##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062310_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1295149 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25824827876947 32.0 32.0 32.0 32.0 32.0 2 31.440401837935248 32.0 32.0 32.0 32.0 32.0 3 31.559791190048404 32.0 32.0 32.0 32.0 32.0 4 31.638312657462578 32.0 32.0 32.0 32.0 32.0 5 31.61612061623798 32.0 32.0 32.0 32.0 32.0 6 35.2526473787958 36.0 36.0 36.0 36.0 36.0 7 35.25045844146118 36.0 36.0 36.0 36.0 36.0 8 35.20372096183528 36.0 36.0 36.0 36.0 36.0 9 35.28585050831989 36.0 36.0 36.0 36.0 36.0 10 35.16873888641384 36.0 36.0 36.0 36.0 36.0 11 35.29097424311797 36.0 36.0 36.0 36.0 36.0 12 35.20948941009876 36.0 36.0 36.0 36.0 36.0 13 35.248338994200665 36.0 36.0 36.0 36.0 36.0 14 35.209874693954134 36.0 36.0 36.0 36.0 36.0 15 35.18482043378793 36.0 36.0 36.0 36.0 36.0 16 35.202484810627965 36.0 36.0 36.0 36.0 36.0 17 35.18332099241091 36.0 36.0 36.0 36.0 36.0 18 35.175356657805395 36.0 36.0 36.0 36.0 36.0 19 35.17036263781233 36.0 36.0 36.0 36.0 36.0 20 35.1674641296098 36.0 36.0 36.0 36.0 36.0 21 35.15957700619774 36.0 36.0 36.0 36.0 36.0 22 35.13968817487409 36.0 36.0 36.0 36.0 36.0 23 35.11005065826403 36.0 36.0 36.0 36.0 36.0 24 35.09480762445093 36.0 36.0 36.0 36.0 36.0 25 35.080151395708135 36.0 36.0 36.0 36.0 36.0 26 35.04271168799883 36.0 36.0 36.0 36.0 36.0 27 35.025287437970455 36.0 36.0 36.0 36.0 36.0 28 35.004633443719605 36.0 36.0 36.0 36.0 36.0 29 34.98388139125305 36.0 36.0 36.0 36.0 36.0 30 34.96376478690869 36.0 36.0 36.0 36.0 36.0 31 34.96672043139438 36.0 36.0 36.0 36.0 36.0 32 34.9364243033041 36.0 36.0 36.0 36.0 36.0 33 34.92497465542575 36.0 36.0 36.0 32.0 36.0 34 34.90202053972168 36.0 36.0 36.0 32.0 36.0 35 34.891943706863074 36.0 36.0 36.0 32.0 36.0 36 34.87251891481212 36.0 36.0 36.0 32.0 36.0 37 34.860091773224546 36.0 36.0 36.0 32.0 36.0 38 34.84223591262472 36.0 36.0 36.0 32.0 36.0 39 34.82888300882755 36.0 36.0 36.0 32.0 36.0 40 34.81796457396022 36.0 36.0 36.0 32.0 36.0 41 34.785993735083764 36.0 36.0 36.0 32.0 36.0 42 34.757725945045706 36.0 36.0 36.0 32.0 36.0 43 34.75359900675521 36.0 36.0 36.0 32.0 36.0 44 34.704382275707275 36.0 36.0 36.0 32.0 36.0 45 34.69258981012995 36.0 36.0 36.0 32.0 36.0 46 34.66822118536169 36.0 36.0 36.0 32.0 36.0 47 34.65036223631412 36.0 36.0 36.0 32.0 36.0 48 34.62921177408931 36.0 36.0 36.0 32.0 36.0 49 34.60990511516435 36.0 36.0 36.0 32.0 36.0 50 34.187344467702175 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 8.0 21 25.0 22 97.0 23 241.0 24 639.0 25 1469.0 26 3035.0 27 6030.0 28 10098.0 29 16400.0 30 24616.0 31 36506.0 32 55441.0 33 93524.0 34 210829.0 35 836187.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.796007738915854 17.826615846241182 11.982266915362366 26.395109499480597 2 16.23993989611541 19.636689622582505 37.024116452048546 27.099254029253544 3 18.75138015754257 22.832168210126767 28.445606736558616 29.970844895772046 4 12.71730125259719 15.583071909100807 35.08221833935709 36.61740849894491 5 14.68865744404698 36.44623128304156 33.17162735716122 15.693483915750233 6 35.45510348262164 34.673646580112646 16.12630246034228 13.744947476923434 7 31.188149008338033 29.968598207619358 19.818723559991938 19.024529224050667 8 28.32708823463555 33.34550696483571 18.71885010913802 19.60855469139072 9 27.097886034734227 14.239828776457381 18.62920791352964 40.03307727527875 10 16.541597208656626 26.611264976099235 30.782451721696457 26.064686093547685 11 37.35809547781761 21.17725450894067 21.786605247735974 19.678044765505746 12 24.312878286590962 23.57188246294442 28.47610583801555 23.63913341244907 13 29.63311557203071 19.207519752553566 25.084372531654658 26.074992143761065 14 23.474133092022615 19.459614299204183 24.93921548794772 32.12703712082548 15 25.263965767645267 27.11355990700684 21.841270772706462 25.781203552641436 16 25.921173122329442 25.782037799716168 23.46607553457459 24.830713543379797 17 24.06294565335726 26.14324683878071 24.893815306192568 24.89999220166946 18 24.924255760731594 24.99922788746923 25.914258447683196 24.16225790411598 19 25.688472909294607 24.95620195050917 25.247596994631504 24.107728145564717 20 25.793731681630206 24.39342839582812 24.927266999601592 24.88557292294008 21 26.600337104070654 24.09908049189707 24.51887775074528 24.781704653286994 22 25.915551029263817 24.30237756428025 25.05341084307674 24.728660563379194 23 24.584661687574172 24.290178195713388 25.521310675451243 25.6038494412612 24 24.81287650544268 24.721302969422467 25.44794592683074 25.01787459830411 25 25.041887169477416 24.383660220546563 25.413428293026424 25.161024316949593 26 24.55533902021706 25.192024979461742 25.727872730754264 24.524763269566936 27 25.266495051523147 24.753579905277086 25.129136020186145 24.850789023013622 28 24.721147684016277 24.618146440897824 25.53952112915306 25.12118474593284 29 24.613093215889506 24.81268492152224 25.529670831969263 25.04455103061899 30 24.68553471259753 24.89933481837801 25.60304524238786 24.812085226636604 31 25.232155472939322 24.58991078219041 24.96052565542854 25.217408089441722 32 25.135255543604906 24.651833275295896 24.845016874610565 25.367894306488637 33 24.706249334051915 24.520401560905103 25.271127733861665 25.502221371181317 34 25.262250045941048 24.52688439378661 25.47720783422307 24.73365772604927 35 25.607537683010257 24.513066480535787 25.48222362575339 24.397172210700568 36 24.591937267207353 24.94409888012453 25.21804525211096 25.24591860055716 37 25.574769443638 24.710839391936553 25.04053653384067 24.673854630584778 38 24.847334167728963 24.612534928413645 25.405571096452995 25.1345598074044 39 25.423622810851043 24.486888655880687 24.86545835270064 25.22403018056763 40 25.63620093132142 24.618402979116688 25.202274024069816 24.543122065492078 41 24.64606033652064 25.02308637857337 25.559477923553974 24.771375361352014 42 25.639091300080846 24.981680682521016 25.14159346017739 24.237634557220744 43 25.165277578307055 24.340240940039873 25.255772940033694 25.23870854161937 44 24.711989572941537 24.92564234818839 25.20994647484503 25.152421604025044 45 24.875049898966655 25.112402972086688 25.047775606373783 24.964771522572864 46 24.804399307241916 24.767028050834174 25.0914785041923 25.337094137731608 47 25.02312502026817 24.790176151656894 25.38826098303342 24.79843784504152 48 25.58769819974596 25.180701029654195 24.58159440041078 24.65000637018906 49 25.00291483058078 25.207068792318125 24.712358341164126 25.077658035936967 50 25.07057217510547 25.41131069670334 24.724892057001316 24.793225071189877 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 276.0 1 166.5 2 57.0 3 168.5 4 280.0 5 283.5 6 287.0 7 235.0 8 183.0 9 244.0 10 305.0 11 490.5 12 676.0 13 1281.0 14 1886.0 15 2333.5 16 2781.0 17 2791.5 18 2802.0 19 2669.0 20 2536.0 21 3024.5 22 3513.0 23 4291.5 24 5070.0 25 6384.0 26 7698.0 27 9759.0 28 11820.0 29 13635.5 30 15451.0 31 17531.0 32 19611.0 33 22885.0 34 26159.0 35 30099.0 36 34039.0 37 40028.0 38 46017.0 39 50937.5 40 55858.0 41 60441.5 42 65025.0 43 67846.0 44 70667.0 45 76947.5 46 83228.0 47 88425.5 48 93623.0 49 97686.0 50 101749.0 51 99250.5 52 96752.0 53 96351.5 54 95951.0 55 96207.0 56 96463.0 57 93279.5 58 90096.0 59 82658.0 60 75220.0 61 65989.5 62 56759.0 63 49230.5 64 41702.0 65 35094.5 66 28487.0 67 24529.0 68 20571.0 69 18411.0 70 16251.0 71 12730.5 72 9210.0 73 8014.5 74 6819.0 75 4967.5 76 3116.0 77 2772.5 78 2429.0 79 2018.0 80 1607.0 81 1283.0 82 959.0 83 774.5 84 590.0 85 457.0 86 324.0 87 223.0 88 122.0 89 88.0 90 54.0 91 38.0 92 22.0 93 17.5 94 13.0 95 15.5 96 18.0 97 15.0 98 12.0 99 8.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03042121022368855 2 0.00447824922074603 3 5.404783542279692E-4 4 0.0 5 0.0 6 3.0884477384455377E-4 7 0.0 8 0.0 9 0.0 10 1.5442238692227689E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.404783542279692E-4 17 0.0 18 7.721119346113844E-5 19 0.0 20 7.721119346113844E-5 21 0.0 22 0.0 23 0.0 24 0.0011581679019170767 25 2.3163358038341534E-4 26 3.860559673056923E-4 27 2.3163358038341534E-4 28 0.0014670126757616304 29 3.860559673056923E-4 30 0.0010809567084559383 31 3.0884477384455377E-4 32 6.176895476891075E-4 33 2.3163358038341534E-4 34 8.49323128072523E-4 35 2.3163358038341534E-4 36 3.860559673056923E-4 37 0.0016214350626839074 38 0.0 39 8.49323128072523E-4 40 0.0 41 0.0010037455149947997 42 0.005250361155357415 43 0.004246615640362614 44 0.004401038027284892 45 0.00247075819075643 46 0.002779602964600984 47 0.0011581679019170767 48 0.004169404446901477 49 0.0037061372861346455 50 0.0016214350626839074 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1295149.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.90991357619435 #Duplication Level Percentage of deduplicated Percentage of total 1 79.29746599597235 46.71406868633941 2 12.90171816673014 15.200782043729783 3 3.4764789233902875 6.143972187791491 4 1.4176907297857333 3.340641534777978 5 0.7327057005040084 2.1581814746738037 6 0.4410097309944877 1.5587907083487593 7 0.29918739439193803 1.233757248270109 8 0.22620209479221268 1.0660436683970695 9 0.16395732327830218 0.8692840570058046 >10 0.9136513663753868 9.770550960497495 >50 0.06838515687719773 2.815896300671536 >100 0.05548494879046334 6.440013123070146 >500 0.004876333051107922 1.8950130986326665 >1k 0.0011861350664857107 0.7930049077939223 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1404 0.10840451561943838 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 3.0884477384455377E-4 6 0.0 0.0 0.0 0.0 3.8605596730569225E-4 7 0.0 0.0 0.0 0.0 3.8605596730569225E-4 8 0.0 0.0 0.0 0.0 3.8605596730569225E-4 9 0.0 0.0 0.0 0.0 4.632671607668307E-4 10 0.0 0.0 0.0 0.0 4.632671607668307E-4 11 0.0 0.0 0.0 0.0 4.632671607668307E-4 12 0.0 0.0 0.0 0.0 6.94900741150246E-4 13 0.0 0.0 0.0 0.0 8.493231280725229E-4 14 0.0 0.0 0.0 0.0 8.493231280725229E-4 15 0.0 0.0 0.0 0.0 8.493231280725229E-4 16 0.0 0.0 0.0 0.0 8.493231280725229E-4 17 0.0 0.0 0.0 0.0 0.0010037455149947997 18 0.0 0.0 0.0 0.0 0.001389801482300492 19 0.0 0.0 0.0 7.721119346113844E-5 0.001389801482300492 20 0.0 0.0 0.0 2.3163358038341534E-4 0.001544223869222769 21 0.0 0.0 0.0 3.8605596730569225E-4 0.001544223869222769 22 0.0 0.0 0.0 5.404783542279692E-4 0.0016214350626839074 23 0.0 0.0 0.0 8.493231280725229E-4 0.0016214350626839074 24 0.0 7.721119346113844E-5 0.0 0.0014670126757616304 0.0016214350626839074 25 0.0 7.721119346113844E-5 0.0 0.001930279836528461 0.0016214350626839074 26 0.0 7.721119346113844E-5 0.0 0.0020847022234507383 0.0017758574496061844 27 0.0 7.721119346113844E-5 0.0 0.00247075819075643 0.0017758574496061844 28 0.0 7.721119346113844E-5 0.0 0.0037061372861346455 0.0017758574496061844 29 0.0 7.721119346113844E-5 0.0 0.006022473089968799 0.0017758574496061844 30 0.0 7.721119346113844E-5 0.0 0.010346299923792553 0.0017758574496061844 31 0.0 7.721119346113844E-5 0.0 0.019225587171823474 0.001930279836528461 32 0.0 7.721119346113844E-5 0.0 0.028954197547926917 0.0020074910299895995 33 0.0 7.721119346113844E-5 0.0 0.03914607508479719 0.0020074910299895995 34 0.0 7.721119346113844E-5 0.0 0.04872026307397836 0.0021619134169118767 35 0.0 7.721119346113844E-5 0.0 0.060456364480071405 0.0021619134169118767 36 0.0 7.721119346113844E-5 0.0 0.07844657255651666 0.0021619134169118767 37 0.0 7.721119346113844E-5 0.0 0.10608817981560423 0.0021619134169118767 38 0.0 7.721119346113844E-5 0.0 0.13867130345620465 0.0021619134169118767 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 820 0.0 27.91128 1 GTATCAA 1750 0.0 25.150824 1 AATTCCG 295 0.0 19.39223 42 ATTCCGA 315 0.0 18.861662 43 TGTACGC 60 0.0074120443 18.333477 2 CGCAATA 325 0.0 18.276361 36 CATATAG 230 0.0 18.174057 2 TCTAGCG 330 0.0 18.000143 28 GTCCTAA 200 3.6379788E-12 17.605577 1 ATACGAA 340 0.0 17.472075 40 TAGCGGC 340 0.0 17.47005 30 GCATATA 265 0.0 17.439486 1 TCAACGC 2585 0.0 17.105198 4 ATCAACG 2595 0.0 17.039282 3 GTCCTAC 340 0.0 16.82886 1 CAACGCA 2605 0.0 16.72053 5 CGTCGTA 290 0.0 16.688498 10 AACGCAG 2615 0.0 16.572464 6 CTAGCGG 360 0.0 16.500132 29 TATCAAC 2715 0.0 16.449486 2 >>END_MODULE