##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062311_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1059031 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.249609312664123 32.0 32.0 32.0 32.0 32.0 2 31.447017131698694 32.0 32.0 32.0 32.0 32.0 3 31.565797412918034 32.0 32.0 32.0 32.0 32.0 4 31.64556656037453 32.0 32.0 32.0 32.0 32.0 5 31.628170469041983 32.0 32.0 32.0 32.0 32.0 6 35.26306878646612 36.0 36.0 36.0 36.0 36.0 7 35.26515937682655 36.0 36.0 36.0 36.0 36.0 8 35.216109821147825 36.0 36.0 36.0 36.0 36.0 9 35.2899745144382 36.0 36.0 36.0 36.0 36.0 10 35.17632439465889 36.0 36.0 36.0 36.0 36.0 11 35.28845614528753 36.0 36.0 36.0 36.0 36.0 12 35.21544789529296 36.0 36.0 36.0 36.0 36.0 13 35.25467998576057 36.0 36.0 36.0 36.0 36.0 14 35.21317695138291 36.0 36.0 36.0 36.0 36.0 15 35.199475747168876 36.0 36.0 36.0 36.0 36.0 16 35.20541986023072 36.0 36.0 36.0 36.0 36.0 17 35.1910860022039 36.0 36.0 36.0 36.0 36.0 18 35.18366129036827 36.0 36.0 36.0 36.0 36.0 19 35.17061256941487 36.0 36.0 36.0 36.0 36.0 20 35.17275698256236 36.0 36.0 36.0 36.0 36.0 21 35.16266001656231 36.0 36.0 36.0 36.0 36.0 22 35.14935728982438 36.0 36.0 36.0 36.0 36.0 23 35.12056965282414 36.0 36.0 36.0 36.0 36.0 24 35.104471918196914 36.0 36.0 36.0 36.0 36.0 25 35.097313487518306 36.0 36.0 36.0 36.0 36.0 26 35.045657775834705 36.0 36.0 36.0 36.0 36.0 27 35.04526024261801 36.0 36.0 36.0 36.0 36.0 28 35.00938499439582 36.0 36.0 36.0 36.0 36.0 29 35.005163210519804 36.0 36.0 36.0 36.0 36.0 30 34.975040390696776 36.0 36.0 36.0 36.0 36.0 31 34.98487013128039 36.0 36.0 36.0 36.0 36.0 32 34.95635821803139 36.0 36.0 36.0 36.0 36.0 33 34.93112005219866 36.0 36.0 36.0 36.0 36.0 34 34.91864921801156 36.0 36.0 36.0 36.0 36.0 35 34.900414624312226 36.0 36.0 36.0 36.0 36.0 36 34.885231877064975 36.0 36.0 36.0 32.0 36.0 37 34.87544557241478 36.0 36.0 36.0 32.0 36.0 38 34.85410719799515 36.0 36.0 36.0 32.0 36.0 39 34.844133929979385 36.0 36.0 36.0 32.0 36.0 40 34.83089352436331 36.0 36.0 36.0 32.0 36.0 41 34.799204178159094 36.0 36.0 36.0 32.0 36.0 42 34.76927776429585 36.0 36.0 36.0 32.0 36.0 43 34.75028965157772 36.0 36.0 36.0 32.0 36.0 44 34.709503310101404 36.0 36.0 36.0 32.0 36.0 45 34.69130082122242 36.0 36.0 36.0 32.0 36.0 46 34.66629494320752 36.0 36.0 36.0 32.0 36.0 47 34.6323582595788 36.0 36.0 36.0 32.0 36.0 48 34.60981973143374 36.0 36.0 36.0 32.0 36.0 49 34.58630578330568 36.0 36.0 36.0 32.0 36.0 50 34.19286970825217 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 10.0 21 53.0 22 113.0 23 262.0 24 637.0 25 1438.0 26 2900.0 27 5425.0 28 9102.0 29 14064.0 30 20409.0 31 29427.0 32 42897.0 33 71379.0 34 162983.0 35 697932.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.313777719843614 17.748351001678518 11.806384029818462 26.131487248659408 2 16.37752105323792 19.749816333044375 37.269283141734235 26.60337947198347 3 19.068069086057296 23.2571029822658 28.158111171858696 29.516716759818213 4 12.661952294125477 15.750247159903724 35.38763265664556 36.20016788932524 5 14.412986966387198 36.74594983527395 33.22745037680672 15.613612821532136 6 34.82712026371277 34.98518929096504 16.37355280440327 13.814137640918917 7 30.77435882424594 30.060687553055576 19.933977381209804 19.23097624148868 8 28.067639190920758 33.13831228736458 18.89736938767609 19.89667913403857 9 27.1805074638986 14.333858026818854 18.45573925598023 40.029895253302314 10 16.222124228892692 26.66924135221982 31.112368027693293 25.9962663911942 11 37.339511307978704 21.390497539732074 21.817680502270473 19.452310650018745 12 24.705131388977282 23.62149927622515 28.423436141151676 23.249933193645887 13 29.573827395043207 19.46845748613591 25.033167112199738 25.924548006621144 14 23.618949775785598 19.285271158256933 25.168007357669413 31.92777170828805 15 25.279618821356504 26.932450513724337 22.159219135228337 25.628711529690822 16 25.67505807255765 26.044172914581402 23.517875016524712 24.762893996336235 17 24.047926831225904 25.989796332685255 25.053090986005135 24.90918585008371 18 24.763604430469393 25.13450988168418 25.934392793405287 24.16749289444114 19 25.416725289439118 24.950166709000964 25.54221736663044 24.09089063492948 20 25.804700159013738 24.228160161959835 25.137484561314714 24.829655117711713 21 26.54957838776994 24.19572627782027 24.858785870088663 24.395909464321125 22 25.740511845262322 24.37936188836776 25.25544578015186 24.62468048621806 23 24.41026222108911 24.439723142876026 25.719290293948237 25.430724342086624 24 24.693157975248674 24.69032515150886 25.572277609172307 25.04423926407016 25 24.98784265994102 24.32110108202687 25.547033089682923 25.14402316834918 26 24.549350063171254 25.21788889035774 25.625716460219106 24.607044586251895 27 25.103325977524655 24.823446427711474 25.250725430040973 24.822502164722902 28 24.73135438935767 24.66506643903397 25.697439887593767 24.906139284014593 29 24.470904841717616 24.98297962748755 25.671631925591935 24.874483605202897 30 24.734659344145886 24.963362215490605 25.759856319451263 24.542122120912243 31 25.04105191095583 24.838223837964165 25.062770000708202 25.057954250371807 32 24.92691383764674 24.827293810149722 25.02861124960341 25.21718110260013 33 24.57354803315112 24.58478474149433 25.532067582662986 25.30959964269156 34 25.10948781045153 24.72299914449369 25.640827102741966 24.526685942312813 35 25.570380442480385 24.47343323607452 25.640916687912522 24.315269633532573 36 24.621564430125275 24.974811879916643 25.321543939695818 25.08207975026227 37 25.362978463026053 24.859775489699874 25.242394826895907 24.53485122037816 38 24.67189345732089 24.715234964793286 25.48754474609336 25.12532683179246 39 25.230778528154225 24.765161129492817 25.080451434528396 24.923608907824562 40 25.500221901173713 24.79013814528389 25.193526151289387 24.516113802253006 41 24.520099223716997 25.30790229844356 25.54935171257227 24.622646765267167 42 25.52911814115294 25.06773033270726 25.10597471715681 24.297176808982993 43 25.12582791462777 24.43875556428508 25.414972435896228 25.02044408519093 44 24.677849775916023 25.074930735104978 25.23140235207908 25.015817136899916 45 24.911332114582706 25.22351105940654 25.085079621683686 24.78007720432707 46 24.70517247728773 24.924811781580704 25.15531029481336 25.21470544631821 47 24.717450239231287 24.98940054786656 25.416966866443126 24.87618234645903 48 25.282296216975737 25.395800165062315 24.706655561787887 24.615248056174067 49 24.890580219925496 25.464048461040896 24.74006015136993 24.905311167663683 50 25.048866209511868 25.38804963862612 24.859067018944035 24.70401713291798 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 187.0 1 116.5 2 46.0 3 112.0 4 178.0 5 208.0 6 238.0 7 194.0 8 150.0 9 220.0 10 290.0 11 503.0 12 716.0 13 1175.0 14 1634.0 15 2216.0 16 2798.0 17 2757.5 18 2717.0 19 2624.0 20 2531.0 21 2830.5 22 3130.0 23 3704.5 24 4279.0 25 5128.5 26 5978.0 27 7553.0 28 9128.0 29 10896.0 30 12664.0 31 14714.5 32 16765.0 33 19187.5 34 21610.0 35 24554.5 36 27499.0 37 32230.0 38 36961.0 39 41199.5 40 45438.0 41 49925.5 42 54413.0 43 57443.0 44 60473.0 45 65338.0 46 70203.0 47 74458.5 48 78714.0 49 81853.5 50 84993.0 51 82569.0 52 80145.0 53 79198.0 54 78251.0 55 78303.0 56 78355.0 57 74855.0 58 71355.0 59 65031.0 60 58707.0 61 51608.5 62 44510.0 63 38409.0 64 32308.0 65 27210.5 66 22113.0 67 19255.0 68 16397.0 69 14510.0 70 12623.0 71 10003.0 72 7383.0 73 6414.5 74 5446.0 75 4050.0 76 2654.0 77 2286.5 78 1919.0 79 1655.0 80 1391.0 81 1111.0 82 831.0 83 658.5 84 486.0 85 368.5 86 251.0 87 172.5 88 94.0 89 65.0 90 36.0 91 26.0 92 16.0 93 15.5 94 15.0 95 9.0 96 3.0 97 4.5 98 6.0 99 4.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0338044873096255 2 0.004626871168077233 3 3.777037688226313E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 1.8885188441131564E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.001038685364262236 17 0.0 18 9.442594220565782E-5 19 0.0 20 2.8327782661697346E-4 21 9.442594220565782E-5 22 0.0 23 9.442594220565782E-5 24 0.0016052410174961828 25 0.0 26 4.7212971102828904E-4 27 3.777037688226313E-4 28 0.0014163891330848672 29 5.665556532339469E-4 30 0.0014163891330848672 31 5.665556532339469E-4 32 6.609815954396047E-4 33 1.8885188441131564E-4 34 8.498334798509204E-4 35 9.442594220565782E-5 36 0.0 37 0.0014163891330848672 38 0.0 39 6.609815954396047E-4 40 9.442594220565782E-5 41 9.442594220565781E-4 42 0.004910148994694206 43 0.0042491673992546015 44 0.0050045749368998645 45 0.00217179667073013 46 0.002077370728524472 47 0.0013219631908792094 48 0.003493759861609339 49 0.0033993339194036817 50 0.0016052410174961828 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1059031.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.98090002297885 #Duplication Level Percentage of deduplicated Percentage of total 1 74.54700290573945 43.223023224903926 2 15.452821969356773 17.919370513563326 3 4.939254958859137 8.591473438728425 4 1.9839589167385652 4.601268944044647 5 0.9671253586032482 2.8037399363431255 6 0.5287149639173522 1.8393221678126923 7 0.3271463314925653 1.327776711740831 8 0.20541556239333159 0.9528143349033389 9 0.16502566552384984 0.8611502952567497 >10 0.7674627409593013 7.996611533087031 >50 0.062966565125221 2.5769516906071983 >100 0.04900652698065397 5.596120436115142 >500 0.003933632938197397 1.6078377942319932 >1k 1.6390137242489156E-4 0.10253897866164198 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1079 0.10188559163990477 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 9.442594220565782E-5 0.0 2 0.0 0.0 0.0 9.442594220565782E-5 0.0 3 0.0 0.0 0.0 9.442594220565782E-5 0.0 4 0.0 0.0 0.0 9.442594220565782E-5 0.0 5 0.0 0.0 0.0 9.442594220565782E-5 0.0 6 0.0 0.0 0.0 9.442594220565782E-5 1.8885188441131564E-4 7 0.0 0.0 0.0 9.442594220565782E-5 1.8885188441131564E-4 8 0.0 0.0 0.0 9.442594220565782E-5 1.8885188441131564E-4 9 0.0 0.0 0.0 9.442594220565782E-5 1.8885188441131564E-4 10 0.0 0.0 0.0 9.442594220565782E-5 1.8885188441131564E-4 11 0.0 0.0 0.0 1.8885188441131564E-4 1.8885188441131564E-4 12 0.0 0.0 0.0 1.8885188441131564E-4 3.777037688226313E-4 13 0.0 0.0 0.0 1.8885188441131564E-4 3.777037688226313E-4 14 0.0 0.0 0.0 1.8885188441131564E-4 3.777037688226313E-4 15 0.0 0.0 0.0 1.8885188441131564E-4 4.721297110282891E-4 16 0.0 0.0 0.0 1.8885188441131564E-4 6.609815954396047E-4 17 0.0 0.0 0.0 1.8885188441131564E-4 6.609815954396047E-4 18 0.0 0.0 0.0 1.8885188441131564E-4 7.554075376452626E-4 19 0.0 0.0 0.0 1.8885188441131564E-4 7.554075376452626E-4 20 0.0 0.0 0.0 2.8327782661697346E-4 7.554075376452626E-4 21 0.0 0.0 0.0 5.665556532339469E-4 7.554075376452626E-4 22 0.0 0.0 0.0 7.554075376452626E-4 7.554075376452626E-4 23 0.0 0.0 0.0 0.001038685364262236 7.554075376452626E-4 24 0.0 0.0 0.0 0.0016996669597018406 7.554075376452626E-4 25 0.0 0.0 0.0 0.0021717966707301296 7.554075376452626E-4 26 0.0 0.0 0.0 0.0032104820349923655 7.554075376452626E-4 27 0.0 0.0 0.0 0.003493759861609339 7.554075376452626E-4 28 0.0 0.0 0.0 0.0042491673992546015 7.554075376452626E-4 29 0.0 0.0 0.0 0.00651539001219039 7.554075376452626E-4 30 0.0 0.0 0.0 0.010858983353650648 7.554075376452626E-4 31 0.0 0.0 0.0 0.02067928134303906 7.554075376452626E-4 32 0.0 0.0 0.0 0.032954653829774576 7.554075376452626E-4 33 0.0 0.0 0.0 0.042586099934751674 7.554075376452626E-4 34 0.0 0.0 0.0 0.055050324305898506 7.554075376452626E-4 35 0.0 0.0 0.0 0.06836438215689626 7.554075376452626E-4 36 0.0 0.0 0.0 0.08356695885200717 7.554075376452626E-4 37 0.0 0.0 0.0 0.11019507455400267 8.498334798509203E-4 38 0.0 0.0 0.0 0.1435274321525999 8.498334798509203E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 870 0.0 24.287956 1 GTATCAA 1745 0.0 24.092224 1 CGCAATA 185 0.0 20.217691 36 TACGAAT 210 0.0 19.906214 41 GTAGGGG 100 1.1239063E-6 19.798641 3 TAGACCG 60 0.007414448 18.332075 5 TTAACGG 60 0.007414448 18.332075 3 TATTAGG 145 6.2991603E-9 18.208225 2 ATACGAA 230 0.0 18.175238 40 CGACGGT 235 0.0 17.786013 7 TACGACG 260 0.0 17.76801 5 TAGGACG 100 2.4840076E-5 17.598791 4 TAACGCC 240 0.0 17.41547 4 TTAGGAC 165 1.6607373E-9 17.332144 3 CAATACG 220 1.8189894E-12 17.00124 38 GGCGTTA 285 0.0 16.983696 42 CTAGCGG 235 0.0 16.850702 29 ATAACGC 250 0.0 16.718851 3 TATCAAC 2575 0.0 16.575966 2 ATCGTTT 240 0.0 16.499645 29 >>END_MODULE