##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062314_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1404799 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.953615428256995 32.0 32.0 32.0 32.0 32.0 2 31.284467742360295 32.0 32.0 32.0 32.0 32.0 3 31.470453780220517 32.0 32.0 32.0 32.0 32.0 4 31.585515792650764 32.0 32.0 32.0 32.0 32.0 5 31.515564148322998 32.0 32.0 32.0 32.0 32.0 6 35.18118819845402 36.0 36.0 36.0 36.0 36.0 7 35.18858142695147 36.0 36.0 36.0 36.0 36.0 8 35.12686868370493 36.0 36.0 36.0 36.0 36.0 9 35.24518667795179 36.0 36.0 36.0 36.0 36.0 10 35.083921614408894 36.0 36.0 36.0 36.0 36.0 11 35.26195633681402 36.0 36.0 36.0 36.0 36.0 12 35.15534037253728 36.0 36.0 36.0 36.0 36.0 13 35.21086860113084 36.0 36.0 36.0 36.0 36.0 14 35.16488764584827 36.0 36.0 36.0 36.0 36.0 15 35.13571763647326 36.0 36.0 36.0 36.0 36.0 16 35.15490614671565 36.0 36.0 36.0 36.0 36.0 17 35.13208935940302 36.0 36.0 36.0 36.0 36.0 18 35.1280005182236 36.0 36.0 36.0 36.0 36.0 19 35.11731785116589 36.0 36.0 36.0 36.0 36.0 20 35.12630205459998 36.0 36.0 36.0 36.0 36.0 21 35.11872659362656 36.0 36.0 36.0 36.0 36.0 22 35.10128139328118 36.0 36.0 36.0 36.0 36.0 23 35.06246658774672 36.0 36.0 36.0 36.0 36.0 24 35.046657208611336 36.0 36.0 36.0 36.0 36.0 25 35.03476084478989 36.0 36.0 36.0 36.0 36.0 26 34.99615816924699 36.0 36.0 36.0 36.0 36.0 27 34.981553944728034 36.0 36.0 36.0 36.0 36.0 28 34.963141346199706 36.0 36.0 36.0 36.0 36.0 29 34.9459880025541 36.0 36.0 36.0 36.0 36.0 30 34.91867448652797 36.0 36.0 36.0 32.0 36.0 31 34.92995012097816 36.0 36.0 36.0 32.0 36.0 32 34.89569539841643 36.0 36.0 36.0 32.0 36.0 33 34.86866377325155 36.0 36.0 36.0 32.0 36.0 34 34.86271132026717 36.0 36.0 36.0 32.0 36.0 35 34.85321316430322 36.0 36.0 36.0 32.0 36.0 36 34.82109753779722 36.0 36.0 36.0 32.0 36.0 37 34.81776823588286 36.0 36.0 36.0 32.0 36.0 38 34.80039137271596 36.0 36.0 36.0 32.0 36.0 39 34.78572450578339 36.0 36.0 36.0 32.0 36.0 40 34.77126620961433 36.0 36.0 36.0 32.0 36.0 41 34.74336399726936 36.0 36.0 36.0 32.0 36.0 42 34.716170783151185 36.0 36.0 36.0 32.0 36.0 43 34.702917641598546 36.0 36.0 36.0 32.0 36.0 44 34.65555143476042 36.0 36.0 36.0 32.0 36.0 45 34.641035479097006 36.0 36.0 36.0 32.0 36.0 46 34.627181539850184 36.0 36.0 36.0 32.0 36.0 47 34.591033307967905 36.0 36.0 36.0 32.0 36.0 48 34.5680955069017 36.0 36.0 36.0 32.0 36.0 49 34.55884436136415 36.0 36.0 36.0 32.0 36.0 50 34.11936440729243 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 10.0 21 27.0 22 77.0 23 227.0 24 577.0 25 1426.0 26 3039.0 27 6025.0 28 10656.0 29 17557.0 30 27140.0 31 41817.0 32 65944.0 33 115491.0 34 259502.0 35 855280.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.92404598198773 18.328709690282373 12.467530063173966 26.27971426455593 2 16.115591579645756 19.920070561150503 36.95932126893323 27.005016590270504 3 18.531445135094348 23.150122864814534 28.625295060635136 29.69313693945598 4 12.950820722395163 15.83023621172851 35.06864683132604 36.15029623455028 5 14.86952937751237 36.32434248600689 33.10708507053322 15.699043065947512 6 35.14199580721743 34.790343074968234 16.18713050658637 13.880530611227973 7 30.772160287699524 30.158549372543686 20.064792187352072 19.00449815240472 8 28.237562811476945 33.20119106007336 18.90434147518613 19.656904653263563 9 27.121317711644156 14.396507970179364 18.545215365329845 39.93695895284664 10 16.363016409500027 26.729646155028913 31.220333770882036 25.68700366458902 11 37.1301517156547 21.25236421722965 21.92975649897245 19.687727568143202 12 24.317856148815594 23.46819722963926 28.59220429399508 23.621742327550063 13 29.421006136821 19.52919955096779 25.181324872810983 25.868469439400226 14 23.554757655721566 19.15071124054046 25.04336919374231 32.25116190999566 15 25.212646079617084 27.09654548444297 21.96591825592131 25.724890180018633 16 25.757283467789872 25.893317938397953 23.489330441325436 24.86006815248674 17 24.166375403171557 26.087504333360144 24.995817907045776 24.75030235642252 18 24.850832646401834 25.281997838835192 25.704976800935082 24.162192713827896 19 25.540735720910963 25.127865267557848 25.27329532552344 24.058103686007748 20 25.698322033946564 24.49330721328933 24.991244280308315 24.817126472455787 21 26.280983969948725 24.348038402646928 24.79564692173044 24.57533070567391 22 25.71698869375619 24.228021232930832 25.11241821783757 24.94257185547541 23 24.667407461718668 24.36344895383461 25.431645995827157 25.53749758861957 24 24.687249518434733 24.70355084090621 25.36692212523687 25.24227751542219 25 24.958623915056766 24.42046786831122 25.42388686763995 25.19702134899206 26 24.70632704866336 25.011069238621463 25.63237029770913 24.650233415006042 27 25.13382726032819 24.78779837072429 25.094675668210904 24.98369870073662 28 24.933370349805664 24.605916940730932 25.469610899927392 24.991101809536012 29 24.888506387792045 24.842876759427927 25.360890496722284 24.90772635605774 30 24.818085653147605 24.95824974978324 25.336529084228015 24.887135512841137 31 25.206257999393504 24.628094937763116 24.971419297064195 25.194227765779182 32 25.102222120980876 24.79648116721147 24.83008063873165 25.271216073076 33 24.781124648080326 24.56472296669621 25.258845596688484 25.39530678853498 34 25.282676909759793 24.604138429822665 25.364611214250733 24.748573446166812 35 25.504113417421642 24.619855024904027 25.253400323036917 24.622631234637417 36 24.848073701961784 24.97827081997134 25.05023871844464 25.123416759622234 37 25.521938204566748 24.67190218428149 25.065776173079605 24.74038343807216 38 25.016674983396204 24.604018083725858 25.22175770341522 25.157549229462724 39 25.40146712842179 24.601131133945763 24.939901835512195 25.057499902120256 40 25.503079088182723 24.800558656434124 25.09633050706898 24.600031748314173 41 24.826610724615193 24.938656180616707 25.39616326176139 24.838569833006712 42 25.621237284986442 24.92801143559257 24.97905301846538 24.47169826095561 43 25.11331334851534 24.358080859494297 25.279964235196296 25.248641556794066 44 24.864406574545953 24.811728199517212 25.083520139868202 25.240345086068633 45 25.042943309137012 25.042302629846112 24.89281079530368 25.021943265713194 46 24.919879438308946 24.839296163467303 24.941591363067516 25.29923303515623 47 25.03457834352828 24.89014301873388 25.20421332577818 24.871065311959658 48 25.507705274667696 25.145078989031518 24.515644042507148 24.831571693793638 49 25.04378009436568 25.124933440019138 24.728990537804645 25.10229592781054 50 25.190296836726635 25.262123081281825 24.671709927326646 24.8758701546649 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 143.0 1 95.5 2 48.0 3 134.0 4 220.0 5 233.0 6 246.0 7 198.0 8 150.0 9 206.0 10 262.0 11 451.5 12 641.0 13 1202.5 14 1764.0 15 2220.5 16 2677.0 17 2669.5 18 2662.0 19 2580.0 20 2498.0 21 2989.0 22 3480.0 23 4433.0 24 5386.0 25 6794.0 26 8202.0 27 10171.5 28 12141.0 29 14127.5 30 16114.0 31 18747.5 32 21381.0 33 24958.0 34 28535.0 35 33305.5 36 38076.0 37 43687.5 38 49299.0 39 54694.0 40 60089.0 41 65797.0 42 71505.0 43 75363.5 44 79222.0 45 85933.5 46 92645.0 47 97857.5 48 103070.0 49 106628.0 50 110186.0 51 109396.5 52 108607.0 53 107403.0 54 106199.0 55 105214.5 56 104230.0 57 99833.0 58 95436.0 59 87789.5 60 80143.0 61 70700.5 62 61258.0 63 53099.0 64 44940.0 65 37740.5 66 30541.0 67 26032.5 68 21524.0 69 18763.5 70 16003.0 71 12580.0 72 9157.0 73 7930.5 74 6704.0 75 5043.0 76 3382.0 77 2894.5 78 2407.0 79 1994.0 80 1581.0 81 1273.0 82 965.0 83 788.5 84 612.0 85 432.5 86 253.0 87 181.0 88 109.0 89 70.0 90 31.0 91 25.5 92 20.0 93 18.0 94 16.0 95 13.5 96 11.0 97 15.0 98 19.0 99 14.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03011106927040808 2 0.004271073655377032 3 2.1355368276885164E-4 4 0.0 5 0.0 6 2.847382436918022E-4 7 0.0 8 0.0 9 0.0 10 2.1355368276885164E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.694764873836044E-4 17 0.0 18 7.118456092295055E-5 19 0.0 20 2.1355368276885164E-4 21 0.0 22 0.0 23 1.423691218459011E-4 24 3.5592280461475275E-4 25 1.423691218459011E-4 26 3.5592280461475275E-4 27 2.1355368276885164E-4 28 0.0013525066575360604 29 7.118456092295055E-4 30 0.0012101375356901591 31 3.5592280461475275E-4 32 0.001067768413844258 33 2.847382436918022E-4 34 0.001067768413844258 35 4.2710736553770327E-4 36 4.2710736553770327E-4 37 0.002491459632303269 38 0.0 39 9.965838529213077E-4 40 0.0 41 8.542147310754065E-4 42 0.004413442777222934 43 0.004698181020914736 44 0.003416858924301626 45 0.002847382436918022 46 0.0029185669978409722 47 0.0012813220966131098 48 0.0033456743633786755 49 0.0036304126070704776 50 0.001423691218459011 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1404799.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.249676842455465 #Duplication Level Percentage of deduplicated Percentage of total 1 77.63274765824237 45.99715211142751 2 13.5114864028119 16.011024060556725 3 3.85329226332111 6.8491896414392865 4 1.5738112343004904 3.7299122817332013 5 0.8880682482959704 2.6308878362790873 6 0.5502194268454551 1.9560193939820572 7 0.38017088040434327 1.5767501266208388 8 0.2676386829841522 1.2686004381881122 9 0.19974269072855821 1.065122088957864 >10 1.0450220066203164 10.923174414154747 >50 0.05697726593172865 2.3300826133147603 >100 0.037924587059529544 4.459088284038891 >500 0.0027778752685241543 1.1266420909718682 >1k 1.207771855880067E-4 0.07635461833504721 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 2.1355368276885164E-4 6 0.0 0.0 0.0 0.0 2.1355368276885164E-4 7 0.0 0.0 0.0 0.0 2.1355368276885164E-4 8 0.0 0.0 0.0 0.0 2.1355368276885164E-4 9 0.0 0.0 0.0 0.0 2.1355368276885164E-4 10 0.0 0.0 0.0 0.0 2.1355368276885164E-4 11 0.0 0.0 0.0 0.0 2.847382436918022E-4 12 0.0 0.0 0.0 0.0 4.2710736553770327E-4 13 0.0 0.0 0.0 0.0 4.982919264606538E-4 14 0.0 0.0 0.0 0.0 4.982919264606538E-4 15 0.0 0.0 0.0 0.0 6.406610483065549E-4 16 0.0 0.0 0.0 0.0 6.406610483065549E-4 17 0.0 0.0 0.0 0.0 6.406610483065549E-4 18 0.0 0.0 0.0 0.0 6.406610483065549E-4 19 0.0 0.0 0.0 7.118456092295055E-5 6.406610483065549E-4 20 0.0 0.0 0.0 7.118456092295055E-5 6.406610483065549E-4 21 0.0 0.0 0.0 7.118456092295055E-5 6.406610483065549E-4 22 0.0 0.0 0.0 2.847382436918022E-4 6.406610483065549E-4 23 0.0 0.0 0.0 2.847382436918022E-4 7.118456092295054E-4 24 0.0 0.0 0.0 7.83030170152456E-4 7.118456092295054E-4 25 0.0 0.0 0.0 0.001067768413844258 7.118456092295054E-4 26 0.0 0.0 0.0 0.0013525066575360604 7.118456092295054E-4 27 0.0 0.0 0.0 0.0019219831449196647 7.118456092295054E-4 28 0.0 0.0 0.0 0.003132120680609824 7.118456092295054E-4 29 0.0 0.0 0.0 0.005979503117527846 7.118456092295054E-4 30 0.0 0.0 0.0 0.009467546602752423 7.118456092295054E-4 31 0.0 0.0 0.0 0.01843680127904419 8.542147310754065E-4 32 0.0 0.0 0.0 0.025412888249493344 9.965838529213077E-4 33 0.0 0.0 0.0 0.033527928194709705 9.965838529213077E-4 34 0.0 0.0 0.0 0.04199889094454082 0.001067768413844258 35 0.0 0.0 0.0 0.053317236131289955 0.001067768413844258 36 0.0 0.0 0.0 0.06705585638941941 0.001067768413844258 37 0.0 0.0 0.0 0.08613331871677016 0.001067768413844258 38 0.0 0.0 0.0 0.1106919922351881 0.001067768413844258 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 735 0.0 26.947037 1 GTATCAA 1645 0.0 26.354586 1 CGTCTTA 50 0.00258085 21.999699 15 ATTATAC 120 1.4320904E-8 20.166388 3 ACCGTAT 60 0.0074132746 18.33308 8 TCAACGC 2425 0.0 17.418316 4 ATCAACG 2470 0.0 17.279114 3 TATCAAC 2580 0.0 16.969362 2 CAACGCA 2490 0.0 16.963623 5 TCTAGCG 265 0.0 16.603544 28 TACACCG 80 0.001988749 16.499773 5 AACGCAG 2590 0.0 16.223715 6 GGCGTTA 350 0.0 15.714629 42 CTAGCGG 280 0.0 15.714069 29 TCTACAC 365 0.0 15.671017 3 CGAGCCG 295 0.0 15.660802 15 TCCGTAC 85 0.0029805358 15.529198 3 TACGAAT 285 0.0 15.438933 41 CGCAATA 305 0.0 15.147872 36 TAAGACT 220 3.0559022E-10 14.999794 4 >>END_MODULE