##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062308_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2393328 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24227602735605 32.0 32.0 32.0 32.0 32.0 2 31.36768173856655 32.0 32.0 32.0 32.0 32.0 3 31.521701580393493 32.0 32.0 32.0 32.0 32.0 4 31.61024899219831 32.0 32.0 32.0 32.0 32.0 5 31.57593317756697 32.0 32.0 32.0 32.0 32.0 6 35.20631355167365 36.0 36.0 36.0 36.0 36.0 7 35.21134712835015 36.0 36.0 36.0 36.0 36.0 8 35.15782082522747 36.0 36.0 36.0 36.0 36.0 9 35.26293136586377 36.0 36.0 36.0 36.0 36.0 10 35.12125124512812 36.0 36.0 36.0 36.0 36.0 11 35.253753768810626 36.0 36.0 36.0 36.0 36.0 12 35.17487699136934 36.0 36.0 36.0 36.0 36.0 13 35.210386541251346 36.0 36.0 36.0 36.0 36.0 14 35.174503452932484 36.0 36.0 36.0 36.0 36.0 15 35.148110079353934 36.0 36.0 36.0 36.0 36.0 16 35.167067363938415 36.0 36.0 36.0 36.0 36.0 17 35.145685004311986 36.0 36.0 36.0 36.0 36.0 18 35.14310449716879 36.0 36.0 36.0 36.0 36.0 19 35.13568553913212 36.0 36.0 36.0 36.0 36.0 20 35.137435403755774 36.0 36.0 36.0 36.0 36.0 21 35.12617576863681 36.0 36.0 36.0 36.0 36.0 22 35.11123464899086 36.0 36.0 36.0 36.0 36.0 23 35.07854376834266 36.0 36.0 36.0 36.0 36.0 24 35.07172606512772 36.0 36.0 36.0 36.0 36.0 25 35.05160053281456 36.0 36.0 36.0 36.0 36.0 26 35.01529585581249 36.0 36.0 36.0 36.0 36.0 27 35.000484262917574 36.0 36.0 36.0 36.0 36.0 28 34.9816101261507 36.0 36.0 36.0 36.0 36.0 29 34.96599379608645 36.0 36.0 36.0 36.0 36.0 30 34.94773177767527 36.0 36.0 36.0 36.0 36.0 31 34.95061521028459 36.0 36.0 36.0 36.0 36.0 32 34.920463889613124 36.0 36.0 36.0 32.0 36.0 33 34.900459945314644 36.0 36.0 36.0 32.0 36.0 34 34.8973195483444 36.0 36.0 36.0 32.0 36.0 35 34.88239138137355 36.0 36.0 36.0 32.0 36.0 36 34.86536905931824 36.0 36.0 36.0 32.0 36.0 37 34.855870152356886 36.0 36.0 36.0 32.0 36.0 38 34.841030564970616 36.0 36.0 36.0 32.0 36.0 39 34.83304294271408 36.0 36.0 36.0 32.0 36.0 40 34.82078219115809 36.0 36.0 36.0 32.0 36.0 41 34.79446611580193 36.0 36.0 36.0 32.0 36.0 42 34.772795454697395 36.0 36.0 36.0 32.0 36.0 43 34.7622737042311 36.0 36.0 36.0 32.0 36.0 44 34.73290664714573 36.0 36.0 36.0 32.0 36.0 45 34.72074659219296 36.0 36.0 36.0 32.0 36.0 46 34.71115158473891 36.0 36.0 36.0 32.0 36.0 47 34.682842886557964 36.0 36.0 36.0 32.0 36.0 48 34.67470651745185 36.0 36.0 36.0 32.0 36.0 49 34.65747528128196 36.0 36.0 36.0 32.0 36.0 50 34.22582278734883 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 9.0 21 28.0 22 132.0 23 380.0 24 966.0 25 2462.0 26 5235.0 27 10247.0 28 18015.0 29 29493.0 30 45926.0 31 68631.0 32 105607.0 33 182356.0 34 413595.0 35 1510241.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.93090304190456 17.351520116359744 11.840022068227604 26.877554773508095 2 16.39136638942339 19.23667216139027 36.63781414463031 27.73414730455602 3 19.181380182599828 22.016937970293164 28.037902145178183 30.76377970192883 4 13.081282632384697 15.090660369159597 34.362235347599665 37.46582165085604 5 15.146189740812794 35.86817185107933 33.18671740772681 15.798921000381059 6 36.59752160800493 33.90332115223752 15.589393170842586 13.909764068914972 7 31.452228862905546 29.51475936436627 19.582063135516737 19.45094863721145 8 28.21263947106289 33.82800017381654 18.38394068844722 19.57541966667335 9 26.510825093760655 14.649809804590094 18.079134995286896 40.76023010636236 10 15.818105925349943 27.369013929145495 31.561504132114 25.251376013390566 11 37.88536297573922 21.052442456696284 21.30050707633889 19.761687491225608 12 24.2639955743634 23.07172272250189 28.77023124285514 23.89405046027958 13 29.87129219229458 19.33190937472841 24.58346703836666 26.21333139461035 14 23.19711297406791 18.856211935848325 24.898509523140998 33.048165566942764 15 25.18075249192756 27.108235895790294 21.61554956111323 26.095462051168916 16 25.863178381702966 25.95585353481753 23.15153181415164 25.029436269327864 17 24.42891237640641 26.003915886163536 24.804372823114925 24.76279891431513 18 24.90230119185652 25.611231236877565 25.16507369454629 24.321393876719625 19 25.574848077655883 25.176114598584064 24.818244720322497 24.430792603437556 20 25.69656376915749 24.696154296124213 24.798773252218677 24.808508682499625 21 25.72150578608532 24.61321640828169 24.745542608451494 24.9197351971815 22 25.561602922792027 24.456697953644465 24.892451013818416 25.089248109745093 23 24.83308799842228 24.632697495996158 25.019063420919917 25.515151084661646 24 24.981061785168567 24.78848322552583 25.003582905508647 25.226872083796952 25 25.260359759213447 24.50392195286637 25.007071757552158 25.228646530368025 26 24.961434325539418 25.090376548058764 24.944762923470325 25.003426202931493 27 25.09020941620845 25.024234118295922 24.779177042769042 25.106379422726587 28 25.14203198179584 24.84290512802621 24.957349666715274 25.057713223462674 29 24.96315785735207 25.054704366613894 25.041835208762393 24.94030256727164 30 25.05169633765553 25.105889225058426 24.980790146504642 24.8616242907814 31 25.213155961723434 24.729601331707695 24.763905172651523 25.29333753391735 32 25.076442121677307 24.94194242794719 24.64707932181068 25.334536128564828 33 24.836817048743047 24.932040181738717 24.93212374745438 25.299019022063856 34 25.364452804771958 24.79323649132542 24.865855462342175 24.976455241560448 35 25.293681384684486 24.82575496432787 25.151118214199908 24.729445436787735 36 25.036549570158673 25.083095693230128 24.867412490990567 25.012942245620636 37 25.330433013175536 24.734686305388504 24.901610705557474 25.033269975878486 38 24.99065108946667 24.920288786279517 24.83116598776515 25.257894136488662 39 25.304629007141124 24.88366583504678 24.769264131305412 25.042441026506683 40 25.450941493135492 24.860257231985948 24.794658145192088 24.89414312968647 41 24.963293391306237 25.066790568010223 25.054255584961698 24.915660455721845 42 25.34562077192748 24.881896015009005 24.901618314996888 24.870864898066632 43 25.086096456444512 24.66432619128999 24.946453477828857 25.303123874436643 44 24.93871286785337 25.043048282184465 24.873529349088244 25.14470950087392 45 24.95304551294774 25.022030481244318 24.86872590905767 25.15619809675027 46 25.039945046312855 24.9544141783187 24.81590180538239 25.18973896998606 47 25.06083640022329 24.923035268398834 25.038022750139554 24.97810558123832 48 25.210113879758957 25.128633902523205 24.644851760761416 25.01640045695643 49 25.136592385590816 24.97175391475699 24.711731150752197 25.17992254889999 50 24.969780080884508 25.175522053542217 24.85683927014247 24.99785859543081 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 23.0 1 26.5 2 30.0 3 82.0 4 134.0 5 154.5 6 175.0 7 153.0 8 131.0 9 198.5 10 266.0 11 437.0 12 608.0 13 1059.5 14 1511.0 15 1899.5 16 2288.0 17 2502.0 18 2716.0 19 3144.0 20 3572.0 21 4522.5 22 5473.0 23 7083.5 24 8694.0 25 10973.5 26 13253.0 27 16542.5 28 19832.0 29 22985.0 30 26138.0 31 30681.0 32 35224.0 33 41503.5 34 47783.0 35 54602.5 36 61422.0 37 69356.0 38 77290.0 39 86747.5 40 96205.0 41 106428.0 42 116651.0 43 125386.0 44 134121.0 45 144948.5 46 155776.0 47 163803.0 48 171830.0 49 179712.5 50 187595.0 51 191193.0 52 194791.0 53 195442.0 54 196093.0 55 191437.0 56 186781.0 57 177324.0 58 167867.0 59 155976.5 60 144086.0 61 126842.5 62 109599.0 63 93894.5 64 78190.0 65 65667.0 66 53144.0 67 44002.0 68 34860.0 69 29449.0 70 24038.0 71 18798.5 72 13559.0 73 11407.0 74 9255.0 75 7060.5 76 4866.0 77 4010.0 78 3154.0 79 2631.5 80 2109.0 81 1618.0 82 1127.0 83 851.5 84 576.0 85 446.5 86 317.0 87 206.5 88 96.0 89 62.5 90 29.0 91 21.0 92 13.0 93 13.0 94 13.0 95 12.0 96 11.0 97 9.5 98 8.0 99 6.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03125355153994772 2 0.005139287218467339 3 2.924797604005803E-4 4 0.0 5 0.0 6 8.356564582873723E-5 7 0.0 8 0.0 9 0.0 10 4.178282291436861E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.192221041161094E-4 17 0.0 18 1.2534846874310583E-4 19 0.0 20 3.342625833149489E-4 21 0.0 22 0.0 23 4.178282291436861E-5 24 7.938736353730036E-4 25 2.0891411457184305E-4 26 3.342625833149489E-4 27 3.342625833149489E-4 28 0.0012117018645166897 29 3.760454062293175E-4 30 0.0010445705728592152 31 4.178282291436861E-4 32 5.849595208011606E-4 33 8.356564582873723E-5 34 5.849595208011606E-4 35 1.2534846874310583E-4 36 1.2534846874310583E-4 37 0.0012117018645166897 38 4.178282291436861E-5 39 2.924797604005803E-4 40 8.356564582873723E-5 41 0.001086353395773584 42 0.004094716645608124 43 0.0034261914789782263 44 0.0035515399477213322 45 0.0022144896144615364 46 0.0016713129165747444 47 0.0010027877499448467 48 0.0042618479372655985 49 0.0031754945414920145 50 0.0016295300936603758 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2393328.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.13074191271202 #Duplication Level Percentage of deduplicated Percentage of total 1 66.56271876927353 33.36838475630884 2 17.203277331117008 17.248261118780718 3 6.853022724091737 10.306413405101805 4 3.2827035282739336 6.582574534073989 5 1.8183961301924703 4.557877354887651 6 1.1180436826712992 3.3629015581879798 7 0.7226771935889256 2.5359840714606614 8 0.488061322697536 1.9573500964581632 9 0.34298092048099527 1.5474499205055459 >10 1.5076813143709484 12.801179721126072 >50 0.06863655953455013 2.334226687058166 >100 0.030041427339074136 2.7773316114044144 >500 0.0016753298742984 0.5698838107415817 >1k 8.376649371471552E-5 0.050181353904275354 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.356564582873723E-5 2 0.0 0.0 0.0 0.0 8.356564582873723E-5 3 0.0 0.0 0.0 0.0 8.356564582873723E-5 4 0.0 0.0 0.0 0.0 8.356564582873723E-5 5 0.0 0.0 0.0 0.0 1.2534846874310583E-4 6 0.0 0.0 0.0 0.0 1.2534846874310583E-4 7 0.0 0.0 0.0 0.0 1.2534846874310583E-4 8 0.0 0.0 0.0 0.0 1.2534846874310583E-4 9 0.0 0.0 0.0 0.0 1.2534846874310583E-4 10 0.0 0.0 0.0 4.178282291436861E-5 1.2534846874310583E-4 11 0.0 0.0 0.0 4.178282291436861E-5 1.2534846874310583E-4 12 0.0 0.0 0.0 1.6713129165747445E-4 7.520908124586351E-4 13 0.0 0.0 0.0 1.6713129165747445E-4 0.0010027877499448467 14 0.0 0.0 0.0 1.6713129165747445E-4 0.0010027877499448467 15 0.0 0.0 0.0 2.5069693748621167E-4 0.0013370503332597956 16 0.0 0.0 0.0 2.5069693748621167E-4 0.0014206159790885328 17 0.0 0.0 0.0 2.924797604005803E-4 0.0014623988020029013 18 0.0 0.0 0.0 4.596110520580547E-4 0.0015459644478316387 19 0.0 0.0 0.0 5.013938749724233E-4 0.0015459644478316387 20 0.0 0.0 0.0 5.013938749724233E-4 0.0017966613853178503 21 0.0 0.0 0.0 6.267423437155291E-4 0.0020055754998896933 22 0.0 0.0 0.0 6.267423437155291E-4 0.002047358322804062 23 0.0 0.0 0.0 7.520908124586351E-4 0.002047358322804062 24 0.0 0.0 0.0 0.0010863533957735838 0.002047358322804062 25 0.0 0.0 0.0 0.0013370503332597956 0.002047358322804062 26 0.0 0.0 0.0 0.0016713129165747444 0.0021727067915471676 27 0.0 0.0 0.0 0.0022980552602902735 0.0022144896144615364 28 0.0 0.0 0.0 0.0028830147810914343 0.002256272437375905 29 0.0 0.0 0.0 0.00451254487475181 0.002256272437375905 30 0.0 0.0 0.0 0.007562690947500719 0.002256272437375905 31 0.0 0.0 0.0 0.013286937686769218 0.0023816209061190106 32 0.0 0.0 0.0 0.019972189353068198 0.0023816209061190106 33 0.0 0.0 0.0 0.025780001738165432 0.0023816209061190106 34 0.0 0.0 0.0 0.03233990493572131 0.0025487521977764853 35 0.0 0.0 0.0 0.03877445966453407 0.0025487521977764853 36 0.0 0.0 0.0 0.049554427976441176 0.0025487521977764853 37 0.0 0.0 0.0 0.06513942092350067 0.0025487521977764853 38 0.0 0.0 0.0 0.08786927658891719 0.0027158834894339596 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1565 0.0 28.404177 1 TCAACGC 2240 0.0 18.856554 4 GGTATCA 750 0.0 18.77863 1 ATCAACG 2255 0.0 18.633562 3 CAACGCA 2310 0.0 18.189907 5 TATCAAC 2460 0.0 17.43884 2 AACGCAG 2455 0.0 17.294775 6 ACGGACC 400 0.0 15.949501 8 GTATAAT 310 0.0 15.617309 1 CGACGGT 275 0.0 15.199523 7 GACGGAC 440 0.0 14.99953 7 TACGCTC 250 9.094947E-12 14.959531 34 GTATAGA 325 0.0 14.896509 1 GTCTAGA 435 0.0 14.670805 1 GTATAAG 315 0.0 14.670804 1 CGTCGTA 270 1.8189894E-12 14.6665125 10 TATATCG 105 7.164151E-4 14.666207 5 CGGACCA 405 0.0 14.666207 9 GTCGTGC 200 2.1193046E-8 14.299552 8 TCGTAAT 110 0.0010185916 13.999855 12 >>END_MODULE