 73.0 3 199.5 4 326.0 5 330.0 6 334.0 7 282.5 8 231.0 9 332.0 10 433.0 11 706.5 12 980.0 13 1684.5 14 2389.0 15 3064.5 16 3740.0 17 3660.0 18 3580.0 19 3317.0 20 3054.0 21 3467.5 22 3881.0 23 4349.0 24 4817.0 25 5933.5 26 7050.0 27 8903.5 28 10757.0 29 12856.0 30 14955.0 31 17312.0 32 19669.0 33 22793.5 34 25918.0 35 30236.0 36 34554.0 37 41130.0 38 47706.0 39 53846.0 40 59986.0 41 66844.0 42 73702.0 43 78415.5 44 83129.0 45 90883.5 46 98638.0 47 104657.0 48 110676.0 49 115566.5 50 120457.0 51 118826.5 52 117196.0 53 116713.5 54 116231.0 55 116626.0 56 117021.0 57 112766.5 58 108512.0 59 99457.5 60 90403.0 61 79412.5 62 68422.0 63 59008.5 64 49595.0 65 41776.5 66 33958.0 67 28892.5 68 23827.0 69 20691.5 70 17556.0 71 13790.5 72 10025.0 73 8669.0 74 7313.0 75 5440.5 76 3568.0 77 3110.5 78 2653.0 79 2257.5 80 1862.0 81 1457.5 82 1053.0 83 887.0 84 721.0 85 565.0 86 409.0 87 277.5 88 146.0 89 94.5 90 43.0 91 29.0 92 15.0 93 11.5 94 8.0 95 9.0 96 10.0 97 9.5 98 9.0 99 8.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03242673854260787 2 0.004860681547454567 3 5.326774298580349E-4 4 0.0 5 0.0 6 1.3316935746450872E-4 7 0.0 8 0.0 9 0.0 10 1.9975403619676307E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.990161447870523E-4 17 0.0 18 3.3292339366127176E-4 19 0.0 20 3.3292339366127176E-4 21 0.0 22 0.0 23 1.3316935746450872E-4 24 0.0012651088959128327 25 6.658467873225435E-4 26 6.658467873225435E-4 27 3.9950807239352615E-4 28 0.0017312016470386131 29 4.660927511257805E-4 30 0.0012651088959128327 31 4.660927511257805E-4 32 5.992621085902891E-4 33 3.3292339366127176E-4 34 0.0010653548597160697 35 4.660927511257805E-4 36 3.9950807239352615E-4 37 0.002064125040699885 38 0.0 39 7.324314660547978E-4 40 6.658467873225436E-5 41 0.001131939538448324 42 0.004727512189990059 43 0.005326774298580348 44 0.004594342832525551 45 0.002663387149290174 46 0.0027299718280224283 47 0.0013982782533773414 48 0.004394588796328787 49 0.004328004117596532 50 0.0016646169683063585 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1501847.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.81662843677137 #Duplication Level Percentage of deduplicated Percentage of total 1 75.03884790152486 41.133766437412895 2 14.84286544616217 16.272716801985286 3 4.572528513181767 7.519517895708826 4 1.8968563208423876 4.159170725502333 5 0.9631918121188376 2.639946383912941 6 0.5845044174101328 1.9224336881293658 7 0.38683671905403544 1.4843559285859342 8 0.27827697598608897 1.2203364476110232 9 0.2051638344877921 1.0121750715402504 >10 1.0924617956702483 10.552415354013188 >50 0.07628327328667849 2.9219276128604585 >100 0.055708252218369024 6.197159245231939 >500 0.004642265021839977 1.7043015559852128 >1k 0.001832473034936833 1.259776851520386 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1712 0.11399296998961944 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.658467873225434E-5 2 0.0 0.0 0.0 0.0 6.658467873225434E-5 3 0.0 0.0 0.0 0.0 6.658467873225434E-5 4 0.0 0.0 0.0 0.0 6.658467873225434E-5 5 0.0 0.0 0.0 0.0 6.658467873225434E-5 6 0.0 0.0 0.0 0.0 1.9975403619676305E-4 7 0.0 0.0 0.0 0.0 1.9975403619676305E-4 8 0.0 0.0 0.0 0.0 1.9975403619676305E-4 9 0.0 0.0 0.0 0.0 1.9975403619676305E-4 10 0.0 0.0 0.0 0.0 1.9975403619676305E-4 11 0.0 0.0 0.0 0.0 1.9975403619676305E-4 12 0.0 0.0 0.0 0.0 5.992621085902891E-4 13 0.0 0.0 0.0 0.0 6.658467873225435E-4 14 0.0 0.0 0.0 0.0 6.658467873225435E-4 15 0.0 0.0 0.0 0.0 7.990161447870522E-4 16 0.0 0.0 0.0 0.0 7.990161447870522E-4 17 0.0 0.0 0.0 0.0 7.990161447870522E-4 18 0.0 0.0 0.0 0.0 0.0010653548597160695 19 0.0 0.0 0.0 6.658467873225434E-5 0.001131939538448324 20 0.0 0.0 0.0 1.9975403619676305E-4 0.001331693574645087 21 0.0 0.0 0.0 2.663387149290174E-4 0.0013982782533773414 22 0.0 0.0 0.0 3.995080723935261E-4 0.0015980322895741044 23 0.0 0.0 0.0 7.324314660547979E-4 0.0015980322895741044 24 0.0 0.0 0.0 0.001331693574645087 0.0015980322895741044 25 6.658467873225434E-5 0.0 0.0 0.0015980322895741044 0.0015980322895741044 26 6.658467873225434E-5 0.0 0.0 0.0019975403619676307 0.0017977863257708675 27 6.658467873225434E-5 0.0 0.0 0.0023304637556289024 0.0017977863257708675 28 6.658467873225434E-5 0.0 0.0 0.0040616654026675155 0.001864371004503122 29 6.658467873225434E-5 0.0 0.0 0.006525298515760927 0.001864371004503122 30 6.658467873225434E-5 0.0 0.0 0.011718903456876767 0.001864371004503122 31 6.658467873225434E-5 0.0 0.0 0.022838544805163244 0.001864371004503122 32 6.658467873225434E-5 0.0 0.0 0.03389160147471747 0.001930955683235376 33 6.658467873225434E-5 0.0 0.0 0.04567708961032649 0.0019975403619676307 34 6.658467873225434E-5 0.0 0.0 0.056064299492558166 0.002064125040699885 35 6.658467873225434E-5 0.0 0.0 0.0704465900987251 0.002064125040699885 36 6.658467873225434E-5 0.0 0.0 0.0886907920713628 0.002064125040699885 37 6.658467873225434E-5 0.0 0.0 0.11539124824299679 0.002064125040699885 38 6.658467873225434E-5 0.0 0.0 0.153144761084185 0.002064125040699885 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 40 7.0352945E-4 27.498419 5 GTATCAA 2275 0.0 26.121431 1 TAGATCG 55 1.5944905E-4 23.998621 5 GGTATCA 1085 0.0 22.922571 1 ATACCGT 300 0.0 21.998734 6 TACGAAT 315 0.0 21.651712 41 CGCAATA 360 0.0 20.77866 36 CGTCGTA 300 0.0 20.532152 10 ATACGAA 345 0.0 20.40666 40 ACCGTCG 285 0.0 19.297136 8 TAGCGGC 370 0.0 19.027832 30 CTAGCGG 395 0.0 18.937511 29 TACCGTC 340 0.0 18.763626 7 GTACGCT 60 0.007415376 18.33228 3 CAATACG 385 0.0 18.28649 38 CGAATGC 375 0.0 18.187437 43 GCGCAAT 390 0.0 18.051447 35 CCGTGTA 135 5.5319106E-8 17.924894 9 AACGCAG 3335 0.0 17.744106 6 TCTAGCG 400 0.0 17.600746 28 >>END_MODULE