##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062305_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5979349 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.226476494347462 32.0 32.0 32.0 32.0 32.0 2 31.273309853631222 32.0 32.0 32.0 32.0 32.0 3 31.47014750267964 32.0 32.0 32.0 32.0 32.0 4 31.57563657849709 32.0 32.0 32.0 32.0 32.0 5 31.516535328511516 32.0 32.0 32.0 32.0 32.0 6 35.15796886918626 36.0 36.0 36.0 36.0 36.0 7 35.16731102332378 36.0 36.0 36.0 36.0 36.0 8 35.09684365304651 36.0 36.0 36.0 36.0 36.0 9 35.22462779810979 36.0 36.0 36.0 36.0 36.0 10 35.069797063192 36.0 36.0 36.0 36.0 36.0 11 35.22598680893188 36.0 36.0 36.0 36.0 36.0 12 35.1389291710519 36.0 36.0 36.0 36.0 36.0 13 35.18306491225048 36.0 36.0 36.0 36.0 36.0 14 35.1384737703051 36.0 36.0 36.0 36.0 36.0 15 35.10179419197642 36.0 36.0 36.0 36.0 36.0 16 35.12206395712978 36.0 36.0 36.0 36.0 36.0 17 35.104103640714065 36.0 36.0 36.0 36.0 36.0 18 35.09953759180138 36.0 36.0 36.0 36.0 36.0 19 35.09240454102947 36.0 36.0 36.0 36.0 36.0 20 35.09717362207826 36.0 36.0 36.0 36.0 36.0 21 35.090559524122106 36.0 36.0 36.0 36.0 36.0 22 35.071061080395204 36.0 36.0 36.0 36.0 36.0 23 35.03978710725867 36.0 36.0 36.0 36.0 36.0 24 35.021131062930095 36.0 36.0 36.0 36.0 36.0 25 35.010177863844376 36.0 36.0 36.0 36.0 36.0 26 34.96444763468398 36.0 36.0 36.0 36.0 36.0 27 34.9474544804125 36.0 36.0 36.0 32.0 36.0 28 34.93380215806102 36.0 36.0 36.0 32.0 36.0 29 34.91288282386594 36.0 36.0 36.0 32.0 36.0 30 34.89295741058098 36.0 36.0 36.0 32.0 36.0 31 34.894923678146235 36.0 36.0 36.0 32.0 36.0 32 34.86552265137894 36.0 36.0 36.0 32.0 36.0 33 34.84617790331355 36.0 36.0 36.0 32.0 36.0 34 34.83898681946814 36.0 36.0 36.0 32.0 36.0 35 34.82755848504578 36.0 36.0 36.0 32.0 36.0 36 34.80266681205596 36.0 36.0 36.0 32.0 36.0 37 34.79534076368515 36.0 36.0 36.0 32.0 36.0 38 34.78245140064579 36.0 36.0 36.0 32.0 36.0 39 34.76714973486244 36.0 36.0 36.0 32.0 36.0 40 34.75479788853268 36.0 36.0 36.0 32.0 36.0 41 34.72968562296665 36.0 36.0 36.0 32.0 36.0 42 34.70501036149587 36.0 36.0 36.0 32.0 36.0 43 34.6927672226525 36.0 36.0 36.0 32.0 36.0 44 34.658613504580515 36.0 36.0 36.0 32.0 36.0 45 34.64538664660651 36.0 36.0 36.0 32.0 36.0 46 34.631028060078116 36.0 36.0 36.0 32.0 36.0 47 34.60548514562371 36.0 36.0 36.0 32.0 36.0 48 34.58569570031788 36.0 36.0 36.0 32.0 36.0 49 34.57093104951726 36.0 36.0 36.0 32.0 36.0 50 34.11554000276619 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 4.0 19 6.0 20 27.0 21 91.0 22 287.0 23 866.0 24 2367.0 25 5743.0 26 12714.0 27 25168.0 28 44700.0 29 74363.0 30 115651.0 31 180169.0 32 284993.0 33 502083.0 34 1144434.0 35 3585683.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.821591353367545 16.625180822682772 11.922327257981166 26.630900565968513 2 16.714430337320504 18.273329507779696 36.60437681915194 28.40786333574786 3 19.832914473905365 21.03691164215139 27.30339654941446 31.82677733452878 4 13.291616410351095 14.42963346505338 33.32099085050745 38.957759274088076 5 15.550326816623954 35.54834666728658 32.446887594916305 16.454438921173164 6 37.82645089052396 32.95247221894706 14.950617500746318 14.27045938978266 7 32.78470616115567 28.909702377298935 18.340441409257092 19.9651500522883 8 29.14670142184375 33.40015777637331 17.297903166381488 20.155237635401445 9 26.683138916962363 14.605636834377789 17.41276516891722 41.29845907974263 10 16.143256493813286 26.72515133346545 30.56199299421592 26.56959917850534 11 38.6186857465587 20.81569414998188 20.613046671134267 19.952573432325156 12 25.047843837180267 22.545949400177175 27.728286139511177 24.67792062313138 13 30.000590365272206 18.79405266359264 24.48463871234143 26.720718258793724 14 23.547346040513776 18.24215311733769 24.231049232951616 33.97945160919692 15 25.568352006213384 26.63781625725476 21.236676434173688 26.557155302358165 16 26.38740135146074 25.716504317890966 22.416256195532995 25.4798381351153 17 24.92898474399136 25.792724258109033 24.06430867306792 25.213982324831687 18 25.516812892392803 25.04883482123445 24.573932908983267 24.86041937738948 19 25.945817847394427 24.699461429663998 24.511430926677804 24.84328979626377 20 26.178213701976826 24.21170476209112 24.358142647157447 25.251938888774607 21 26.35929976969057 23.93239596230157 24.382328036824088 25.325976231183773 22 26.218439499015695 23.73495843778311 24.53166724337382 25.514934819827378 23 25.306643016369513 23.910938769735225 24.849201760660485 25.933216453234774 24 25.283261150825986 24.292223421919132 24.664859762567048 25.759655664687838 25 25.532274999188875 23.951028659713607 24.753375543162498 25.76332079793502 26 25.321972177108403 24.46766112740895 24.819390027730574 25.390976667752074 27 25.584317432379933 24.419788380866276 24.458923219954354 25.536970966799437 28 25.6252509725736 24.226761967534667 24.62830136075845 25.519685699133284 29 25.316838238774253 24.548940655891403 24.75215798202904 25.382063123305304 30 25.4723402689626 24.56324935987169 24.55358262797967 25.410827743186044 31 25.612273517041174 24.267921749538786 24.434596416009665 25.68520831741038 32 25.63402499189286 24.402475942413986 24.215932335880844 25.74756672981231 33 25.188223429715368 24.400676998927974 24.58451030466624 25.826589266690412 34 25.659528771478037 24.27836536909712 24.679264670638254 25.382841188786593 35 25.758148690448017 24.336134369457476 24.699920643349135 25.205796296745376 36 25.339812092784914 24.474280914897882 24.628629208537273 25.55727778377993 37 25.86816072249864 24.162846510850024 24.47531044863486 25.493682318016475 38 25.406984172856305 24.212021109993934 24.717377212364962 25.663617504784803 39 25.746323322817073 24.37228564088979 24.35669856331297 25.52469247298017 40 25.832340749199496 24.35099046015431 24.385793620769643 25.43087516987655 41 25.27566441516965 24.5477675325846 24.72237046561284 25.454197586632908 42 25.808516894200633 24.468668350104718 24.3689699707344 25.353844784960245 43 25.53712596112018 24.07626844950177 24.630248979318093 25.756356610059957 44 25.31192027150611 24.44292544754287 24.517251114383253 25.727903166567767 45 25.43676323903551 24.557399871421186 24.41689640708508 25.588940482458224 46 25.488529848817947 24.31695465040143 24.587475111699444 25.607040389081178 47 25.50664109837937 24.51250835802693 24.631569476067526 25.34928106752617 48 25.710155146680545 24.741767846618128 24.129386350758207 25.41869065594312 49 25.50538850829546 24.615072503229158 24.22585089126096 25.65368809721442 50 25.45996207212184 24.75689648338427 24.371346004837065 25.411795439656824 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 33.0 2 46.0 3 141.0 4 236.0 5 306.5 6 377.0 7 337.5 8 298.0 9 380.5 10 463.0 11 893.5 12 1324.0 13 2411.0 14 3498.0 15 4815.5 16 6133.0 17 5958.0 18 5783.0 19 5612.0 20 5441.0 21 6599.0 22 7757.0 23 9969.5 24 12182.0 25 16292.0 26 20402.0 27 25576.0 28 30750.0 29 37690.5 30 44631.0 31 54501.5 32 64372.0 33 77004.0 34 89636.0 35 107936.0 36 126236.0 37 146568.5 38 166901.0 39 192995.5 40 219090.0 41 245630.5 42 272171.0 43 296207.0 44 320243.0 45 352711.0 46 385179.0 47 413333.0 48 441487.0 49 462937.0 50 484387.0 51 494202.5 52 504018.0 53 507884.5 54 511751.0 55 501942.5 56 492134.0 57 471203.0 58 450272.0 59 418373.5 60 386475.0 61 340788.5 62 295102.0 63 255412.0 64 215722.0 65 181307.5 66 146893.0 67 123215.0 68 99537.0 69 83516.0 70 67495.0 71 52848.5 72 38202.0 73 32502.5 74 26803.0 75 20600.0 76 14397.0 77 11865.0 78 9333.0 79 7641.0 80 5949.0 81 4532.0 82 3115.0 83 2398.5 84 1682.0 85 1259.5 86 837.0 87 572.5 88 308.0 89 208.5 90 109.0 91 85.0 92 61.0 93 48.0 94 35.0 95 37.5 96 40.0 97 31.5 98 23.0 99 18.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030237405443301606 2 0.00431485099799326 3 2.6758765879027966E-4 4 1.672422867439248E-5 5 3.344845734878496E-5 6 6.689691469756992E-5 7 0.0 8 0.0 9 0.0 10 6.689691469756992E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.856933756500917E-4 17 0.0 18 1.5051805806953232E-4 19 0.0 20 3.6793303083663454E-4 21 3.344845734878496E-5 22 0.0 23 3.344845734878496E-5 24 0.0010201779491379411 25 2.508634301158872E-4 26 4.682784028829894E-4 27 3.6793303083663454E-4 28 0.0018396651541831728 29 6.020722322781293E-4 30 0.0013212140652770058 31 6.020722322781293E-4 32 8.362114337196239E-4 33 3.1776034481345713E-4 34 7.024176043244842E-4 35 2.341392014414947E-4 36 2.508634301158872E-4 37 0.0016556986387648554 38 1.672422867439248E-5 39 6.187964609525218E-4 40 1.1706960072074736E-4 41 0.0011372475498586886 42 0.005268132032433631 43 0.00431485099799326 44 0.0042981267693188675 45 0.0022912193283917697 46 0.0022410466423685924 47 0.0011205233211842962 48 0.0038967452811334478 49 0.003946917967156625 50 0.001772768239485603 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 5979349.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.434084330633766 #Duplication Level Percentage of deduplicated Percentage of total 1 66.48070998299767 27.545673437959316 2 16.113560798937478 13.353012740199397 3 6.540654385650228 8.130180761776835 4 3.254148159313345 5.393305970294631 5 1.8546713611926076 3.842330479263291 6 1.1620767447796962 2.8889751505122185 7 0.813412474028969 2.3592100731154027 8 0.5687672957092841 1.8853081675939993 9 0.4467005989919599 1.6657767260259735 >10 2.487879699589163 19.07965805939198 >50 0.1841156614764861 5.234840905401756 >100 0.08728223460583595 6.273625525511567 >500 0.004352745262732132 1.207918000993668 >1k 0.0016678574643383 1.140184001959846 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.36211433719624E-5 2 0.0 0.0 0.0 0.0 8.36211433719624E-5 3 0.0 0.0 0.0 0.0 8.36211433719624E-5 4 0.0 0.0 0.0 0.0 8.36211433719624E-5 5 0.0 1.672422867439248E-5 0.0 0.0 8.36211433719624E-5 6 0.0 1.672422867439248E-5 0.0 0.0 1.5051805806953232E-4 7 0.0 3.344845734878496E-5 0.0 0.0 1.5051805806953232E-4 8 0.0 3.344845734878496E-5 0.0 0.0 1.5051805806953232E-4 9 0.0 3.344845734878496E-5 0.0 0.0 1.672422867439248E-4 10 0.0 3.344845734878496E-5 0.0 0.0 1.8396651541831727E-4 11 0.0 3.344845734878496E-5 0.0 0.0 1.8396651541831727E-4 12 0.0 3.344845734878496E-5 0.0 0.0 5.184510889061669E-4 13 0.0 3.344845734878496E-5 0.0 0.0 6.522449183013067E-4 14 0.0 3.344845734878496E-5 0.0 0.0 6.689691469756992E-4 15 0.0 3.344845734878496E-5 0.0 1.672422867439248E-5 8.529356623940165E-4 16 0.0 3.344845734878496E-5 0.0 5.017268602317744E-5 8.863841197428014E-4 17 0.0 3.344845734878496E-5 0.0 1.0034537204635488E-4 8.863841197428014E-4 18 0.0 3.344845734878496E-5 0.0 1.672422867439248E-4 9.532810344403714E-4 19 0.0 3.344845734878496E-5 0.0 2.508634301158872E-4 9.700052631147638E-4 20 0.0 3.344845734878496E-5 0.0 3.5120880216224206E-4 0.0011037990925099037 21 0.0 3.344845734878496E-5 0.0 4.5155417420859694E-4 0.0012041444645562586 22 0.0 3.344845734878496E-5 0.0 6.020722322781293E-4 0.001220868693230651 23 0.0 3.344845734878496E-5 0.0 7.693145190220541E-4 0.001254317150579436 24 0.0 3.344845734878496E-5 0.0 9.031083484171939E-4 0.001254317150579436 25 0.0 3.344845734878496E-5 0.0 0.0011874202358818661 0.001254317150579436 26 0.0 3.344845734878496E-5 0.0 0.001672422867439248 0.0014048352086489682 27 0.0 3.344845734878496E-5 0.0 0.0020236316696014903 0.0015051805806953233 28 0.0 3.344845734878496E-5 0.0 0.0023915647004381247 0.0015219048093697157 29 0.0 3.344845734878496E-5 0.0 0.0031274307621113936 0.0015219048093697157 30 0.0 3.344845734878496E-5 0.0 0.004231229854621298 0.0015219048093697157 31 0.0 3.344845734878496E-5 0.0 0.00620468883819961 0.0015888017240672857 32 0.0 3.344845734878496E-5 0.0 0.008746771596707267 0.0016891470961136405 33 0.0 3.344845734878496E-5 0.0 0.011456096641958848 0.001739319782136818 34 1.672422867439248E-5 3.344845734878496E-5 0.0 0.014198870144559216 0.0018062166968343877 35 1.672422867439248E-5 3.344845734878496E-5 0.0 0.01705871324788033 0.0018062166968343877 36 1.672422867439248E-5 3.344845734878496E-5 0.0 0.02117287350178088 0.0018062166968343877 37 1.672422867439248E-5 5.017268602317744E-5 0.0 0.02710997468119021 0.0018062166968343877 38 1.672422867439248E-5 5.017268602317744E-5 0.0 0.03585674627789748 0.0019232862975551352 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5280 0.0 27.756725 1 GGTATCA 2140 0.0 24.781706 1 TCAACGC 7430 0.0 19.275099 4 TATCAAC 7685 0.0 19.06555 2 CAACGCA 7675 0.0 18.659803 5 ATCAACG 7810 0.0 18.42176 3 AACGCAG 8025 0.0 17.818565 6 TATACCG 370 0.0 16.64795 5 ACCGTCG 860 0.0 16.627209 8 GCGAAAG 1435 0.0 16.556795 18 GTATAGG 1055 0.0 16.269346 1 AACGTCG 230 1.8189894E-12 16.260593 22 TCTAGCG 665 0.0 16.21093 28 ATACCGT 1085 0.0 15.815005 6 AGCGAAA 1520 0.0 15.630921 17 CGCAATA 705 0.0 15.603617 36 ACGTCGT 240 3.6379788E-12 15.583069 23 ACGGACC 1560 0.0 15.371149 8 TACGAAT 745 0.0 15.061534 41 CGTATAC 235 5.0931703E-11 14.978094 3 >>END_MODULE