##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062309_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4780459 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.333415473284052 32.0 32.0 32.0 32.0 32.0 2 30.989325083637365 32.0 32.0 32.0 32.0 32.0 3 31.01142630864526 32.0 32.0 32.0 32.0 32.0 4 31.015492445390706 32.0 32.0 32.0 32.0 32.0 5 30.976910585364294 32.0 32.0 32.0 32.0 32.0 6 34.59669521274003 36.0 36.0 36.0 32.0 36.0 7 34.56042463704845 36.0 36.0 36.0 32.0 36.0 8 34.53594602526661 36.0 36.0 36.0 32.0 36.0 9 34.63326973414059 36.0 36.0 36.0 32.0 36.0 10 34.41218552444441 36.0 36.0 36.0 32.0 36.0 11 34.595540721089755 36.0 36.0 36.0 32.0 36.0 12 34.49044390925641 36.0 36.0 36.0 32.0 36.0 13 34.5280480389017 36.0 36.0 36.0 32.0 36.0 14 34.47160220388879 36.0 36.0 36.0 32.0 36.0 15 34.435023498789555 36.0 36.0 36.0 32.0 36.0 16 34.435688916064336 36.0 36.0 36.0 32.0 36.0 17 34.39592808975038 36.0 36.0 36.0 32.0 36.0 18 34.387366777960025 36.0 36.0 36.0 32.0 36.0 19 34.38995502314736 36.0 36.0 36.0 32.0 36.0 20 34.36621859951105 36.0 36.0 36.0 32.0 36.0 21 34.35644171406972 36.0 36.0 36.0 32.0 36.0 22 34.32887469592355 36.0 36.0 36.0 32.0 36.0 23 34.299554917216106 36.0 36.0 36.0 32.0 36.0 24 34.27682467311193 36.0 36.0 36.0 32.0 36.0 25 33.93851301726466 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 65.0 5 375.0 6 974.0 7 217.0 8 841.0 9 639.0 10 360.0 11 85.0 12 179.0 13 204.0 14 540.0 15 875.0 16 1404.0 17 1862.0 18 2649.0 19 3548.0 20 5073.0 21 6843.0 22 10228.0 23 14942.0 24 21106.0 25 30310.0 26 43077.0 27 57019.0 28 77719.0 29 105756.0 30 142581.0 31 198657.0 32 289259.0 33 424671.0 34 981654.0 35 2356744.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.57624856942217 16.297971032197857 11.563587314981913 26.56219308339806 2 16.81109518978339 18.45447604305034 37.447416038239076 27.287012728927195 3 19.836261660034072 21.25433433631103 27.931450546728833 30.977953456926066 4 13.334970725684201 14.65360155884215 34.559759730106414 37.45166798536724 5 15.362922100926518 35.469190056295815 33.63833614815909 15.529551694618574 6 36.09471406626083 33.8727979113557 15.811249215847859 14.221238806535617 7 31.422927756661956 29.843600048832453 19.275834868421466 19.45763732608413 8 28.19116421693607 33.75742651698212 18.338876804682105 19.7125324613997 9 26.918861727355146 14.791630059924406 17.94012753073448 40.34938068198596 10 15.590832418863924 27.31414522018587 31.96423002024854 25.130792340701664 11 37.27947440645228 21.115972985490416 21.63812698227165 19.966425625785654 12 24.347116117514805 23.052564795116123 28.855518604946838 23.74480048242223 13 29.761321299282095 19.657020324007863 24.620438115201495 25.961220261508544 14 23.249357268333874 18.875829017041497 25.113216271980416 32.76159744264421 15 25.09325075656274 26.894611564099215 22.013985937819424 25.998151741518623 16 25.59570246029959 26.04219002790678 23.20290272418361 25.15920478761002 17 24.24459926883698 25.77650204153869 25.03107599927533 24.947822690349003 18 24.454360446488145 25.76422624958588 25.280144043564885 24.501269260361088 19 25.317764492456234 25.20040352907872 25.15331257338986 24.328519405075184 20 25.452083957970768 24.881556180518682 25.10912660193329 24.557233259577263 21 25.482667115571683 24.511323754738733 25.128065650684057 24.877943479005523 22 25.408476339489134 24.410560287062104 25.03834111742475 25.142622256024016 23 24.950979181173324 24.643350775519192 24.893845798906405 25.511824244401076 24 24.66258960917742 24.793112956713944 25.228839839226392 25.315457594882247 25 24.888992177947507 24.657010535483977 25.249422139590976 25.204575146977536 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 258.0 1 258.0 2 677.0 3 1096.0 4 1096.0 5 1096.0 6 2324.5 7 3553.0 8 3553.0 9 3553.0 10 4704.0 11 5855.0 12 5855.0 13 5855.0 14 8229.5 15 10604.0 16 10604.0 17 10604.0 18 18209.0 19 25814.0 20 25814.0 21 25814.0 22 39916.5 23 54019.0 24 54019.0 25 54019.0 26 78581.0 27 103143.0 28 103143.0 29 103143.0 30 137768.0 31 172393.0 32 172393.0 33 172393.0 34 217937.5 35 263482.0 36 263482.0 37 263482.0 38 323237.0 39 382992.0 40 382992.0 41 382992.0 42 446826.0 43 510660.0 44 510660.0 45 510660.0 46 565856.5 47 621053.0 48 621053.0 49 621053.0 50 651659.5 51 682266.0 52 682266.0 53 682266.0 54 656114.0 55 629962.0 56 629962.0 57 629962.0 58 572123.5 59 514285.0 60 514285.0 61 514285.0 62 443051.0 63 371817.0 64 371817.0 65 371817.0 66 300814.0 67 229811.0 68 229811.0 69 229811.0 70 172325.0 71 114839.0 72 114839.0 73 114839.0 74 81415.5 75 47992.0 76 47992.0 77 47992.0 78 34435.5 79 20879.0 80 20879.0 81 20879.0 82 14646.5 83 8414.0 84 8414.0 85 8414.0 86 5435.0 87 2456.0 88 2456.0 89 2456.0 90 1570.0 91 684.0 92 684.0 93 684.0 94 493.0 95 302.0 96 302.0 97 302.0 98 1066.0 99 1830.0 100 1830.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0010040876827936396 2 1.8826644052380743E-4 3 5.647993215714223E-4 4 0.010480165189158614 5 0.03338591545288852 6 0.06288099113495169 7 0.10346286831452796 8 0.10819044782101467 9 0.11735274792650664 10 0.1315354864459668 11 0.13764368651629477 12 0.1300711919085594 13 0.1256573898029457 14 0.1156165129750093 15 0.1304268062962155 16 0.11785479176790346 17 0.12287523018187166 18 0.1095501498914644 19 0.09612047713409946 20 0.09110003872013127 21 0.09189494146900958 22 0.10264704707225812 23 0.0819377386146393 24 0.08999135857037996 25 0.08825512361888262 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 4780459.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.950949297110853 #Duplication Level Percentage of deduplicated Percentage of total 1 56.40617854304105 17.458247721294455 2 15.048087340415153 9.3150517658337 3 8.14788005995257 7.565538678435975 4 5.012454270791356 6.205608719574001 5 3.3456170206157063 5.177501138631389 6 2.308258115190075 4.286566793273561 7 1.7391777107408575 3.768044080066393 8 1.3383830946076263 3.313938184104877 9 0.9923549307568774 2.764289443193466 >10 5.307167920768528 28.322426904434323 >50 0.2465301408607307 5.225809685309496 >100 0.10485955591359028 5.461067605535804 >500 0.002102004581701373 0.4276896612979518 >1k 8.8148520957491E-4 0.5483423874122142 >5k 6.780655458267935E-5 0.15987723160234393 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 7618 0.15935708265670723 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4642945374073913E-4 2 0.0 0.0 0.0 0.0 1.4642945374073913E-4 3 0.0 0.0 0.0 0.0 1.4642945374073913E-4 4 0.0 0.0 0.0 0.0 1.6734794713227328E-4 5 0.0 0.0 0.0 0.0 1.6734794713227328E-4 6 0.0 0.0 0.0 0.0 2.3010342730687576E-4 7 0.0 0.0 0.0 0.0 2.3010342730687576E-4 8 0.0 0.0 0.0 2.091849339153416E-5 3.137774008730124E-4 9 0.0 0.0 0.0 2.091849339153416E-5 3.3469589426454656E-4 10 0.0 0.0 0.0 2.091849339153416E-5 3.9745137443914907E-4 11 0.0 0.0 0.0 2.091849339153416E-5 3.9745137443914907E-4 12 0.0 0.0 0.0 2.091849339153416E-5 9.20413709227503E-4 13 0.0 0.0 0.0 2.091849339153416E-5 0.0010250061761851738 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAC 40 0.005284681 14.248594 3 GTATCAA 4165 0.0 13.291673 1 GGTATCA 1400 0.0 13.226127 1 CGTTCGG 60 0.0058729188 11.084794 10 CCGTGCG 140 8.347342E-9 10.858802 9 TACACCG 255 0.0 10.804893 5 TTACGCA 80 3.7720858E-4 10.688013 4 AGTATCG 170 1.382432E-10 10.619158 8 TATACCG 120 1.5239566E-6 10.292592 5 ACCGTGC 325 0.0 9.939876 8 GTCCTAG 630 0.0 9.646406 1 GTATAAA 565 0.0 9.579713 1 TAACCGT 130 4.237023E-6 9.501153 6 AATCGGT 170 1.6711056E-8 9.498863 19 TATCAAC 5805 0.0 9.473624 2 GTACTAG 355 0.0 9.361938 1 CTAATAC 305 0.0 9.34334 3 ATCAACG 5825 0.0 9.327834 3 GTCTTAT 520 0.0 9.313071 1 CTTATAC 360 0.0 9.235199 3 >>END_MODULE