##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062306_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1294841 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.248549435799454 32.0 32.0 32.0 32.0 32.0 2 31.388829979897146 32.0 32.0 32.0 32.0 32.0 3 31.529773153615 32.0 32.0 32.0 32.0 32.0 4 31.619812007806363 32.0 32.0 32.0 32.0 32.0 5 31.587222678305675 32.0 32.0 32.0 32.0 32.0 6 35.21223918612401 36.0 36.0 36.0 36.0 36.0 7 35.21827699308255 36.0 36.0 36.0 36.0 36.0 8 35.16749160707763 36.0 36.0 36.0 36.0 36.0 9 35.25508305652972 36.0 36.0 36.0 36.0 36.0 10 35.12398279016497 36.0 36.0 36.0 36.0 36.0 11 35.25696668548493 36.0 36.0 36.0 36.0 36.0 12 35.172271344512566 36.0 36.0 36.0 36.0 36.0 13 35.211218211347955 36.0 36.0 36.0 36.0 36.0 14 35.17599149239173 36.0 36.0 36.0 36.0 36.0 15 35.15237546540463 36.0 36.0 36.0 36.0 36.0 16 35.163915878474654 36.0 36.0 36.0 36.0 36.0 17 35.14486257386042 36.0 36.0 36.0 36.0 36.0 18 35.13896764158688 36.0 36.0 36.0 36.0 36.0 19 35.13693959335548 36.0 36.0 36.0 36.0 36.0 20 35.12631743974743 36.0 36.0 36.0 36.0 36.0 21 35.12303209428802 36.0 36.0 36.0 36.0 36.0 22 35.107583865509355 36.0 36.0 36.0 36.0 36.0 23 35.07619622795386 36.0 36.0 36.0 36.0 36.0 24 35.0592752314763 36.0 36.0 36.0 36.0 36.0 25 35.04569055196738 36.0 36.0 36.0 36.0 36.0 26 34.996940164854216 36.0 36.0 36.0 36.0 36.0 27 34.99008063538303 36.0 36.0 36.0 36.0 36.0 28 34.97148066828282 36.0 36.0 36.0 36.0 36.0 29 34.95246134467475 36.0 36.0 36.0 36.0 36.0 30 34.9281672421556 36.0 36.0 36.0 32.0 36.0 31 34.92685820112276 36.0 36.0 36.0 32.0 36.0 32 34.90512734768207 36.0 36.0 36.0 32.0 36.0 33 34.88371699691314 36.0 36.0 36.0 32.0 36.0 34 34.874824013141385 36.0 36.0 36.0 32.0 36.0 35 34.86512938654244 36.0 36.0 36.0 32.0 36.0 36 34.842207653294885 36.0 36.0 36.0 32.0 36.0 37 34.82882068145819 36.0 36.0 36.0 32.0 36.0 38 34.81289285711527 36.0 36.0 36.0 32.0 36.0 39 34.79096584059356 36.0 36.0 36.0 32.0 36.0 40 34.78103334695148 36.0 36.0 36.0 32.0 36.0 41 34.74902323914674 36.0 36.0 36.0 32.0 36.0 42 34.72027916941153 36.0 36.0 36.0 32.0 36.0 43 34.72023283167586 36.0 36.0 36.0 32.0 36.0 44 34.67705224039091 36.0 36.0 36.0 32.0 36.0 45 34.65598401657037 36.0 36.0 36.0 32.0 36.0 46 34.63586803321798 36.0 36.0 36.0 32.0 36.0 47 34.607849149046096 36.0 36.0 36.0 32.0 36.0 48 34.58939360122208 36.0 36.0 36.0 32.0 36.0 49 34.573943055556626 36.0 36.0 36.0 32.0 36.0 50 34.14591830193823 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 8.0 21 19.0 22 88.0 23 244.0 24 639.0 25 1505.0 26 3219.0 27 5996.0 28 10478.0 29 16885.0 30 25503.0 31 38115.0 32 58055.0 33 97435.0 34 219680.0 35 816969.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.93390674513354 17.66895279472589 12.05045447030995 26.346685989830622 2 16.246159597029934 19.763034200246217 36.746999118000964 27.24380708472288 3 18.637775536399147 23.08790752202206 28.499704210101957 29.774612731476836 4 12.673370707291474 15.650415765333351 35.21505729274869 36.46115623462649 5 14.7694581805797 36.49336096092107 33.164535259541516 15.57264559895771 6 35.26525650639731 34.781645005062394 16.207318118595257 13.745780369945034 7 30.83297485946151 30.172816585202355 19.963146054225962 19.031062501110174 8 28.378773918959933 33.06792108065778 18.910816077031853 19.642488923350435 9 27.248905464068564 14.176644082169162 18.32889134650509 40.245559107257186 10 16.106314293657903 26.7756634024281 31.3389299063977 25.779092397516294 11 37.387447570782825 21.207391486676745 21.79109249707107 19.614068445469364 12 24.427033455870994 23.513098143399958 28.491782768527386 23.56808563220166 13 29.408089487435134 19.416129084574862 25.072730937620914 26.10305049036909 14 23.53794790248378 19.200349695445233 25.031258664191203 32.23044373787979 15 25.185254405753295 26.88832065095251 22.08062611548445 25.845798827809745 16 25.786204808669567 25.907919816377156 23.431142978063495 24.87473239688978 17 24.197256651588884 25.866187431507033 25.017511802607423 24.91904411429666 18 24.808779463099686 25.23462358283649 25.678153285348 24.278443668715827 19 25.561825737677445 25.07867761369929 25.357321864228886 24.002174784394377 20 25.722968563562155 24.471303293469823 24.9828742658331 24.822853877134925 21 26.312208458187886 24.385715609650614 24.722591208180162 24.57948472398134 22 25.848888010188126 24.20428454149969 25.072113101145238 24.87471434716695 23 24.612211074564367 24.27827045946182 25.5004282379072 25.609090228066613 24 24.692854958341957 24.729848288730242 25.451565767808543 25.12573098511926 25 24.929354151365537 24.384421538121728 25.418140788159764 25.268083522352974 26 24.688010441484824 25.071070831418673 25.472048562172013 24.76887016492449 27 25.12835602346552 24.835809322570583 25.054910428811063 24.980924225152837 28 24.8453076393158 24.63485497687724 25.470873351518502 25.048964032288456 29 24.83766283915492 24.97806672041865 25.32961703258173 24.8546534078447 30 24.81794780900217 25.01975176491577 25.405133219186283 24.75716720689578 31 25.082076221412336 24.72882603393642 24.903752066868854 25.285345677782384 32 25.113567031965584 24.755682213109058 24.82619339990578 25.30455735501958 33 24.748945621810897 24.521504217898904 25.251633600779712 25.47791655951049 34 25.22116820058865 24.613520395357224 25.4350960628778 24.730215341176326 35 25.613319967439942 24.48669254377768 25.384951631014847 24.515035857767536 36 24.80959007999456 24.889754548445442 25.138125387114062 25.162529984445932 37 25.480994983070953 24.760197587919826 25.035294590119367 24.72351283888985 38 24.903366513726397 24.546797637702237 25.332685634761333 25.217150213810037 39 25.280905384563702 24.62128262298323 24.967505411903172 25.130306580549895 40 25.604844470771226 24.683338520601435 25.122312692640076 24.589504315987263 41 24.699939219397894 25.050026219840426 25.35261630758228 24.897418253179396 42 25.587579483781177 24.975034002414347 25.054662597962096 24.382723915842384 43 25.20223481636291 24.35027672612069 25.21806759747973 25.229420860036672 44 24.88245107276912 24.85688688425833 25.14697477563756 25.11368726733499 45 25.035468277805624 25.054235379616763 24.978858048885595 24.931438293692015 46 24.973220029795854 24.792575904900406 25.028517675552646 25.205686389751094 47 25.016102549686213 24.82294918390579 25.33892584795177 24.822022418456225 48 25.452180716275567 25.26952434427135 24.581608781716753 24.696686157736327 49 25.0094803091469 25.22634962144411 24.722097577288654 25.042072492120337 50 25.149828701000608 25.324294183248224 24.731544038825714 24.794333076925454 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 196.0 1 122.5 2 49.0 3 149.0 4 249.0 5 279.0 6 309.0 7 238.5 8 168.0 9 240.0 10 312.0 11 529.0 12 746.0 13 1279.0 14 1812.0 15 2335.5 16 2859.0 17 2819.0 18 2779.0 19 2702.5 20 2626.0 21 3097.0 22 3568.0 23 4297.0 24 5026.0 25 6333.0 26 7640.0 27 9498.0 28 11356.0 29 13203.0 30 15050.0 31 17314.5 32 19579.0 33 22260.0 34 24941.0 35 29146.5 36 33352.0 37 38366.0 38 43380.0 39 48740.5 40 54101.0 41 59371.0 42 64641.0 43 68460.5 44 72280.0 45 78621.0 46 84962.0 47 90030.0 48 95098.0 49 98822.5 50 102547.0 51 101365.0 52 100183.0 53 99291.5 54 98400.0 55 98432.5 56 98465.0 57 94581.0 58 90697.0 59 82798.0 60 74899.0 61 65628.0 62 56357.0 63 48693.0 64 41029.0 65 34659.5 66 28290.0 67 23938.5 68 19587.0 69 17042.0 70 14497.0 71 11413.0 72 8329.0 73 7197.5 74 6066.0 75 4496.5 76 2927.0 77 2551.0 78 2175.0 79 1844.5 80 1514.0 81 1147.0 82 780.0 83 661.5 84 543.0 85 416.5 86 290.0 87 197.0 88 104.0 89 69.5 90 35.0 91 26.0 92 17.0 93 15.0 94 13.0 95 10.0 96 7.0 97 7.5 98 8.0 99 5.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0283432483216086 2 0.004247625770268318 3 2.3168867837827193E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 7.722955945942398E-5 11 0.0 12 7.722955945942398E-5 13 0.0 14 0.0 15 0.0 16 0.0010039842729725116 17 0.0 18 7.722955945942398E-5 19 0.0 20 4.6337735675654385E-4 21 7.722955945942398E-5 22 0.0 23 0.0 24 0.0010039842729725116 25 1.5445911891884796E-4 26 4.6337735675654385E-4 27 3.861477972971199E-4 28 0.0010039842729725116 29 3.861477972971199E-4 30 0.0015445911891884797 31 6.178364756753918E-4 32 8.495251540536638E-4 33 1.5445911891884796E-4 34 9.267547135130877E-4 35 2.3168867837827193E-4 36 2.3168867837827193E-4 37 0.0019307389864855996 38 0.0 39 7.722955945942398E-4 40 3.089182378376959E-4 41 0.0015445911891884797 42 0.006178364756753919 43 0.004556544008106014 44 0.004711003127024863 45 0.0016990503081073275 46 0.0023168867837827195 47 0.0011584433918913597 48 0.004633773567565439 49 0.004015937091890047 50 0.002239657224323295 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1294841.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.975146486642416 #Duplication Level Percentage of deduplicated Percentage of total 1 78.53902805221868 47.10389712350334 2 13.180607220281177 15.810176976385208 3 3.739611657536749 6.728512708917665 4 1.4963059186611072 3.589646666421199 5 0.8104483139446018 2.4303378174339927 6 0.4763010151935268 1.7139733894780957 7 0.3167357860610548 1.3297392616601518 8 0.22923564092438134 1.0998752915519308 9 0.18009811873786274 0.9721269947944833 >10 0.9202107030580877 9.810657272768715 >50 0.06303524675314534 2.6178188940602283 >100 0.044750426327405696 5.22459540716832 >500 0.003242768126947783 1.315499877600484 >1k 3.89132175233734E-4 0.2531423182561783 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.722955945942398E-5 2 0.0 0.0 0.0 0.0 7.722955945942398E-5 3 0.0 0.0 0.0 0.0 7.722955945942398E-5 4 0.0 0.0 0.0 0.0 7.722955945942398E-5 5 0.0 0.0 0.0 0.0 7.722955945942398E-5 6 0.0 0.0 0.0 0.0 7.722955945942398E-5 7 0.0 0.0 0.0 7.722955945942398E-5 7.722955945942398E-5 8 0.0 0.0 0.0 1.5445911891884796E-4 7.722955945942398E-5 9 0.0 0.0 0.0 1.5445911891884796E-4 7.722955945942398E-5 10 0.0 0.0 0.0 1.5445911891884796E-4 7.722955945942398E-5 11 0.0 0.0 0.0 1.5445911891884796E-4 7.722955945942398E-5 12 0.0 0.0 0.0 1.5445911891884796E-4 2.3168867837827193E-4 13 0.0 0.0 0.0 1.5445911891884796E-4 2.3168867837827193E-4 14 0.0 0.0 0.0 1.5445911891884796E-4 3.089182378376959E-4 15 0.0 0.0 0.0 2.3168867837827193E-4 3.089182378376959E-4 16 0.0 0.0 0.0 2.3168867837827193E-4 3.089182378376959E-4 17 0.0 0.0 0.0 2.3168867837827193E-4 3.089182378376959E-4 18 0.0 0.0 0.0 2.3168867837827193E-4 3.089182378376959E-4 19 0.0 0.0 0.0 2.3168867837827193E-4 3.089182378376959E-4 20 0.0 0.0 0.0 2.3168867837827193E-4 3.8614779729711986E-4 21 0.0 0.0 0.0 3.089182378376959E-4 3.8614779729711986E-4 22 0.0 0.0 0.0 5.406069162159678E-4 3.8614779729711986E-4 23 0.0 0.0 0.0 7.722955945942397E-4 4.6337735675654385E-4 24 0.0 0.0 0.0 0.0010812138324319356 4.6337735675654385E-4 25 0.0 0.0 0.0 0.0012356729513507837 4.6337735675654385E-4 26 0.0 0.0 0.0 0.0012356729513507837 6.178364756753918E-4 27 0.0 0.0 0.0 0.0013129025108102076 6.178364756753918E-4 28 0.0 0.0 0.0 0.0020851981054044472 6.178364756753918E-4 29 0.0 0.0 0.0 0.0038614779729711987 6.178364756753918E-4 30 0.0 0.0 0.0 0.007491267267564126 6.178364756753918E-4 31 0.0 0.0 0.0 0.01552314145134422 6.178364756753918E-4 32 0.0 0.0 0.0 0.023632245194583738 6.178364756753918E-4 33 0.0 0.0 0.0 0.03135520114052613 6.178364756753918E-4 34 0.0 0.0 0.0 0.04000491179998162 6.950660351348158E-4 35 0.0 0.0 0.0 0.05035367276754443 6.950660351348158E-4 36 0.0 0.0 0.0 0.0641005343513219 6.950660351348158E-4 37 0.0 0.0 0.0 0.08811892734320276 6.950660351348158E-4 38 0.0 0.0 0.0 0.11298684548913727 6.950660351348158E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1490 0.0 24.665121 1 GGTATCA 810 0.0 22.549978 1 TATTCGC 50 0.0025800893 22.000656 44 GTATCGT 55 0.0044850106 19.999052 10 TATACCG 80 8.9924724E-5 19.249088 5 TACACCG 105 1.7937018E-6 18.856249 5 CGCAATA 190 1.8189894E-12 18.526869 36 CTAGCGG 190 1.8189894E-12 18.526154 29 CGGATCG 100 2.4834222E-5 17.599844 26 ATACGAA 205 5.456968E-12 17.171907 40 GTGTAGG 245 0.0 17.066349 1 GCGTAAC 155 1.4400939E-8 17.031452 11 CGAATGC 220 1.8189894E-12 17.000507 43 TCAACGC 2155 0.0 16.84375 4 ATCAACG 2165 0.0 16.76595 3 TATAACA 265 0.0 16.602985 4 ATAACGC 345 0.0 16.578924 3 CAACGCA 2195 0.0 16.536802 5 CGCGTAA 160 2.1307642E-8 16.499218 10 TGTACTA 120 6.4101296E-6 16.499218 5 >>END_MODULE