##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062296_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1197297 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.229733307608722 32.0 32.0 32.0 32.0 32.0 2 31.384834339349386 32.0 32.0 32.0 32.0 32.0 3 31.53419243512679 32.0 32.0 32.0 32.0 32.0 4 31.621386339396157 32.0 32.0 32.0 32.0 32.0 5 31.597685453149886 32.0 32.0 32.0 32.0 32.0 6 35.22470949146285 36.0 36.0 36.0 36.0 36.0 7 35.23604335432228 36.0 36.0 36.0 36.0 36.0 8 35.18343318324526 36.0 36.0 36.0 36.0 36.0 9 35.27875289088672 36.0 36.0 36.0 36.0 36.0 10 35.14589696624981 36.0 36.0 36.0 36.0 36.0 11 35.275475508583085 36.0 36.0 36.0 36.0 36.0 12 35.19466765556082 36.0 36.0 36.0 36.0 36.0 13 35.23182134424458 36.0 36.0 36.0 36.0 36.0 14 35.19921205849509 36.0 36.0 36.0 36.0 36.0 15 35.17497078836747 36.0 36.0 36.0 36.0 36.0 16 35.19210605221595 36.0 36.0 36.0 36.0 36.0 17 35.17110959102044 36.0 36.0 36.0 36.0 36.0 18 35.16626785166922 36.0 36.0 36.0 36.0 36.0 19 35.15994026544792 36.0 36.0 36.0 36.0 36.0 20 35.165549567066485 36.0 36.0 36.0 36.0 36.0 21 35.14939985651012 36.0 36.0 36.0 36.0 36.0 22 35.13683655767951 36.0 36.0 36.0 36.0 36.0 23 35.11321251118144 36.0 36.0 36.0 36.0 36.0 24 35.097173884174104 36.0 36.0 36.0 36.0 36.0 25 35.08139751456823 36.0 36.0 36.0 36.0 36.0 26 35.038835810997604 36.0 36.0 36.0 36.0 36.0 27 35.021091675666106 36.0 36.0 36.0 36.0 36.0 28 35.01140986739297 36.0 36.0 36.0 36.0 36.0 29 34.98608782950262 36.0 36.0 36.0 36.0 36.0 30 34.96374834314293 36.0 36.0 36.0 36.0 36.0 31 34.97111243075027 36.0 36.0 36.0 36.0 36.0 32 34.94429034734072 36.0 36.0 36.0 36.0 36.0 33 34.93744325760442 36.0 36.0 36.0 36.0 36.0 34 34.918195735895104 36.0 36.0 36.0 36.0 36.0 35 34.911614244418885 36.0 36.0 36.0 36.0 36.0 36 34.894965910713886 36.0 36.0 36.0 32.0 36.0 37 34.88458419256041 36.0 36.0 36.0 32.0 36.0 38 34.87269491195585 36.0 36.0 36.0 32.0 36.0 39 34.85395436554172 36.0 36.0 36.0 32.0 36.0 40 34.852065109993596 36.0 36.0 36.0 32.0 36.0 41 34.81921027113573 36.0 36.0 36.0 32.0 36.0 42 34.8074997264672 36.0 36.0 36.0 32.0 36.0 43 34.786838186348085 36.0 36.0 36.0 32.0 36.0 44 34.75109266957154 36.0 36.0 36.0 32.0 36.0 45 34.74138246400016 36.0 36.0 36.0 32.0 36.0 46 34.72367841897207 36.0 36.0 36.0 32.0 36.0 47 34.70321983601396 36.0 36.0 36.0 32.0 36.0 48 34.68994911037111 36.0 36.0 36.0 32.0 36.0 49 34.67864865609786 36.0 36.0 36.0 32.0 36.0 50 34.25283367451852 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 10.0 21 21.0 22 79.0 23 197.0 24 524.0 25 1268.0 26 2596.0 27 5115.0 28 9034.0 29 14434.0 30 22298.0 31 33099.0 32 51206.0 33 88194.0 34 201114.0 35 768106.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.325062242050564 18.0102594950457 12.059668822163182 26.605009440740556 2 16.096753419771822 19.610116360362138 37.42951432015095 26.863615899715093 3 18.99163945243007 22.779276532836658 28.343676135272155 29.885407879461116 4 13.026352714783979 15.80427897529099 34.91350509815451 36.255863211770524 5 14.710134578137254 36.368586908678466 33.6736833049778 15.247595208206485 6 35.45870406423803 34.564857341160966 16.164410334277964 13.812028260323045 7 30.761874455544447 29.878718480042966 20.04982890627806 19.30957815813453 8 27.73321907596862 34.21197914970137 18.719164918980002 19.335636855350007 9 26.47822553635397 15.050735114178018 18.607329676763577 39.86370967270443 10 16.292893564242732 27.223700090620937 31.621780764139164 24.861625580997167 11 36.9502303939624 21.570671270369843 21.64517241753717 19.83392591813059 12 23.783779269102435 23.792966645647063 28.95760860940704 23.465645475843463 13 29.651373051131007 19.750237409765496 24.735299595672586 25.86308994343091 14 22.971910895959816 19.438201214903238 25.281195893750674 32.308691995386276 15 24.910694673084453 27.171954828250634 22.066120603325658 25.85122989533925 16 25.54094945848677 26.23008737209689 23.470612456600012 24.75835071281633 17 24.137703510490713 26.35645123975087 25.14472181923115 24.36112343052726 18 24.597092114230733 25.768147559166653 25.570285042295303 24.064475284307303 19 25.384428425027373 25.6185390926395 25.05978048888455 23.937251993448577 20 25.37914664234516 25.07997200353464 25.122317492612506 24.4185638615077 21 25.568927342171577 24.983107783615928 25.00908295936597 24.438881914846526 22 25.42385055671233 24.906685642743614 25.06512586267234 24.604337937871723 23 24.495696970506874 24.908878005104835 25.304603038847535 25.290821985540752 24 24.58719136446931 25.196402530389566 25.36837480769006 24.84803129745107 25 24.87492587426605 24.796916369467713 25.336217624802682 24.991940131463554 26 24.616217263624915 25.43874009013674 25.414852851267693 24.53018979497065 27 24.973690540621803 25.130294465492014 25.016537374466292 24.87947761941989 28 24.78492917279166 25.155268608846722 25.279132700788452 24.780669517573166 29 24.673972053554277 25.573336451486274 25.203334196393524 24.549357298565926 30 24.8288620873981 25.302769611118535 25.233195242549776 24.63517305893358 31 24.83531572524975 25.095653437635463 25.144597261651512 24.924433575463276 32 24.774780794435376 25.205340781339004 24.92462068124529 25.095257742980326 33 24.562284148852203 25.046375371149132 25.344046371195066 25.047294108803598 34 25.045352496642415 25.093628266549068 25.246139608849333 24.614879627959187 35 25.014115186604435 25.00576300518169 25.405665451702674 24.57445635651119 36 24.639833357415437 25.237682004321414 25.293641573115355 24.828843065147797 37 25.07598517631317 25.086258522492365 25.231755831794416 24.606000469400044 38 24.55029954973578 25.15382565896348 25.42618915774449 24.86968563355625 39 24.944353265930836 25.17069870582192 24.981938302075115 24.903009726172133 40 25.121836937702174 25.057107801990654 25.20819813296116 24.612857127346015 41 24.53018665579762 25.369252407949993 25.470815612670012 24.629745323582377 42 25.24078357083852 25.241952929954554 24.996387515587976 24.52087598361895 43 24.82115249208811 24.992127786283387 25.205533685975094 24.9811860356534 44 24.561431350423096 25.064752720198925 25.275736752733565 25.09807917664442 45 24.50733752620545 25.452988883042256 25.210353554336113 24.82932003641618 46 24.59371985316534 25.274855608407492 25.10363202799714 25.027792510430018 47 24.653527450949277 25.318367200348124 25.414668736913054 24.613436611789545 48 24.75510422269813 25.5970378636268 24.977114105395394 24.67074380827968 49 24.75005220296513 25.29455001044059 25.03587387763625 24.91952390895803 50 24.80297006548176 25.482927970065482 25.1513430442336 24.562758920219164 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 47.0 1 42.0 2 37.0 3 86.5 4 136.0 5 135.5 6 135.0 7 112.0 8 89.0 9 131.5 10 174.0 11 264.5 12 355.0 13 662.0 14 969.0 15 1235.0 16 1501.0 17 1646.0 18 1791.0 19 1927.0 20 2063.0 21 2682.5 22 3302.0 23 4235.5 24 5169.0 25 6593.5 26 8018.0 27 10016.5 28 12015.0 29 14222.5 30 16430.0 31 18971.5 32 21513.0 33 24129.0 34 26745.0 35 31015.5 36 35286.0 37 39233.0 38 43180.0 39 47714.0 40 52248.0 41 56999.0 42 61750.0 43 65283.0 44 68816.0 45 73893.0 46 78970.0 47 83069.0 48 87168.0 49 89758.0 50 92348.0 51 92477.0 52 92606.0 53 91883.5 54 91161.0 55 89487.5 56 87814.0 57 83301.0 58 78788.0 59 72931.5 60 67075.0 61 59080.0 62 51085.0 63 44038.5 64 36992.0 65 31117.0 66 25242.0 67 21150.0 68 17058.0 69 14586.5 70 12115.0 71 9362.5 72 6610.0 73 5537.5 74 4465.0 75 3368.5 76 2272.0 77 1892.0 78 1512.0 79 1285.5 80 1059.0 81 817.5 82 576.0 83 448.5 84 321.0 85 241.5 86 162.0 87 115.5 88 69.0 89 45.5 90 22.0 91 19.0 92 16.0 93 11.0 94 6.0 95 5.5 96 5.0 97 6.0 98 7.0 99 5.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02981716316001794 2 0.005679459649527227 3 5.846502580395675E-4 4 8.352146543422392E-5 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 1.6704293086844784E-4 11 0.0 12 1.6704293086844784E-4 13 0.0 14 0.0 15 0.0 16 3.340858617368957E-4 17 0.0 18 8.352146543422392E-5 19 0.0 20 2.5056439630267177E-4 21 0.0 22 0.0 23 8.352146543422392E-5 24 9.187361197764632E-4 25 5.846502580395675E-4 26 4.176073271711196E-4 27 7.516931889080153E-4 28 0.0014198649123818067 29 5.846502580395675E-4 30 0.0014198649123818067 31 5.011287926053435E-4 32 0.0015869078432502544 33 1.6704293086844784E-4 34 7.516931889080153E-4 35 4.176073271711196E-4 36 3.340858617368957E-4 37 0.002004515170421374 38 0.0 39 0.001002257585210687 40 0.0 41 0.0010857790506449108 42 0.005011287926053435 43 0.004009030340842748 44 0.004176073271711196 45 0.0022550795667240463 46 0.0026726868938951654 47 0.0013363434469475827 48 0.004426637668013868 49 0.003925508875408524 50 0.0014198649123818067 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1197297.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.78746774398073 #Duplication Level Percentage of deduplicated Percentage of total 1 70.64948563435713 40.12005386589885 2 16.35631330315423 18.576672282266273 3 6.114335960626937 10.416529684198906 4 2.696601802389575 6.125327514862331 5 1.377287258804633 3.910632789178186 6 0.7903775714595808 2.6930124506896056 7 0.4781328765558084 1.9006368713324777 8 0.32421763630861994 1.4729198851124343 9 0.23348826869178663 1.1933286774239464 >10 0.9045004448033002 8.755961709982348 >50 0.04802959687863784 1.8761127713208683 >100 0.0263417262027919 2.68291520811749 >500 8.879197670284251E-4 0.2758962896162005 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.352146543422392E-5 2 0.0 0.0 0.0 0.0 8.352146543422392E-5 3 0.0 0.0 0.0 0.0 8.352146543422392E-5 4 0.0 0.0 0.0 0.0 8.352146543422392E-5 5 0.0 8.352146543422392E-5 0.0 0.0 8.352146543422392E-5 6 0.0 8.352146543422392E-5 0.0 0.0 8.352146543422392E-5 7 0.0 8.352146543422392E-5 0.0 0.0 8.352146543422392E-5 8 0.0 8.352146543422392E-5 0.0 0.0 8.352146543422392E-5 9 0.0 8.352146543422392E-5 0.0 0.0 8.352146543422392E-5 10 0.0 8.352146543422392E-5 0.0 0.0 2.5056439630267177E-4 11 0.0 8.352146543422392E-5 0.0 0.0 2.5056439630267177E-4 12 0.0 8.352146543422392E-5 0.0 0.0 5.846502580395675E-4 13 0.0 8.352146543422392E-5 0.0 0.0 7.516931889080153E-4 14 0.0 8.352146543422392E-5 0.0 0.0 7.516931889080153E-4 15 0.0 8.352146543422392E-5 0.0 1.6704293086844784E-4 0.001002257585210687 16 0.0 8.352146543422392E-5 0.0 1.6704293086844784E-4 0.001085779050644911 17 0.0 8.352146543422392E-5 0.0 2.5056439630267177E-4 0.001169300516079135 18 0.0 8.352146543422392E-5 0.0 2.5056439630267177E-4 0.0014198649123818067 19 0.0 8.352146543422392E-5 0.0 5.846502580395675E-4 0.0014198649123818067 20 0.0 8.352146543422392E-5 0.0 0.001002257585210687 0.0015869078432502546 21 0.0 8.352146543422392E-5 0.0 0.0014198649123818067 0.0015869078432502546 22 0.0 8.352146543422392E-5 0.0 0.0018374722395529263 0.0015869078432502546 23 0.0 8.352146543422392E-5 0.0 0.002255079566724046 0.0015869078432502546 24 0.0 8.352146543422392E-5 0.0 0.0028397298247636133 0.0015869078432502546 25 0.0 8.352146543422392E-5 0.0 0.0035079015482374046 0.0015869078432502546 26 0.0 8.352146543422392E-5 0.0 0.004927766460619211 0.0015869078432502546 27 0.0 8.352146543422392E-5 0.0 0.005261852322356107 0.0015869078432502546 28 0.0 8.352146543422392E-5 0.0 0.006681717234737914 0.0015869078432502546 29 0.0 8.352146543422392E-5 0.0 0.00893679680146196 0.0015869078432502546 30 0.0 1.6704293086844784E-4 0.0 0.012444698349699364 0.0015869078432502546 31 0.0 1.6704293086844784E-4 0.0 0.020629801962253308 0.0017539507741187023 32 0.0 1.6704293086844784E-4 0.0 0.02831377678220191 0.0017539507741187023 33 0.0 1.6704293086844784E-4 0.0 0.037668180910834986 0.002004515170421374 34 0.0 1.6704293086844784E-4 0.0 0.04718962797033652 0.00233860103215827 35 0.0 1.6704293086844784E-4 0.0 0.058465025803956745 0.00233860103215827 36 0.0 1.6704293086844784E-4 0.0 0.07491875449449886 0.00233860103215827 37 0.0 2.5056439630267177E-4 0.0 0.09588264231848906 0.00233860103215827 38 0.0 2.5056439630267177E-4 0.0 0.12369529030808563 0.0024221224975924938 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 940 0.0 23.64364 1 GGTATCA 450 0.0 21.515972 1 GGCGTTA 185 0.0 20.219095 42 TAGTGCG 55 0.004484228 19.999506 20 CGGTCCA 125 2.2884706E-8 19.359524 10 CGCAATA 145 6.3046173E-9 18.207207 36 TCAACGC 1260 0.0 17.809084 4 GTATAGA 235 0.0 17.791254 1 ATCAACG 1270 0.0 17.668854 3 CAACGCA 1280 0.0 17.358946 5 GCGTTAT 205 5.456968E-12 17.172459 43 CGAGCCG 205 5.456968E-12 17.170307 15 CAATACG 145 1.2483542E-7 16.690638 38 GTATTAG 200 7.2759576E-11 16.503729 1 CGTTATT 240 0.0 16.50166 44 GTAATAC 160 2.1296728E-8 16.499592 3 CGGCGTT 215 1.2732926E-11 16.373056 41 TATCAAC 1400 0.0 16.342453 2 AACGCAG 1360 0.0 16.337833 6 GTATTAC 135 1.0828662E-6 16.299978 1 >>END_MODULE