##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062304_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1243166 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.10274251387184 32.0 32.0 32.0 32.0 32.0 2 31.07507605581234 32.0 32.0 32.0 32.0 32.0 3 31.34763659881303 32.0 32.0 32.0 32.0 32.0 4 31.487797285318294 32.0 32.0 32.0 32.0 32.0 5 31.415008132461796 32.0 32.0 32.0 32.0 32.0 6 35.009726778242005 36.0 36.0 36.0 36.0 36.0 7 35.02534898798712 36.0 36.0 36.0 36.0 36.0 8 34.957087790367495 36.0 36.0 36.0 36.0 36.0 9 35.10397082931805 36.0 36.0 36.0 36.0 36.0 10 34.91565245510254 36.0 36.0 36.0 32.0 36.0 11 35.098415658085884 36.0 36.0 36.0 36.0 36.0 12 35.00896420912412 36.0 36.0 36.0 36.0 36.0 13 35.04955412229742 36.0 36.0 36.0 36.0 36.0 14 35.00897064430655 36.0 36.0 36.0 36.0 36.0 15 34.950492532775186 36.0 36.0 36.0 36.0 36.0 16 34.98370933568003 36.0 36.0 36.0 36.0 36.0 17 34.965361021778264 36.0 36.0 36.0 36.0 36.0 18 34.96230994090894 36.0 36.0 36.0 36.0 36.0 19 34.9533642329343 36.0 36.0 36.0 32.0 36.0 20 34.95764443364764 36.0 36.0 36.0 32.0 36.0 21 34.951100657514765 36.0 36.0 36.0 32.0 36.0 22 34.92670327212939 36.0 36.0 36.0 32.0 36.0 23 34.8903002495242 36.0 36.0 36.0 32.0 36.0 24 34.880925797520206 36.0 36.0 36.0 32.0 36.0 25 34.87038496870088 36.0 36.0 36.0 32.0 36.0 26 34.81681931455655 36.0 36.0 36.0 32.0 36.0 27 34.8019146276523 36.0 36.0 36.0 32.0 36.0 28 34.77689544276468 36.0 36.0 36.0 32.0 36.0 29 34.76209934956393 36.0 36.0 36.0 32.0 36.0 30 34.74073695709181 36.0 36.0 36.0 32.0 36.0 31 34.742769670341694 36.0 36.0 36.0 32.0 36.0 32 34.69945526180735 36.0 36.0 36.0 32.0 36.0 33 34.67632158537155 36.0 36.0 36.0 32.0 36.0 34 34.67541100705779 36.0 36.0 36.0 32.0 36.0 35 34.66235241311297 36.0 36.0 36.0 32.0 36.0 36 34.63177483940198 36.0 36.0 36.0 32.0 36.0 37 34.6274198296929 36.0 36.0 36.0 32.0 36.0 38 34.6216378182801 36.0 36.0 36.0 32.0 36.0 39 34.58717661197298 36.0 36.0 36.0 32.0 36.0 40 34.581677748587076 36.0 36.0 36.0 32.0 36.0 41 34.55404185764411 36.0 36.0 36.0 32.0 36.0 42 34.54157771367621 36.0 36.0 36.0 32.0 36.0 43 34.52021210361287 36.0 36.0 36.0 32.0 36.0 44 34.4912384991224 36.0 36.0 36.0 32.0 36.0 45 34.46988817261733 36.0 36.0 36.0 32.0 36.0 46 34.46187234850374 36.0 36.0 36.0 32.0 36.0 47 34.42460942464643 36.0 36.0 36.0 32.0 36.0 48 34.407773378615566 36.0 36.0 36.0 32.0 36.0 49 34.386395702585176 36.0 36.0 36.0 32.0 36.0 50 33.91821607090284 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 7.0 21 22.0 22 63.0 23 200.0 24 569.0 25 1390.0 26 3061.0 27 6338.0 28 11125.0 29 18465.0 30 28657.0 31 44191.0 32 69644.0 33 121236.0 34 261434.0 35 676763.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.82711947867829 17.942198559590487 12.36006858479886 26.87061337693237 2 16.09605295123666 19.75792892963271 36.93868423127231 27.207333887858315 3 18.86484808118639 22.586480947002972 28.709727759169347 29.838943212641293 4 13.246179512631459 15.624059860066957 34.77821948154953 36.35154114575205 5 15.03178175722309 36.225250690575514 33.387817877902066 15.355149674299328 6 35.54460319733067 34.570876522931044 15.943296207573912 13.941224072164369 7 30.703703286608548 30.475254310365628 19.76888042304889 19.05216197997693 8 27.846482287964765 34.11426953439846 18.54217377244873 19.497074405188044 9 26.69112572255033 15.092192032278875 18.37003264246287 39.84664960270792 10 15.717581457605686 27.741597635706366 32.05720573827063 24.483615168417312 11 36.97583428118208 21.65953702080012 21.909946057083285 19.454682640934518 12 24.124372770812585 23.50739965539598 29.0599968145847 23.308230759206737 13 29.571996016622077 19.90570848945354 24.740541488425517 25.781754005498865 14 23.088549719023845 19.093990665767883 25.41993587340709 32.39752374180117 15 24.82476193847 27.289034610019904 22.159309376221678 25.726894075288413 16 25.314118858393126 26.461678303677726 23.33062518099038 24.89357765693877 17 24.00483925718689 26.40162295300869 25.23653317416982 24.357004615634597 18 24.219472073296785 26.26288545768261 25.3456299043168 24.172012564703802 19 25.167354963054013 25.580332795459338 25.31576635783154 23.936545883655118 20 25.387438202138735 25.326303969059644 25.152956242368273 24.133301586433348 21 25.20693133499468 25.066081279571673 25.29453025581459 24.432457129619053 22 25.197519880691715 25.02296555729484 25.18706270924398 24.59245185276946 23 24.67393735028146 25.03213569225671 25.33418706753563 24.959739889926205 24 24.628486483616722 25.208058830816356 25.180467808597136 24.982986876969782 25 24.83206144327011 25.063326369912875 25.320412528365143 24.78419965845187 26 24.643569612921908 25.31492326007915 25.305029119341032 24.7364780076579 27 24.722904397894723 25.653916662577636 25.1547061809272 24.46847275860044 28 25.055444144398514 25.12180819101262 25.137252914588267 24.685494750000604 29 24.639949805334794 25.41096882139065 25.30173107242833 24.64735030084623 30 25.00372037276124 25.530766477229307 24.97733589134098 24.48817725866847 31 24.88297994711876 25.097995998915668 25.18310149192021 24.83592256204536 32 24.653986058087547 25.587978358342223 25.15770320425883 24.6003323793114 33 24.623621662145943 25.52117017545553 25.036600158949263 24.818608003449263 34 24.676107140041733 25.429189210060187 25.18987932346492 24.704824326433165 35 24.698109018600924 25.36592114958284 25.443545662519185 24.492424169297053 36 24.993182712162444 25.356851836806598 25.15848685972797 24.49147859130299 37 25.01960752768181 25.058782362475817 25.191108036472016 24.730502073370364 38 24.83908021937537 25.38808172038167 25.0267462269721 24.74609183327086 39 24.847867164002615 25.389713447295875 25.025399044529372 24.737020344172137 40 24.822770911343227 25.519219089984034 25.012850265250393 24.645159733422354 41 24.89255126690161 25.097031655848728 25.257591394770223 24.75282568247944 42 24.73051503002143 25.39626357078043 25.142465039352853 24.73075635984529 43 24.755856232704808 25.058401441534205 25.37904627067379 24.806696055087198 44 24.66181864984877 25.340111976317655 25.206496557050002 24.791572816783578 45 24.41667967134889 25.293811969992163 25.468932752654162 24.820575606004784 46 24.758111743204285 25.23014376544481 25.066123095140032 24.945621396210875 47 24.51343244202013 25.442284782089324 25.411395434329165 24.63288734156138 48 24.594788744744058 25.436463341744986 25.237286594906195 24.731461318604765 49 24.623810052432503 25.199859708057616 25.30346981229517 24.872860427214707 50 24.304985761861094 25.418858696526534 25.409849252698812 24.86630628891356 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 18.0 1 22.5 2 27.0 3 60.5 4 94.0 5 102.0 6 110.0 7 90.5 8 71.0 9 107.5 10 144.0 11 236.0 12 328.0 13 607.5 14 887.0 15 1164.0 16 1441.0 17 1495.0 18 1549.0 19 1735.0 20 1921.0 21 2461.0 22 3001.0 23 3911.0 24 4821.0 25 6155.0 26 7489.0 27 9183.0 28 10877.0 29 13050.5 30 15224.0 31 18211.5 32 21199.0 33 24652.5 34 28106.0 35 32365.0 36 36624.0 37 40707.0 38 44790.0 39 50420.0 40 56050.0 41 62098.5 42 68147.0 43 72322.0 44 76497.0 45 81590.0 46 86683.0 47 88227.0 48 89771.0 49 92089.5 50 94408.0 51 96349.5 52 98291.0 53 97963.0 54 97635.0 55 94722.0 56 91809.0 57 86324.5 58 80840.0 59 75168.5 60 69497.0 61 60514.0 62 51531.0 63 43622.5 64 35714.0 65 30387.5 66 25061.0 67 21009.0 68 16957.0 69 13795.5 70 10634.0 71 8340.0 72 6046.0 73 4866.5 74 3687.0 75 3014.0 76 2341.0 77 1914.5 78 1488.0 79 1113.0 80 738.0 81 558.5 82 379.0 83 268.5 84 158.0 85 97.0 86 36.0 87 25.5 88 15.0 89 10.5 90 6.0 91 8.0 92 10.0 93 8.0 94 6.0 95 6.5 96 7.0 97 4.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0261429286193477 2 0.004826386822033421 3 1.6087956073444738E-4 4 0.0 5 0.0 6 3.2175912146889475E-4 7 0.0 8 0.0 9 0.0 10 3.2175912146889475E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.826386822033421E-4 17 0.0 18 8.043978036722369E-5 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 6.435182429377895E-4 25 2.4131934110167106E-4 26 4.826386822033421E-4 27 2.4131934110167106E-4 28 0.001850114948446145 29 4.826386822033421E-4 30 8.848375840394605E-4 31 2.4131934110167106E-4 32 6.435182429377895E-4 33 1.6087956073444738E-4 34 6.435182429377895E-4 35 1.6087956073444738E-4 36 2.4131934110167106E-4 37 0.0016892353877116975 38 0.0 39 7.239580233050131E-4 40 8.043978036722369E-5 41 0.0012065967055083552 42 0.0043437481398300795 43 0.00370022989689229 44 0.00370022989689229 45 0.0019305547288133685 46 0.0024131934110167104 47 0.00152835582697725 48 0.00394154923799396 49 0.003539350336157842 50 0.002091434289547816 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1243166.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.284095869371214 #Duplication Level Percentage of deduplicated Percentage of total 1 65.51122336755229 32.94172636333791 2 16.57202817289933 16.666189067919813 3 7.28802218998618 10.994148194981095 4 3.707630825481573 7.457394555070053 5 2.09073763022336 5.256542571792671 6 1.322229809086346 3.989227828886292 7 0.868140893589366 3.0557575944958484 8 0.5705824257422104 2.2952977117919753 9 0.4038150836419216 1.8274928741413683 >10 1.6096127289672482 12.942442169174312 >50 0.04184747646783452 1.3841269735204789 >100 0.01380827587699016 1.1056076416058296 >500 3.211204853770606E-4 0.08404645328242107 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 1.6087956073444738E-4 0.0 21 0.0 0.0 0.0 1.6087956073444738E-4 0.0 22 0.0 0.0 0.0 3.2175912146889475E-4 0.0 23 0.0 0.0 0.0 3.2175912146889475E-4 0.0 24 0.0 0.0 0.0 8.848375840394605E-4 0.0 25 0.0 0.0 0.0 0.0012065967055083552 0.0 26 0.0 0.0 0.0 0.0016087956073444736 0.0 27 0.0 0.0 0.0 0.002252313850282263 0.0 28 0.0 0.0 0.0 0.0037002298968922894 0.0 29 0.0 0.0 0.0 0.005711224406072882 0.0 30 0.0 0.0 0.0 0.008204857597456816 0.0 31 0.0 0.0 0.0 0.016248835634179185 0.0 32 0.0 0.0 0.0 0.02485589213347212 0.0 33 0.0 0.0 0.0 0.03402602709533562 0.0 34 0.0 0.0 0.0 0.042793963155363 0.0 35 0.0 0.0 0.0 0.054779490430079326 0.0 36 0.0 0.0 0.0 0.07038480782132073 0.0 37 0.0 0.0 0.0 0.09403410324928449 0.0 38 0.0 0.0 0.0 0.12862320880719066 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 800 0.0 28.335592 1 GTATAGG 130 6.730261E-11 22.008228 1 GGTATCA 400 0.0 22.008226 1 GACTAAT 60 0.007396247 18.34019 1 TATCAAC 1275 0.0 17.946754 2 CAACGCA 1250 0.0 17.423506 5 TCAACGC 1260 0.0 17.285225 4 ATCAACG 1315 0.0 16.896858 3 CCTATAC 105 3.7754005E-5 16.761429 3 AACGCAG 1295 0.0 16.648176 6 GTAGGAC 225 1.8189894E-12 16.621752 3 CCCCTAC 225 2.5465852E-11 15.650295 1 GTATTAT 155 2.6561065E-7 15.618743 1 GCCGTAC 85 0.002972586 15.53522 1 TAGGACT 335 0.0 15.104049 4 CCCTATA 90 0.0043564257 14.668022 2 TAGTACT 135 1.9565829E-5 14.666252 4 TATAATA 230 5.9299055E-10 14.349151 2 TTAATAC 185 1.265962E-7 14.269866 3 ATAGAAC 140 2.7574999E-5 14.142456 3 >>END_MODULE