##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062312_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1531080 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21839681793244 32.0 32.0 32.0 32.0 32.0 2 31.335911905321733 32.0 32.0 32.0 32.0 32.0 3 31.49922473025577 32.0 32.0 32.0 32.0 32.0 4 31.592176110980486 32.0 32.0 32.0 32.0 32.0 5 31.553799932074092 32.0 32.0 32.0 32.0 32.0 6 35.172930872325416 36.0 36.0 36.0 36.0 36.0 7 35.18905282545654 36.0 36.0 36.0 36.0 36.0 8 35.125849073856365 36.0 36.0 36.0 36.0 36.0 9 35.238101862737416 36.0 36.0 36.0 36.0 36.0 10 35.0881730543146 36.0 36.0 36.0 36.0 36.0 11 35.22691760064791 36.0 36.0 36.0 36.0 36.0 12 35.15874937952295 36.0 36.0 36.0 36.0 36.0 13 35.18752710505003 36.0 36.0 36.0 36.0 36.0 14 35.15231013402304 36.0 36.0 36.0 36.0 36.0 15 35.116835828304204 36.0 36.0 36.0 36.0 36.0 16 35.143307338610654 36.0 36.0 36.0 36.0 36.0 17 35.12612143062413 36.0 36.0 36.0 36.0 36.0 18 35.118797842046135 36.0 36.0 36.0 36.0 36.0 19 35.11359628497531 36.0 36.0 36.0 36.0 36.0 20 35.11849740052773 36.0 36.0 36.0 36.0 36.0 21 35.1176104449147 36.0 36.0 36.0 36.0 36.0 22 35.089737309611515 36.0 36.0 36.0 36.0 36.0 23 35.05472934137994 36.0 36.0 36.0 36.0 36.0 24 35.04656712908535 36.0 36.0 36.0 36.0 36.0 25 35.03575254069023 36.0 36.0 36.0 36.0 36.0 26 34.99719675000653 36.0 36.0 36.0 36.0 36.0 27 34.98109439088748 36.0 36.0 36.0 36.0 36.0 28 34.95624265224547 36.0 36.0 36.0 36.0 36.0 29 34.94288280168247 36.0 36.0 36.0 36.0 36.0 30 34.919768398777336 36.0 36.0 36.0 32.0 36.0 31 34.92543629333542 36.0 36.0 36.0 32.0 36.0 32 34.89504010241137 36.0 36.0 36.0 32.0 36.0 33 34.87298704182668 36.0 36.0 36.0 32.0 36.0 34 34.86612848446848 36.0 36.0 36.0 32.0 36.0 35 34.858399299840634 36.0 36.0 36.0 32.0 36.0 36 34.83030344593359 36.0 36.0 36.0 32.0 36.0 37 34.82562178331635 36.0 36.0 36.0 32.0 36.0 38 34.8169272670272 36.0 36.0 36.0 32.0 36.0 39 34.79742730621522 36.0 36.0 36.0 32.0 36.0 40 34.78523133996917 36.0 36.0 36.0 32.0 36.0 41 34.77039279462863 36.0 36.0 36.0 32.0 36.0 42 34.74537973195392 36.0 36.0 36.0 32.0 36.0 43 34.729111476866 36.0 36.0 36.0 32.0 36.0 44 34.705436685215666 36.0 36.0 36.0 32.0 36.0 45 34.68906654126499 36.0 36.0 36.0 32.0 36.0 46 34.67841784883873 36.0 36.0 36.0 32.0 36.0 47 34.65109661154218 36.0 36.0 36.0 32.0 36.0 48 34.63222365911644 36.0 36.0 36.0 32.0 36.0 49 34.61638973796275 36.0 36.0 36.0 32.0 36.0 50 34.17332536510176 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 10.0 21 18.0 22 77.0 23 222.0 24 675.0 25 1544.0 26 3306.0 27 6704.0 28 11991.0 29 19611.0 30 30373.0 31 45530.0 32 70178.0 33 120090.0 34 269648.0 35 951099.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.256338138591346 17.78219865870908 12.161778108799403 26.799685093900166 2 15.973452801387843 19.57839568545972 37.25112001301103 27.19703150014141 3 18.647849349997912 22.788673556828158 28.66638538226811 29.89709171090582 4 13.13001280142122 15.701335005355697 34.8518039553779 36.31684823784518 5 14.818895693821155 36.20505538904263 33.693950475449014 15.282098441687204 6 35.59492070292957 34.45892371257376 16.07814885982295 13.868006724673727 7 30.670049899417407 30.045262167881496 20.2505421010006 19.0341458317005 8 27.702928651670717 34.380959845337934 18.761462497060897 19.154649005930455 9 26.502011651905843 14.882762494448363 18.47721869530005 40.138007158345744 10 15.759811061226142 27.75580342738907 32.19561642189359 24.288769089491193 11 36.87534289521122 21.470138725605455 21.798142487655774 19.85637589152755 12 23.749314209577555 23.53358413668783 29.352744467957258 23.364357185777358 13 29.718434046555377 19.94938213548606 24.712751783055097 25.61943203490347 14 22.855566005695326 19.16085377641926 25.587950988844476 32.39562922904094 15 24.860947827677197 27.203607910755807 22.17258405831178 25.762860203255215 16 25.31122066426834 26.232081135521085 23.71847625317752 24.73822194703305 17 23.94433994304674 26.289416620947303 25.426235075894137 24.340008360111817 18 24.39325469162597 26.05985713343335 25.460933106652238 24.085955068288442 19 25.147412284139296 25.654440003135043 25.33649450061394 23.86165321211171 20 25.35695508058064 25.204186600917655 25.37935764087324 24.059500677628463 21 25.224563853334804 25.01993692030261 25.307446578524033 24.44805264783855 22 25.133500535569663 24.982430702510648 25.28319878778379 24.600869974135904 23 24.765149283609794 25.056185866307356 25.255261158960447 24.923403691122402 24 24.507009504501447 25.183728439830077 25.420034694826604 24.889227360841872 25 24.74726891058172 24.900298744541413 25.53900072759383 24.813431617283033 26 24.697190278477176 25.090116303752197 25.45685161490898 24.755841802861646 27 24.66456399360707 25.434680520186248 25.121500234803573 24.779255251403107 28 24.825332630549042 25.21499908886237 25.19697227986229 24.762696000726297 29 24.649477391969413 25.585750105645005 25.251278353518554 24.513494148867036 30 24.85999950361382 25.364615241929478 25.15273672069003 24.622648533766668 31 24.78310933980201 25.219470553619 25.153830227337597 24.843589879241392 32 24.700797872340424 25.421077519541864 25.20051310454374 24.677611503573964 33 24.616479870418267 25.33734357447031 25.25328526269039 24.792891292421036 34 24.828910053518268 25.15632898908342 25.298256247607874 24.71650470979043 35 24.685041967190415 25.23047501856536 25.45587191238586 24.628611101858368 36 24.90033153155036 25.300311676232923 25.292147483207888 24.50720930900883 37 25.049818524065397 25.055566187281077 25.20160908444297 24.693006204210555 38 24.809546202680462 25.30514408130209 25.27588368994435 24.6094260260731 39 24.826935323220614 25.40345835442418 25.169113204774423 24.600493117580786 40 24.99237465865576 25.180803864464213 25.20144290399124 24.625378572888792 41 24.67999503615119 25.218833887412075 25.360826088944332 24.740344987492406 42 24.730179175135987 25.22396891998516 25.310186177022313 24.735665727856535 43 24.80201120690049 25.08561280348212 25.253605273866263 24.85877071575112 44 24.760729063588947 25.207821006463078 25.390511461425664 24.64093846852231 45 24.69786857160399 25.296677615658385 25.25905610503717 24.746397707700456 46 24.77379947003794 25.099392378970553 25.29429092265258 24.832517228338926 47 24.701939694304492 25.316805415311944 25.271346891642814 24.709907998740746 48 24.674335608063622 25.389804470733313 25.17243361305897 24.763426308144094 49 24.682333884167967 25.252480388762972 25.269332009588442 24.795853717480618 50 24.68729242362986 25.443564373249174 25.30777636191326 24.56136684120771 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 82.0 1 65.5 2 49.0 3 126.0 4 203.0 5 212.0 6 221.0 7 173.0 8 125.0 9 181.0 10 237.0 11 432.5 12 628.0 13 1078.5 14 1529.0 15 1897.5 16 2266.0 17 2368.0 18 2470.0 19 2768.5 20 3067.0 21 3896.5 22 4726.0 23 6013.0 24 7300.0 25 8882.5 26 10465.0 27 12579.0 28 14693.0 29 17502.5 30 20312.0 31 23827.0 32 27342.0 33 31121.5 34 34901.0 35 39470.5 36 44040.0 37 48578.5 38 53117.0 39 59511.5 40 65906.0 41 71580.0 42 77254.0 43 83556.5 44 89859.0 45 96603.0 46 103347.0 47 107242.5 48 111138.0 49 114001.0 50 116864.0 51 119767.5 52 122671.0 53 121998.0 54 121325.0 55 117169.5 56 113014.0 57 107531.0 58 102048.0 59 93621.5 60 85195.0 61 74949.0 62 64703.0 63 56032.0 64 47361.0 65 39708.0 66 32055.0 67 26060.5 68 20066.0 69 16081.0 70 12096.0 71 9705.5 72 7315.0 73 5940.5 74 4566.0 75 3690.0 76 2814.0 77 2244.0 78 1674.0 79 1382.0 80 1090.0 81 828.0 82 566.0 83 389.0 84 212.0 85 154.0 86 96.0 87 61.5 88 27.0 89 20.5 90 14.0 91 9.5 92 5.0 93 7.5 94 10.0 95 7.0 96 4.0 97 5.5 98 7.0 99 6.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030370718708362724 2 0.004637249523212373 3 5.225069885309715E-4 4 0.0 5 6.531337356637144E-5 6 1.3062674713274289E-4 7 0.0 8 0.0 9 0.0 10 1.3062674713274289E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.837604827964574E-4 17 0.0 18 6.531337356637144E-5 19 0.0 20 3.2656686783185724E-4 21 6.531337356637144E-5 22 0.0 23 6.531337356637144E-5 24 0.001045013977061943 25 3.918802413982287E-4 26 1.9594012069911436E-4 27 8.490738563628288E-4 28 0.0017634610862920293 29 5.878203620973431E-4 30 9.143872299292003E-4 31 5.878203620973431E-4 32 5.225069885309715E-4 33 0.0 34 9.143872299292003E-4 35 1.9594012069911436E-4 36 2.6125349426548577E-4 37 0.0015022075920265434 38 0.0 39 3.2656686783185724E-4 40 6.531337356637144E-5 41 6.531337356637145E-4 42 0.004180055908247772 43 0.0038534890404159157 44 0.004898503017477859 45 0.00267784831622123 46 0.0017634610862920293 47 9.143872299292003E-4 48 0.003657548919716801 49 0.004571936149646002 50 0.0011103273506283147 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1531080.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.2189709939337 #Duplication Level Percentage of deduplicated Percentage of total 1 66.296961013507 35.94553006177289 2 17.26852267738949 18.725630603069344 3 7.083690834114599 11.522112835945604 4 3.5390182439960385 7.675277100728936 5 1.922533178430989 5.211888531811248 6 1.1651901379138445 3.7905246173981006 7 0.7388324804209526 2.8041115777723804 8 0.4809432831361275 2.086099993446795 9 0.32569588593239684 1.5893006212990946 >10 1.1576022948292903 9.737383625708663 >50 0.018225469964382537 0.639489959065812 >100 0.002542412986608962 0.18313300332828822 >500 2.420873782895988E-4 0.08951746865290187 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.9594012069911436E-4 2 0.0 0.0 0.0 0.0 1.9594012069911436E-4 3 0.0 0.0 0.0 0.0 1.9594012069911436E-4 4 0.0 0.0 0.0 0.0 1.9594012069911436E-4 5 0.0 0.0 0.0 0.0 1.9594012069911436E-4 6 0.0 0.0 0.0 0.0 3.2656686783185724E-4 7 0.0 0.0 0.0 0.0 3.2656686783185724E-4 8 0.0 0.0 0.0 0.0 3.2656686783185724E-4 9 0.0 0.0 0.0 0.0 3.2656686783185724E-4 10 0.0 0.0 0.0 0.0 3.2656686783185724E-4 11 0.0 0.0 0.0 0.0 3.2656686783185724E-4 12 0.0 0.0 0.0 0.0 5.225069885309717E-4 13 0.0 0.0 0.0 0.0 6.531337356637145E-4 14 0.0 0.0 0.0 0.0 6.531337356637145E-4 15 0.0 0.0 0.0 6.531337356637146E-5 7.184471092300859E-4 16 0.0 0.0 0.0 6.531337356637146E-5 7.837604827964574E-4 17 0.0 0.0 0.0 6.531337356637146E-5 7.837604827964574E-4 18 0.0 0.0 0.0 1.306267471327429E-4 9.143872299292003E-4 19 0.0 0.0 0.0 1.9594012069911436E-4 9.143872299292003E-4 20 0.0 0.0 0.0 1.9594012069911436E-4 0.0011103273506283147 21 0.0 0.0 0.0 3.918802413982287E-4 0.0011756407241946861 22 0.0 0.0 0.0 6.531337356637145E-4 0.0011756407241946861 23 0.0 0.0 0.0 0.001306267471327429 0.0011756407241946861 24 0.0 0.0 0.0 0.0015022075920265434 0.0011756407241946861 25 0.0 0.0 0.0 0.0018940878334247721 0.0011756407241946861 26 0.0 0.0 0.0 0.002481908195522115 0.0011756407241946861 27 0.0 0.0 0.0 0.0029391018104867155 0.001306267471327429 28 0.0 0.0 0.0 0.0037228622932831724 0.001306267471327429 29 0.0 0.0 0.0 0.007249784465867231 0.001306267471327429 30 0.0 0.0 0.0 0.012997361339707919 0.001306267471327429 31 0.0 0.0 0.0 0.020573712673407008 0.0013715808448938004 32 0.0 0.0 0.0 0.03095853907046007 0.0013715808448938004 33 0.0 0.0 0.0 0.040820858478982154 0.0015022075920265434 34 0.0 0.0 0.0 0.05172819186456619 0.0016328343391592863 35 0.0 0.0 0.0 0.06309271886511482 0.0016328343391592863 36 0.0 0.0 0.0 0.08033544948663689 0.0016328343391592863 37 0.0 0.0 0.0 0.10691799252815007 0.0016328343391592863 38 0.0 0.0 0.0 0.14316691485748623 0.0016328343391592863 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAACGC 40 7.0354063E-4 27.498388 11 GTATCAA 1060 0.0 25.123222 1 GGTATCA 510 0.0 20.71414 1 ATCAACG 1540 0.0 16.856153 3 TCAACGC 1540 0.0 16.856153 4 AACGCAG 1575 0.0 16.621248 6 CAACGCA 1565 0.0 16.586887 5 TATCAAC 1645 0.0 16.048216 2 CGCAATA 85 0.002979644 15.530024 36 GTCCTAG 330 0.0 15.339447 1 ATAAGAC 170 7.599192E-7 14.23446 3 GCACCGT 155 4.5710276E-6 14.192717 6 CCCTTAA 210 3.9963197E-8 13.624477 1 GCATAAG 130 2.3232834E-4 13.5438595 1 TAAGACC 245 1.5352271E-9 13.468597 4 TGCACCG 215 5.472066E-8 13.301546 5 TATAAGA 265 3.4924597E-10 13.282674 2 GCTCTAT 250 2.062734E-9 13.205263 1 TCGCGGT 100 0.008765288 13.199226 17 GTATTAT 340 0.0 12.946337 1 >>END_MODULE