##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062298_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 683210 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24183486775662 32.0 32.0 32.0 32.0 32.0 2 31.430381581065852 32.0 32.0 32.0 32.0 32.0 3 31.562683508730846 32.0 32.0 32.0 32.0 32.0 4 31.63973156130619 32.0 32.0 32.0 32.0 32.0 5 31.619655742743813 32.0 32.0 32.0 32.0 32.0 6 35.25974590535853 36.0 36.0 36.0 36.0 36.0 7 35.25645994642935 36.0 36.0 36.0 36.0 36.0 8 35.20854056585823 36.0 36.0 36.0 36.0 36.0 9 35.282415362772795 36.0 36.0 36.0 36.0 36.0 10 35.17665578665417 36.0 36.0 36.0 36.0 36.0 11 35.28814127427877 36.0 36.0 36.0 36.0 36.0 12 35.20912164634593 36.0 36.0 36.0 36.0 36.0 13 35.24539599830213 36.0 36.0 36.0 36.0 36.0 14 35.20904407136898 36.0 36.0 36.0 36.0 36.0 15 35.19650766235857 36.0 36.0 36.0 36.0 36.0 16 35.20017417777843 36.0 36.0 36.0 36.0 36.0 17 35.184318145226214 36.0 36.0 36.0 36.0 36.0 18 35.17498280177398 36.0 36.0 36.0 36.0 36.0 19 35.156773173694766 36.0 36.0 36.0 36.0 36.0 20 35.16116713748335 36.0 36.0 36.0 36.0 36.0 21 35.160413342896035 36.0 36.0 36.0 36.0 36.0 22 35.14302044759298 36.0 36.0 36.0 36.0 36.0 23 35.106036211413766 36.0 36.0 36.0 36.0 36.0 24 35.09299922425023 36.0 36.0 36.0 36.0 36.0 25 35.08294375082332 36.0 36.0 36.0 36.0 36.0 26 35.03255660777799 36.0 36.0 36.0 36.0 36.0 27 35.02148241389909 36.0 36.0 36.0 36.0 36.0 28 35.01056776101052 36.0 36.0 36.0 36.0 36.0 29 34.98721183823422 36.0 36.0 36.0 36.0 36.0 30 34.95747134848729 36.0 36.0 36.0 36.0 36.0 31 34.9677536921298 36.0 36.0 36.0 36.0 36.0 32 34.93492044905666 36.0 36.0 36.0 36.0 36.0 33 34.91651761537448 36.0 36.0 36.0 32.0 36.0 34 34.8997306830989 36.0 36.0 36.0 32.0 36.0 35 34.88775486307285 36.0 36.0 36.0 32.0 36.0 36 34.86771710015954 36.0 36.0 36.0 32.0 36.0 37 34.845719471319214 36.0 36.0 36.0 32.0 36.0 38 34.83284787986124 36.0 36.0 36.0 32.0 36.0 39 34.808080970711785 36.0 36.0 36.0 32.0 36.0 40 34.79823333967594 36.0 36.0 36.0 32.0 36.0 41 34.765670877182714 36.0 36.0 36.0 32.0 36.0 42 34.745516019964576 36.0 36.0 36.0 32.0 36.0 43 34.73046793811566 36.0 36.0 36.0 32.0 36.0 44 34.692336177749155 36.0 36.0 36.0 32.0 36.0 45 34.66477510575079 36.0 36.0 36.0 32.0 36.0 46 34.646138083458965 36.0 36.0 36.0 32.0 36.0 47 34.617619765518654 36.0 36.0 36.0 32.0 36.0 48 34.5885847689583 36.0 36.0 36.0 32.0 36.0 49 34.56978381463971 36.0 36.0 36.0 32.0 36.0 50 34.17282533920756 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 10.0 21 12.0 22 52.0 23 169.0 24 341.0 25 823.0 26 1764.0 27 3076.0 28 5634.0 29 8893.0 30 13278.0 31 19475.0 32 28765.0 33 49219.0 34 110635.0 35 441059.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.87834881889072 17.827766243729886 11.842717883695801 26.451167053683587 2 16.109375777606683 19.8881417359255 37.303311250523286 26.69917123594453 3 18.54296202620578 23.33066943010035 28.667550731256075 29.458817812437793 4 12.652917843708378 15.876231319799183 35.252265042958975 36.218585793533464 5 14.354005357064445 36.83274542234452 33.31552524114109 15.497723979449948 6 34.800478330935334 34.91815827953086 16.43420973669843 13.84715365283537 7 30.520045081307355 30.22043002883447 20.267414118645803 18.992110771212364 8 27.942653064211587 33.58762313197992 19.20536877387626 19.264355029932233 9 27.16207315466694 14.290920800339574 18.666588603796782 39.880417441196705 10 16.26105627999631 27.04399385839472 31.573208198369752 25.121741663239217 11 37.175978103365 21.204607660894894 21.95942682337788 19.65998741236223 12 24.233398223093925 23.740138464015455 28.965471816864508 23.060991496026112 13 29.75380922410386 19.601293892068323 25.061694061855068 25.583202821972744 14 23.257856296014403 19.44921766367588 25.524802037440903 31.76812400286881 15 24.868195723130516 27.261456945887797 22.43819616223416 25.43215116874753 16 25.41473581906482 25.913267740622885 23.93055681595302 24.74143962435927 17 23.776437698511437 26.17994467294097 25.508701570527364 24.53491605802023 18 24.562433219654277 25.339939403697255 26.233515317398748 23.864112059249717 19 25.220210477012923 25.074867171147964 25.865253728721772 23.839668623117344 20 25.483087191346733 24.656694135039007 25.455570029712682 24.404648643901584 21 26.01528080677976 24.461000278098975 25.107799944380204 24.41591897074106 22 25.47620790093822 24.50813073579134 25.44781253201797 24.56784883125247 23 24.424847411484023 24.580875572664336 25.690051375126245 25.3042256407254 24 24.586322326811583 24.773382942940657 25.892233764294843 24.74806096595292 25 24.800207257526257 24.498103066708822 25.837958571913678 24.863731103851244 26 24.43347979965047 25.14556370992058 26.020848763037797 24.400107727391152 27 24.75238104995997 25.01481981302885 25.453779015730227 24.779020121280958 28 24.584124344808306 24.977715066079035 25.76416465528976 24.673995933822894 29 24.502640484303463 25.135390686291732 25.666414913174318 24.69555391623049 30 24.396666295864776 25.09440811236468 25.862553497930342 24.6463720938402 31 24.9134963290828 24.79801173288369 25.467793117176612 24.820698820856897 32 24.693833640463286 25.082734808045 25.203049734560683 25.02038181693103 33 24.40508774754468 24.875514117182128 25.592570366358807 25.12682776891439 34 24.7948630126961 24.951478479278457 25.93581400522832 24.317844502797122 35 25.145746030863176 24.86632933699644 25.75434457098779 24.23358006115259 36 24.43849539452788 25.219954655164084 25.59641339619355 24.74513655411448 37 24.99436470460806 25.12609888260143 25.39717854665 24.48235786614051 38 24.62932334128599 24.99216931836478 25.578958153422814 24.79954918692642 39 24.990083474457812 24.820002254088465 25.351323106016803 24.83859116543692 40 25.122912608001357 24.979471874638655 25.474927877121058 24.422687640238934 41 24.28560764516549 25.22734824056686 25.858785748891616 24.62825836537603 42 25.137079941098804 25.227685903234587 25.677934593912568 23.957299561754038 43 24.91663958734034 24.65784905251633 25.639145288636346 24.786366071506986 44 24.301248713741412 25.359530316181754 25.466968586747623 24.87225238332921 45 24.626495372450748 25.395094490413367 25.275947721793756 24.702462415342122 46 24.52798704900972 25.170559916626534 25.49492016141899 24.806532872944757 47 24.68106158629048 25.1310004039789 25.71530611647473 24.472631893255894 48 25.049840597911526 25.49042855595467 25.005342677896536 24.45438816823727 49 24.681896224909945 25.52690397532747 25.090860654957854 24.70033914480473 50 24.77550333360168 25.661487569434787 24.951002276070522 24.612006820893008 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 553.0 1 306.5 2 60.0 3 154.5 4 249.0 5 266.5 6 284.0 7 201.0 8 118.0 9 187.0 10 256.0 11 431.0 12 606.0 13 1018.5 14 1431.0 15 1702.5 16 1974.0 17 1907.5 18 1841.0 19 1783.5 20 1726.0 21 1927.0 22 2128.0 23 2569.0 24 3010.0 25 3714.5 26 4419.0 27 5459.0 28 6499.0 29 7616.5 30 8734.0 31 10259.0 32 11784.0 33 13413.5 34 15043.0 35 17031.0 36 19019.0 37 21831.5 38 24644.0 39 26992.0 40 29340.0 41 32223.0 42 35106.0 43 36975.5 44 38845.0 45 42009.5 46 45174.0 47 47417.0 48 49660.0 49 51325.5 50 52991.0 51 52545.5 52 52100.0 53 51341.0 54 50582.0 55 50102.0 56 49622.0 57 47775.0 58 45928.0 59 41770.0 60 37612.0 61 33136.0 62 28660.0 63 24670.0 64 20680.0 65 17567.5 66 14455.0 67 12110.0 68 9765.0 69 8463.5 70 7162.0 71 5625.0 72 4088.0 73 3524.5 74 2961.0 75 2219.0 76 1477.0 77 1288.0 78 1099.0 79 878.0 80 657.0 81 521.5 82 386.0 83 310.5 84 235.0 85 190.5 86 146.0 87 94.5 88 43.0 89 32.5 90 22.0 91 16.5 92 11.0 93 10.5 94 10.0 95 6.5 96 3.0 97 5.5 98 8.0 99 6.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030444519254694748 2 0.0035128291447724712 3 2.927357620643726E-4 4 0.0 5 0.0 6 1.463678810321863E-4 7 0.0 8 0.0 9 0.0 10 1.463678810321863E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.854715241287452E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0013173109292896766 25 2.927357620643726E-4 26 5.854715241287452E-4 27 4.391036430965589E-4 28 0.0019027824534184217 29 2.927357620643726E-4 30 8.782072861931178E-4 31 2.927357620643726E-4 32 4.391036430965589E-4 33 0.0 34 0.0011709430482574905 35 1.463678810321863E-4 36 1.463678810321863E-4 37 0.002341886096514981 38 0.0 39 0.0010245751672253041 40 1.463678810321863E-4 41 0.0010245751672253041 42 0.004683772193029962 43 0.004683772193029962 44 0.0039519327878690304 45 0.0027809897396115398 46 0.0027809897396115398 47 8.782072861931178E-4 48 0.004683772193029962 49 0.003073725501675912 50 0.0021955182154827944 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 683210.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.27489843848662 #Duplication Level Percentage of deduplicated Percentage of total 1 80.37482978044261 53.26833680709484 2 12.828948812313982 17.00474559217305 3 3.3236132611649207 6.6081639399753715 4 1.2810312205924972 3.3960085616519318 5 0.6166316717984865 2.0433600711199453 6 0.35184017457532357 1.3990903101935384 7 0.23509633373980923 1.0906689949306487 8 0.16506716750459535 0.8751847809516572 9 0.12190033163419878 0.7271038888806927 >10 0.6225244068366181 7.480949918864333 >50 0.047021552617902605 2.1470427944487036 >100 0.031051691190665268 3.763839310153416 >500 4.4359558835067577E-4 0.19550502956191665 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 791 0.11577699389645937 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.463678810321863E-4 0.0 11 0.0 0.0 0.0 1.463678810321863E-4 0.0 12 0.0 0.0 0.0 1.463678810321863E-4 2.927357620643726E-4 13 0.0 0.0 0.0 1.463678810321863E-4 2.927357620643726E-4 14 0.0 0.0 0.0 1.463678810321863E-4 2.927357620643726E-4 15 0.0 0.0 0.0 2.927357620643726E-4 4.391036430965589E-4 16 0.0 0.0 0.0 2.927357620643726E-4 4.391036430965589E-4 17 0.0 0.0 0.0 2.927357620643726E-4 4.391036430965589E-4 18 0.0 0.0 0.0 2.927357620643726E-4 5.854715241287452E-4 19 0.0 0.0 0.0 2.927357620643726E-4 5.854715241287452E-4 20 0.0 0.0 0.0 2.927357620643726E-4 5.854715241287452E-4 21 0.0 0.0 0.0 2.927357620643726E-4 7.318394051609315E-4 22 0.0 0.0 0.0 5.854715241287452E-4 7.318394051609315E-4 23 0.0 0.0 0.0 0.0010245751672253041 7.318394051609315E-4 24 0.0 0.0 0.0 0.0011709430482574905 7.318394051609315E-4 25 0.0 0.0 0.0 0.0016100466913540493 7.318394051609315E-4 26 0.0 0.0 0.0 0.0020491503344506083 0.0011709430482574905 27 0.0 0.0 0.0 0.002341886096514981 0.0011709430482574905 28 0.0 0.0 0.0 0.004098300668901217 0.0011709430482574905 29 0.0 0.0 0.0 0.007903865575738061 0.0011709430482574905 30 0.0 0.0 0.0 0.01507589174631519 0.0011709430482574905 31 0.0 0.0 0.0 0.025028907656503858 0.0011709430482574905 32 0.0 0.0 0.0 0.03776291330630407 0.0011709430482574905 33 0.0 0.0 0.0 0.05210696564745832 0.0011709430482574905 34 0.0 0.0 0.0 0.06249908520074355 0.0013173109292896766 35 0.0 0.0 0.0 0.07874591999531623 0.0013173109292896766 36 0.0 0.0 0.0 0.0971882730053717 0.0013173109292896766 37 0.0 0.0 0.0 0.12982831047554924 0.001463678810321863 38 0.0 0.0 0.0 0.17637329664378448 0.001463678810321863 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACTAGC 30 0.005742167 29.334505 31 CGGATCG 45 4.067907E-5 29.33236 26 TAGGACG 95 3.274181E-11 27.78855 4 ATCGATT 50 8.333953E-5 26.401054 29 TCGTCTA 45 0.0013978629 24.443632 9 GTATCAA 990 0.0 22.004099 1 GGTATCA 615 0.0 21.109623 1 AACGCTT 105 7.730523E-8 20.953217 30 TCGATTT 65 4.927818E-4 20.308502 30 GTATAGG 100 1.1199681E-6 19.80369 1 AACCGCG 90 1.0005697E-5 19.556337 41 TTCGTTA 70 8.116208E-4 18.857895 40 CGATTTT 70 8.116208E-4 18.857895 31 CCCTCGG 70 8.120203E-4 18.856514 22 GGATCGA 70 8.120203E-4 18.856514 27 GTGTAAG 130 3.572859E-8 18.618853 1 TAAACGC 125 4.842823E-7 17.600704 28 CCTATTC 175 1.9099389E-10 17.599415 3 CGAGCCG 215 0.0 17.39477 15 CGCGGGA 115 4.2657703E-6 17.218079 44 >>END_MODULE