##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062303_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 765241 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16955834828505 32.0 32.0 32.0 32.0 32.0 2 31.420591682881604 32.0 32.0 32.0 32.0 32.0 3 31.54701982774054 32.0 32.0 32.0 32.0 32.0 4 31.65471400513041 32.0 32.0 32.0 32.0 32.0 5 31.63533187584042 32.0 32.0 32.0 32.0 32.0 6 35.26020560842924 36.0 36.0 36.0 36.0 36.0 7 35.24954752816433 36.0 36.0 36.0 36.0 36.0 8 35.20601614393374 36.0 36.0 36.0 36.0 36.0 9 35.24658244918921 36.0 36.0 36.0 36.0 36.0 10 35.156698347318034 36.0 36.0 36.0 36.0 36.0 11 35.27879452355533 36.0 36.0 36.0 36.0 36.0 12 35.18791727050694 36.0 36.0 36.0 36.0 36.0 13 35.232207892676946 36.0 36.0 36.0 36.0 36.0 14 35.19038969422705 36.0 36.0 36.0 36.0 36.0 15 35.1888084930107 36.0 36.0 36.0 36.0 36.0 16 35.18502145075865 36.0 36.0 36.0 36.0 36.0 17 35.167110753344375 36.0 36.0 36.0 36.0 36.0 18 35.16901864902691 36.0 36.0 36.0 36.0 36.0 19 35.142054594565636 36.0 36.0 36.0 36.0 36.0 20 35.124575133846726 36.0 36.0 36.0 36.0 36.0 21 35.10195480900788 36.0 36.0 36.0 36.0 36.0 22 35.108375008657404 36.0 36.0 36.0 36.0 36.0 23 35.0913882031935 36.0 36.0 36.0 36.0 36.0 24 35.0773599428154 36.0 36.0 36.0 36.0 36.0 25 35.06016405289314 36.0 36.0 36.0 36.0 36.0 26 35.02766710095251 36.0 36.0 36.0 36.0 36.0 27 35.01872874035761 36.0 36.0 36.0 36.0 36.0 28 34.993274014330126 36.0 36.0 36.0 36.0 36.0 29 34.97443419785401 36.0 36.0 36.0 36.0 36.0 30 34.94532310736095 36.0 36.0 36.0 36.0 36.0 31 34.94788177842013 36.0 36.0 36.0 36.0 36.0 32 34.90625698309422 36.0 36.0 36.0 32.0 36.0 33 34.8740004782807 36.0 36.0 36.0 32.0 36.0 34 34.85427597319015 36.0 36.0 36.0 32.0 36.0 35 34.83913041773768 36.0 36.0 36.0 32.0 36.0 36 34.81208534304879 36.0 36.0 36.0 32.0 36.0 37 34.78646596301034 36.0 36.0 36.0 32.0 36.0 38 34.76106481487531 36.0 36.0 36.0 32.0 36.0 39 34.732858014664664 36.0 36.0 36.0 32.0 36.0 40 34.70743857163952 36.0 36.0 36.0 32.0 36.0 41 34.67683122049132 36.0 36.0 36.0 32.0 36.0 42 34.63025504383587 36.0 36.0 36.0 32.0 36.0 43 34.61453711967864 36.0 36.0 36.0 32.0 36.0 44 34.54286166057491 36.0 36.0 36.0 32.0 36.0 45 34.502318877321 36.0 36.0 36.0 32.0 36.0 46 34.43241018189041 36.0 36.0 36.0 32.0 36.0 47 34.37713086465571 36.0 36.0 36.0 32.0 36.0 48 34.317571849913946 36.0 36.0 36.0 32.0 36.0 49 34.277342693347585 36.0 36.0 36.0 32.0 36.0 50 33.88209466037497 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 8.0 21 32.0 22 98.0 23 238.0 24 581.0 25 1241.0 26 2566.0 27 4713.0 28 7731.0 29 11617.0 30 16428.0 31 23151.0 32 33212.0 33 53478.0 34 115726.0 35 494419.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.58225055032392 17.935461775363265 11.962290393252847 25.51999728105997 2 16.286433809163487 20.27381470460239 37.24896724861439 26.190784237619724 3 19.23226700120224 24.158695311274894 28.08582928231666 28.52320840520621 4 12.862091811599221 15.727071602279544 34.6919467200529 36.71888986606834 5 14.626241929013212 36.60324002503786 32.24069280135278 16.529825244596147 6 34.44984580001045 34.66847002247661 16.448695833986722 14.432988343526215 7 30.59402201397991 30.44191307052288 19.56952123579369 19.394543679703517 8 28.518336053609257 32.387835988923754 18.747165925505822 20.346662031961174 9 27.728911545513114 14.27001428308206 18.43053364887663 39.5705405225282 10 17.154203708374226 26.15136930718558 29.958405260564973 26.736021723875226 11 37.098116802419106 21.30518359575611 21.995554341704114 19.601145260120667 12 25.84270837553137 23.462543172673705 27.676640430923065 23.018108020871857 13 29.83922711929967 19.546260589801122 25.123849872131785 25.490662418767425 14 24.199304532820378 19.44903631666364 25.07510705777657 31.27655209273941 15 25.373836477658674 26.720340389498208 22.645284296058364 25.26053883678475 16 25.63003521793959 25.791423549628544 23.76446451090188 24.814076721529986 17 23.83523621970072 25.703667210721854 25.070925368609366 25.39017120096806 18 24.433150950226008 24.543835324650207 26.937597273531537 24.08541645159225 19 25.729672090230398 24.02524172123553 26.286620816187316 23.95846537234675 20 26.06444008269323 23.477140445194827 25.851434455685684 24.60698501642626 21 26.90420403506869 23.271753604420045 25.444271804568757 24.379770555942507 22 26.301779439418432 23.61047042696353 25.80794808432899 24.27980204928905 23 24.49986344171313 23.76179530370171 26.637098639513564 25.10124261507159 24 24.785001247979384 24.17865314928578 26.39848831146429 24.63785729127055 25 24.744066551844 23.955030983824642 26.46509974674546 24.8358027175859 26 24.131708043772 25.12865278514658 26.74775690700148 23.991882264079933 27 24.923291638135165 24.379015101223676 26.034974831293876 24.662718429347287 28 24.366262339556364 24.341563624673622 26.34046067677092 24.95171335899909 29 24.251500527291757 24.473917026361974 26.424047117798416 24.850535328547853 30 24.190473203516323 24.650595702474153 26.600725793910595 24.558205300098923 31 24.945049488130426 24.302239576391013 25.78714484719707 24.965566088281495 32 24.69293585858388 24.518870772355015 25.625595408445296 25.162597960615813 33 24.326747164288328 24.2420678479954 26.413935497360306 25.01724949035597 34 24.918064492522568 24.358890590615182 26.471441489945587 24.251603426916663 35 25.274129326578166 24.323187074398785 26.430235703523465 23.972447895499588 36 24.209137002770373 24.95556949453766 26.039804505775965 24.795488996916003 37 25.107484024410958 24.74902970348784 25.7165819426839 24.426904329417297 38 24.394537145814194 24.66425609709882 26.064076545820207 24.877130211266778 39 25.268708305291838 24.47248230935595 25.461328872829913 24.797480512522295 40 25.288373205303948 24.8166263961288 25.825066874357226 24.06993352421002 41 24.36823246222724 25.068018410054965 26.347365642404807 24.21638348531299 42 25.43838097652646 25.260650128985553 25.534956782653467 23.766012111834524 43 24.799273411567917 24.56077990643214 25.866548182222104 24.77339849977784 44 24.35887048295113 25.22516635912662 25.50770244063083 24.908260717291416 45 24.56597732692999 25.35829331242445 25.423372210787676 24.652357149857885 46 24.397957210138678 25.037374481853774 25.341336176930273 25.223332131077274 47 24.85981430540945 24.992976013904226 25.573581971551224 24.573627709135103 48 25.285707004771258 25.67057018558377 24.454690038120404 24.58903277152457 49 24.877354570094116 25.688369528001314 24.501642677734594 24.93263322416997 50 24.838673423782502 25.973905475302463 24.479690754791445 24.707730346123586 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 487.0 1 301.0 2 115.0 3 259.0 4 403.0 5 391.5 6 380.0 7 316.0 8 252.0 9 373.0 10 494.0 11 771.5 12 1049.0 13 1886.5 14 2724.0 15 3679.0 16 4634.0 17 4883.0 18 5132.0 19 4802.0 20 4472.0 21 4429.0 22 4386.0 23 4007.5 24 3629.0 25 3686.5 26 3744.0 27 4641.0 28 5538.0 29 6944.0 30 8350.0 31 10134.0 32 11918.0 33 14125.5 34 16333.0 35 18358.0 36 20383.0 37 23417.5 38 26452.0 39 28435.5 40 30419.0 41 32675.5 42 34932.0 43 36211.0 44 37490.0 45 41901.0 46 46312.0 47 49239.0 48 52166.0 49 54884.0 50 57602.0 51 56529.0 52 55456.0 53 55983.0 54 56510.0 55 56798.5 56 57087.0 57 55475.5 58 53864.0 59 49542.0 60 45220.0 61 40331.5 62 35443.0 63 30508.5 64 25574.0 65 21731.0 66 17888.0 67 15367.5 68 12847.0 69 11356.0 70 9865.0 71 7659.0 72 5453.0 73 4753.0 74 4053.0 75 3024.0 76 1995.0 77 1799.0 78 1603.0 79 1347.0 80 1091.0 81 880.0 82 669.0 83 578.5 84 488.0 85 358.0 86 228.0 87 145.5 88 63.0 89 42.5 90 22.0 91 15.0 92 8.0 93 8.0 94 8.0 95 6.5 96 5.0 97 4.0 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03097063539460118 2 0.006795244896705743 3 1.3067778647511046E-4 4 0.0 5 0.0 6 1.3067778647511046E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.840667188506627E-4 17 0.0 18 2.613555729502209E-4 19 0.0 20 3.9203335942533137E-4 21 0.0 22 0.0 23 0.0 24 5.227111459004418E-4 25 3.9203335942533137E-4 26 3.9203335942533137E-4 27 6.533889323755523E-4 28 0.0024828779430270988 29 0.0013067778647511046 30 0.0013067778647511046 31 9.147445053257732E-4 32 0.0013067778647511046 33 1.3067778647511046E-4 34 6.533889323755523E-4 35 0.0 36 1.3067778647511046E-4 37 0.001437455651226215 38 0.0 39 7.840667188506627E-4 40 0.0 41 9.147445053257732E-4 42 0.0050964336725293075 43 0.0027442335159773195 44 0.003789655807778203 45 0.0020908445836017673 46 0.0016988112241764358 47 7.840667188506627E-4 48 0.004443044740153755 49 0.0035283002348279824 50 0.0030055890889275406 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 765241.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.76618632095675 #Duplication Level Percentage of deduplicated Percentage of total 1 73.76175593853806 41.13411825029451 2 15.471446285875762 17.255671124656438 3 5.133839326600423 8.58883921287163 4 2.1840627117847733 4.871873924881749 5 1.0883032997168294 3.0345262292860373 6 0.6107789372131289 2.0436487208125973 7 0.3675220604008434 1.4346712588162749 8 0.23921354500920272 1.0672021697183816 9 0.1840162354856045 0.9235695306754147 >10 0.8126588691566756 8.089052721068196 >50 0.07768831242924615 3.066897323807234 >100 0.06470022994732963 6.9185689774740835 >500 0.003778115616106756 1.3788415635699447 >1k 2.3613222600667226E-4 0.19251899206754458 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1462 0.19105092382661149 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 908 0.11865543011940029 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 866 0.11316696308744564 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 797 0.10415019582066304 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 792 0.10349680688828747 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 791 0.10336612910181237 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.3067778647511046E-4 7 0.0 0.0 0.0 0.0 1.3067778647511046E-4 8 0.0 0.0 0.0 0.0 1.3067778647511046E-4 9 0.0 0.0 0.0 0.0 1.3067778647511046E-4 10 0.0 0.0 0.0 0.0 1.3067778647511046E-4 11 0.0 0.0 0.0 0.0 1.3067778647511046E-4 12 0.0 0.0 0.0 0.0 5.227111459004418E-4 13 0.0 0.0 0.0 0.0 7.840667188506627E-4 14 0.0 0.0 0.0 0.0 7.840667188506627E-4 15 0.0 0.0 0.0 0.0 9.147445053257732E-4 16 0.0 0.0 0.0 0.0 0.0010454222918008836 17 0.0 0.0 0.0 0.0 0.0010454222918008836 18 0.0 0.0 0.0 1.3067778647511046E-4 0.0010454222918008836 19 0.0 0.0 0.0 1.3067778647511046E-4 0.0010454222918008836 20 0.0 0.0 0.0 1.3067778647511046E-4 0.0010454222918008836 21 0.0 0.0 0.0 3.9203335942533137E-4 0.0013067778647511046 22 0.0 0.0 0.0 6.533889323755523E-4 0.001437455651226215 23 0.0 0.0 0.0 0.0024828779430270988 0.001437455651226215 24 0.0 0.0 0.0 0.004573722526628866 0.001437455651226215 25 0.0 0.0 0.0 0.005227111459004418 0.001437455651226215 26 0.0 0.0 0.0 0.006011178177855081 0.0015681334377013255 27 0.0 0.0 0.0 0.007056600469655965 0.0015681334377013255 28 0.0 0.0 0.0 0.008494056120882179 0.0015681334377013255 29 0.0 0.0 0.0 0.012153034142185272 0.0015681334377013255 30 0.0 0.0 0.0 0.018948279038891017 0.0015681334377013255 31 0.0 0.0 0.0 0.03554435792123004 0.0015681334377013255 32 0.0 0.0 0.0 0.05266314794946951 0.0015681334377013255 33 0.0 0.0 0.0 0.0687365156859081 0.0015681334377013255 34 0.0 0.0 0.0 0.08428717227644625 0.001960166797126657 35 0.0 0.0 0.0 0.10571832925836436 0.001960166797126657 36 0.0 0.0 0.0 0.132507275485762 0.001960166797126657 37 0.0 0.0 0.0 0.1709265447094445 0.001960166797126657 38 0.0 0.0 0.0 0.22215223700768777 0.001960166797126657 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCTAGAC 30 0.005745465 29.331503 3 TAGGACG 215 0.0 24.556608 4 CGTCTTA 60 2.8701176E-4 22.001501 15 CGTATAT 70 3.2149124E-5 21.998629 10 TATACTC 50 0.0025805144 21.998629 5 AGGACGT 245 0.0 21.549675 5 CGCGGGA 160 1.8189894E-12 20.625061 44 TTAGGAC 185 0.0 20.214956 3 GTAAACG 175 0.0 20.114346 27 GTATCAA 2690 0.0 19.551638 1 TGTAGGA 380 0.0 19.10657 2 GTATTAA 105 1.7864077E-6 18.86213 1 TTCGGGC 175 9.094947E-12 18.855967 35 ATACACT 250 0.0 18.478848 4 GATATAC 155 7.166818E-10 18.456493 1 GATTAAT 215 0.0 18.419863 38 GGACGTG 275 0.0 18.398853 6 AGTGCGT 60 0.0074123465 18.33219 6 TAGGACC 470 0.0 18.254179 4 GTAGGAC 350 0.0 18.227434 3 >>END_MODULE