##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062311_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1059031 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21869803622368 32.0 32.0 32.0 32.0 32.0 2 30.78513660128929 32.0 32.0 32.0 32.0 32.0 3 30.810010282985107 32.0 32.0 32.0 32.0 32.0 4 30.814267004459737 32.0 32.0 32.0 32.0 32.0 5 30.76165003668448 32.0 32.0 32.0 32.0 32.0 6 34.40788229995156 36.0 36.0 36.0 32.0 36.0 7 34.333536978615356 36.0 36.0 36.0 32.0 36.0 8 34.288621390686394 36.0 36.0 36.0 32.0 36.0 9 34.38992531852231 36.0 36.0 36.0 32.0 36.0 10 34.11084000373927 36.0 36.0 36.0 32.0 36.0 11 34.390478654543635 36.0 36.0 36.0 32.0 36.0 12 34.22281500730384 36.0 36.0 36.0 32.0 36.0 13 34.30674267325508 36.0 36.0 36.0 32.0 36.0 14 34.209562326315286 36.0 36.0 36.0 32.0 36.0 15 34.17672381639442 36.0 36.0 36.0 32.0 36.0 16 34.17996073769323 36.0 36.0 36.0 32.0 36.0 17 34.11249151346844 36.0 36.0 36.0 32.0 36.0 18 34.11877367140339 36.0 36.0 36.0 32.0 36.0 19 34.1256582668496 36.0 36.0 36.0 32.0 36.0 20 34.093069985675584 36.0 36.0 36.0 32.0 36.0 21 34.07834425998861 36.0 36.0 36.0 32.0 36.0 22 34.052142005285965 36.0 36.0 36.0 32.0 36.0 23 34.02204562472676 36.0 36.0 36.0 32.0 36.0 24 34.01400053445083 36.0 36.0 36.0 32.0 36.0 25 33.649622154592265 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 16.0 5 85.0 6 218.0 7 52.0 8 166.0 9 151.0 10 75.0 11 30.0 12 45.0 13 43.0 14 220.0 15 292.0 16 459.0 17 571.0 18 796.0 19 1055.0 20 1624.0 21 2300.0 22 3437.0 23 5018.0 24 6970.0 25 9499.0 26 12657.0 27 16238.0 28 21010.0 29 27205.0 30 35176.0 31 47307.0 32 66359.0 33 94784.0 34 212567.0 35 492605.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.75881475326245 17.105059394534567 11.381088175860702 25.75503767634228 2 16.883201498731385 19.39521958322199 37.5479802724949 26.173598645551728 3 19.694680563765438 22.92870214216513 27.835587929240376 29.541029364829058 4 12.966455350136036 15.39412437424274 35.283879661956504 36.355540613664715 5 14.877772320247857 36.35725620584124 33.29353534590244 15.471436128008465 6 34.604151844387566 34.944391060618514 16.519506827933064 13.931950267060856 7 30.73949713287467 30.113323766795798 19.91172694908749 19.235452151242043 8 28.025631839592098 33.151432598262794 18.994936208707223 19.827999353437885 9 27.055832812590108 14.672101933950534 18.56496086626463 39.707104387194725 10 16.294888523288137 26.69531589795957 30.96981902762807 26.039976551124223 11 37.05017399198124 21.591270141463045 21.792968454497313 19.5655874120584 12 24.5873506193641 23.744796084026635 28.396952772128287 23.270900524480982 13 29.351988245816734 19.714163072274236 24.90493218085861 26.028916501050425 14 23.596554002762318 19.60480503532308 24.993595239963433 31.80504572195117 15 25.152820838663743 27.046806434501907 22.1812178579837 25.619154868850647 16 25.628675149842124 26.14352700939704 23.45950953884551 24.76828830191533 17 23.913119523053634 26.15102734254237 24.905906900538795 25.029946233865196 18 24.58314072586782 25.500566714972145 25.7870909986378 24.12920156052223 19 25.351910329854793 25.219492046869078 25.444915033964676 23.983682589311453 20 25.76738084414019 24.509402701392283 24.8739422728858 24.849274181581727 21 26.471260934983633 24.458070906327738 24.65200855896385 24.418659599724784 22 25.77851465906427 24.568111525344264 24.96814479843314 24.685229017158328 23 24.390006492358957 24.729744926840468 25.420562160793146 25.459686420007426 24 24.4922320242103 25.06478826382575 25.445767828350323 24.997211883613627 25 24.811051580532144 24.65161379954314 25.316111154690564 25.221223465234154 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 443.0 1 443.0 2 461.0 3 479.0 4 479.0 5 479.0 6 915.5 7 1352.0 8 1352.0 9 1352.0 10 1613.0 11 1874.0 12 1874.0 13 1874.0 14 2350.5 15 2827.0 16 2827.0 17 2827.0 18 4762.5 19 6698.0 20 6698.0 21 6698.0 22 10517.0 23 14336.0 24 14336.0 25 14336.0 26 21046.0 27 27756.0 28 27756.0 29 27756.0 30 35302.5 31 42849.0 32 42849.0 33 42849.0 34 53077.5 35 63306.0 36 63306.0 37 63306.0 38 74999.5 39 86693.0 40 86693.0 41 86693.0 42 99404.5 43 112116.0 44 112116.0 45 112116.0 46 125127.5 47 138139.0 48 138139.0 49 138139.0 50 142464.5 51 146790.0 52 146790.0 53 146790.0 54 136946.5 55 127103.0 56 127103.0 57 127103.0 58 116166.5 59 105230.0 60 105230.0 61 105230.0 62 92148.0 63 79066.0 64 79066.0 65 79066.0 66 64417.5 67 49769.0 68 49769.0 69 49769.0 70 37633.0 71 25497.0 72 25497.0 73 25497.0 74 19473.0 75 13449.0 76 13449.0 77 13449.0 78 10663.0 79 7877.0 80 7877.0 81 7877.0 82 5434.0 83 2991.0 84 2991.0 85 2991.0 86 2209.0 87 1427.0 88 1427.0 89 1427.0 90 940.0 91 453.0 92 453.0 93 453.0 94 276.0 95 99.0 96 99.0 97 99.0 98 255.5 99 412.0 100 412.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.001038685364262236 2 1.8885188441131564E-4 3 8.498334798509204E-4 4 0.010764557411444992 5 0.033143505714185895 6 0.062132269971322845 7 0.11113933397605925 8 0.10651246280798202 9 0.11784357587266095 10 0.13323500445218317 11 0.14267759867274896 12 0.13351828227880014 13 0.12889141111072291 14 0.11557735325972515 15 0.1340848379320341 16 0.11812685369927793 17 0.12294257675176648 18 0.11142261180267622 19 0.09631446104977097 20 0.09291512713036729 21 0.09055447857522583 22 0.10566262932813109 23 0.08158401406568834 24 0.09149873799728242 25 0.08857153378890703 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1059031.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.664900794566705 #Duplication Level Percentage of deduplicated Percentage of total 1 74.8445996846672 42.41061816140726 2 15.161839574803412 17.182882707387417 3 4.849116819026179 8.2432417047415 4 1.9636294486040657 4.450754716097565 5 0.9641455505289762 2.7316605986123674 6 0.53595425765455 1.8221876904252434 7 0.33947396579171796 1.3465381015748081 8 0.2218773591651183 1.0058126836521502 9 0.1642248533128067 0.8375206518875217 >10 0.8211931074125302 8.396250423219005 >50 0.07133850248578823 2.8478732682321395 >100 0.05758493567831886 6.522199522457216 >500 0.00451974678256017 1.7456336256056662 >1k 5.0219408695113E-4 0.45682614470015154 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2328 0.21982359345477137 No Hit TATCAACGCAGAGTACTTTTTTTTT 1358 0.12823042951528332 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1130 0.10670131469239331 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8885188441131564E-4 2 0.0 0.0 0.0 0.0 1.8885188441131564E-4 3 0.0 0.0 0.0 0.0 1.8885188441131564E-4 4 0.0 0.0 0.0 0.0 1.8885188441131564E-4 5 0.0 0.0 0.0 0.0 3.777037688226313E-4 6 0.0 0.0 0.0 0.0 3.777037688226313E-4 7 0.0 0.0 0.0 0.0 3.777037688226313E-4 8 0.0 0.0 0.0 0.0 3.777037688226313E-4 9 0.0 0.0 0.0 0.0 3.777037688226313E-4 10 0.0 0.0 0.0 0.0 3.777037688226313E-4 11 0.0 0.0 0.0 9.442594220565782E-5 3.777037688226313E-4 12 0.0 0.0 0.0 9.442594220565782E-5 3.777037688226313E-4 13 0.0 0.0 0.0 9.442594220565782E-5 3.777037688226313E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 55 1.9605864E-4 13.817048 16 GGTATCA 605 0.0 13.187754 1 ACCGTGT 65 5.4462307E-5 13.154631 8 CGTTATT 95 7.390372E-8 12.998319 2 CGCCAGT 155 0.0 12.871737 18 AAGACGG 230 0.0 12.805113 5 GTATCAA 1710 0.0 12.775521 1 AATCGCT 75 1.4780559E-5 12.666226 15 GTTTTAC 60 4.0962067E-4 12.66443 1 CGCATCG 160 0.0 12.468316 13 GTCCTAA 115 5.329639E-9 12.389116 1 GTATTTA 100 1.4440411E-7 12.347819 1 GCGTTAT 100 1.4440411E-7 12.347819 1 AAATCGC 70 1.0906205E-4 12.2138605 14 CAAGACG 245 0.0 12.01999 4 GTCCTAC 130 2.6175258E-9 11.690243 1 CGGACCA 230 0.0 11.566454 9 CGCAAGA 255 0.0 11.547526 2 TCGCCAG 200 0.0 11.399065 17 GCATCGC 185 0.0 11.296904 14 >>END_MODULE