##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062293_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1192069 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.309216161145034 32.0 32.0 32.0 32.0 32.0 2 31.516387893653807 32.0 32.0 32.0 32.0 32.0 3 31.61008465114016 32.0 32.0 32.0 32.0 32.0 4 31.68079532308952 32.0 32.0 32.0 32.0 32.0 5 31.661133709541982 32.0 32.0 32.0 32.0 32.0 6 35.31218578790322 36.0 36.0 36.0 36.0 36.0 7 35.3299699933477 36.0 36.0 36.0 36.0 36.0 8 35.27076536676988 36.0 36.0 36.0 36.0 36.0 9 35.352223738726536 36.0 36.0 36.0 36.0 36.0 10 35.25881974952792 36.0 36.0 36.0 36.0 36.0 11 35.3536800302667 36.0 36.0 36.0 36.0 36.0 12 35.304744943455454 36.0 36.0 36.0 36.0 36.0 13 35.323410809273625 36.0 36.0 36.0 36.0 36.0 14 35.28385521307911 36.0 36.0 36.0 36.0 36.0 15 35.27374422118183 36.0 36.0 36.0 36.0 36.0 16 35.27356302361692 36.0 36.0 36.0 36.0 36.0 17 35.27728260696319 36.0 36.0 36.0 36.0 36.0 18 35.25758240504535 36.0 36.0 36.0 36.0 36.0 19 35.2310419950523 36.0 36.0 36.0 36.0 36.0 20 35.24037115301211 36.0 36.0 36.0 36.0 36.0 21 35.207243037106075 36.0 36.0 36.0 36.0 36.0 22 35.20516010398727 36.0 36.0 36.0 36.0 36.0 23 35.185173005924995 36.0 36.0 36.0 36.0 36.0 24 35.13373890269774 36.0 36.0 36.0 36.0 36.0 25 35.13230945524126 36.0 36.0 36.0 36.0 36.0 26 35.07772452769093 36.0 36.0 36.0 36.0 36.0 27 35.08146256634473 36.0 36.0 36.0 36.0 36.0 28 35.06486872823637 36.0 36.0 36.0 36.0 36.0 29 35.00056120912464 36.0 36.0 36.0 36.0 36.0 30 35.001494041032856 36.0 36.0 36.0 36.0 36.0 31 34.957955453920874 36.0 36.0 36.0 36.0 36.0 32 34.98468545025498 36.0 36.0 36.0 36.0 36.0 33 34.941367487955816 36.0 36.0 36.0 36.0 36.0 34 34.87502904613743 36.0 36.0 36.0 32.0 36.0 35 34.87544261280178 36.0 36.0 36.0 32.0 36.0 36 34.819600207706095 36.0 36.0 36.0 32.0 36.0 37 34.84366844536684 36.0 36.0 36.0 32.0 36.0 38 34.833928237375524 36.0 36.0 36.0 32.0 36.0 39 34.72761811606543 36.0 36.0 36.0 32.0 36.0 40 34.75593694660292 36.0 36.0 36.0 32.0 36.0 41 34.67903703560784 36.0 36.0 36.0 32.0 36.0 42 34.722119273297096 36.0 36.0 36.0 32.0 36.0 43 34.68973775846868 36.0 36.0 36.0 32.0 36.0 44 34.565333885874054 36.0 36.0 36.0 32.0 36.0 45 34.57785245652727 36.0 36.0 36.0 32.0 36.0 46 34.50564019364651 36.0 36.0 36.0 32.0 36.0 47 34.53394644101977 36.0 36.0 36.0 32.0 36.0 48 34.4916636536979 36.0 36.0 36.0 32.0 36.0 49 34.354950090976274 36.0 36.0 36.0 32.0 36.0 50 34.021640525842045 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 4.0 21 18.0 22 53.0 23 149.0 24 440.0 25 1138.0 26 2473.0 27 4983.0 28 8773.0 29 14593.0 30 22359.0 31 34502.0 32 52824.0 33 88062.0 34 193350.0 35 768345.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.1804316759267 21.118655076316564 12.034596506951106 23.666316740805634 2 15.131294709034213 21.338273995333942 40.236054472560284 23.29437682307156 3 17.55670183521256 27.54932810097402 29.535286967449032 25.358683096364388 4 11.224098605030413 16.066184088337167 39.15704543948379 33.55267186714863 5 13.728651613287484 37.532139498636404 32.93232187062997 15.806887017446138 6 30.58477417796147 39.6627035225369 16.98419635809061 12.76832594141101 7 27.201697217191285 32.3766493382514 22.206097130283567 18.215556314273755 8 26.211653855607352 35.20953904513917 20.07551576292983 18.503291336323652 9 26.334129987442 13.938790455921596 21.283918967777872 38.44316058885853 10 16.664303828050222 27.107407373230913 30.924803849441602 25.303484949277266 11 34.842949527250525 25.30616935764624 21.263702017249 18.587179097854232 12 21.581301082403787 27.27400846763065 31.013305437856364 20.1313850121092 13 27.202787758091183 23.159397652317107 27.088029300317345 22.549785289274364 14 21.505885984787792 20.95096844226299 27.46627921705874 30.076866355890473 15 25.50892607726566 27.391199670488874 23.396045027594877 23.703829224650587 16 24.700014093297632 29.684511465904283 23.095643157704 22.51983128309408 17 20.616088498232905 28.559504525325295 27.280803376314626 23.543603600127174 18 20.575605230242928 29.479970505013558 28.51794404173591 21.426480223007598 19 23.653244904447646 25.457670654970478 28.246854838100816 22.642229602481066 20 25.067907541721823 25.974907345423308 26.50675887663561 22.450426236219258 21 27.30622136805839 26.23447132674367 24.14675660553206 22.312550699665877 22 23.217196320011677 27.08031162625653 27.948969396905714 21.753522656826075 23 22.930216287815554 27.987054440640602 27.627175943674402 21.455553327869445 24 22.37545887105975 26.40706476876925 27.344520727214157 23.87295563295684 25 23.90155267857817 26.228515295675 26.14630528937503 23.723626736371802 26 23.980759422312897 27.398361161816815 26.45914984430366 22.161729571566628 27 22.45475929225514 27.150800122140684 28.161229057402764 22.23321152820141 28 21.841132369558633 27.605073281383568 28.32752680468672 22.22626754437108 29 22.573406416780333 25.574089267168986 27.66794009036443 24.18456422568625 30 22.939900373640793 27.044664084009618 26.935776399391305 23.07965914295829 31 24.616463545581446 27.79666192419199 25.770512321486095 21.81636220874047 32 21.55569872556323 27.48704758836833 28.07787553604864 22.879378150019797 33 22.237247528024945 27.870506844017473 27.757593348673687 22.1346522792839 34 22.158401688508444 25.108006489617118 28.77636826396031 23.95722355791413 35 23.734695675151944 26.14656079995638 26.398812145310867 23.71993137958081 36 23.652781261455942 27.804141881286874 25.94334043304613 22.599736424211056 37 22.99049113078785 26.690435344303275 27.278919839435588 23.040153685473282 38 22.43712402553879 27.801830263181078 27.8518273690533 21.909218342226836 39 23.013464892375655 25.63237010124465 27.580421504568132 23.773743501811566 40 23.748541401546387 26.397213584113 26.76153813244032 23.092706881900295 41 24.512689043766546 27.562891551710834 25.997943042753167 21.926476361769453 42 22.272212481438913 27.850269712502413 27.581060561572468 22.296457244486202 43 22.060843092002884 27.585093165617604 27.55480836263241 22.799255379747102 44 22.110860928041234 25.90946765815224 28.072274197661777 23.907397216144748 45 23.872892887283417 26.50369033098049 26.407048792232434 23.216367989503656 46 24.858876971926396 27.781920984526593 25.260204103033026 22.09899794051399 47 22.075883700582434 28.327157754510885 27.389034621550408 22.207923923356272 48 21.930561917273618 28.490150382625885 26.75033933823591 22.82894836186459 49 22.61908057605981 25.902893302092483 27.497737051699247 23.980289070148462 50 23.06084219551009 26.63963202916654 26.04175492491512 24.257770850408246 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 21.0 1 20.0 2 19.0 3 40.0 4 61.0 5 81.0 6 101.0 7 110.0 8 119.0 9 158.5 10 198.0 11 316.0 12 434.0 13 879.0 14 1324.0 15 1884.5 16 2445.0 17 2624.5 18 2804.0 19 2886.5 20 2969.0 21 3510.5 22 4052.0 23 4828.5 24 5605.0 25 7731.5 26 9858.0 27 12991.5 28 16125.0 29 19434.0 30 22743.0 31 26569.0 32 30395.0 33 36853.5 34 43312.0 35 50620.0 36 57928.0 37 67768.0 38 77608.0 39 84287.0 40 90966.0 41 94071.0 42 97176.0 43 93485.0 44 89794.0 45 87305.5 46 84817.0 47 82218.5 48 79620.0 49 76825.5 50 74031.0 51 76980.0 52 79929.0 53 77131.0 54 74333.0 55 71165.0 56 67997.0 57 61176.0 58 54355.0 59 48204.5 60 42054.0 61 35926.5 62 29799.0 63 24033.5 64 18268.0 65 15505.5 66 12743.0 67 9474.5 68 6206.0 69 5050.0 70 3894.0 71 3291.0 72 2688.0 73 2437.0 74 2186.0 75 1741.5 76 1297.0 77 1034.0 78 771.0 79 609.5 80 448.0 81 378.5 82 309.0 83 230.0 84 151.0 85 98.0 86 45.0 87 34.5 88 24.0 89 20.0 90 16.0 91 15.5 92 15.0 93 10.0 94 5.0 95 5.0 96 5.0 97 4.5 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03254845147386602 2 0.004697714645712623 3 0.0 4 0.0 5 0.0 6 1.6777552306116507E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.001090540899897573 17 0.0 18 1.6777552306116507E-4 19 0.0 20 5.872143307140778E-4 21 0.0 22 0.0 23 0.0 24 0.001090540899897573 25 0.0 26 4.1943880765291276E-4 27 8.388776153058254E-5 28 0.001677755230611651 29 5.872143307140778E-4 30 0.0012583164229587381 31 4.1943880765291276E-4 32 0.001090540899897573 33 5.033265691834953E-4 34 9.227653768364079E-4 35 3.3555104612233014E-4 36 1.6777552306116507E-4 37 0.002013306276733981 38 0.0 39 5.033265691834953E-4 40 0.0 41 0.0014260919460199032 42 0.0049493779303043705 43 0.004362163599590292 44 0.004446051361120874 45 0.002936071653570389 46 0.002013306276733981 47 6.711020922446603E-4 48 0.0036071737458150495 49 0.003355510461223302 50 0.001509979707550486 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1192069.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.12279214112227 #Duplication Level Percentage of deduplicated Percentage of total 1 61.926320096687824 22.988779090139445 2 15.752166875907667 11.695288334131831 3 7.645456521991047 8.514620798695836 4 4.29094098075754 6.3716684047394185 5 2.580919029575887 4.790546033400632 6 1.7028101057740637 3.7927839367471785 7 1.2208609186536992 3.1725236281480593 8 0.8617876547645618 2.559357118208805 9 0.6386907965409858 2.1338987114194947 >10 3.0633422189300767 19.984102281788385 >50 0.2019918193698471 5.236134898850696 >100 0.10857981257325927 7.318574265274062 >500 0.005678859697781819 1.2490374713185222 >1k 4.5430877582254553E-4 0.1926850271376467 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTGTAAAGGTATAAGGGAGCTTGACTGCGAGAGCTACAACTCGAGCAGGG 1263 0.10595024281312576 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 8.388776153058254E-5 0.0 0.0 0.0 5 0.0 2.5166328459174763E-4 0.0 0.0 0.0 6 0.0 2.5166328459174763E-4 0.0 0.0 0.0 7 0.0 2.5166328459174763E-4 0.0 0.0 0.0 8 0.0 2.5166328459174763E-4 0.0 0.0 0.0 9 0.0 2.5166328459174763E-4 0.0 0.0 0.0 10 0.0 2.5166328459174763E-4 0.0 0.0 0.0 11 0.0 2.5166328459174763E-4 0.0 0.0 0.0 12 0.0 2.5166328459174763E-4 0.0 0.0 0.0 13 0.0 2.5166328459174763E-4 0.0 0.0 0.0 14 0.0 2.5166328459174763E-4 0.0 0.0 0.0 15 0.0 2.5166328459174763E-4 0.0 0.0 0.0 16 0.0 2.5166328459174763E-4 0.0 0.0 0.0 17 0.0 2.5166328459174763E-4 0.0 0.0 0.0 18 0.0 2.5166328459174763E-4 0.0 0.0 0.0 19 0.0 3.3555104612233014E-4 0.0 0.0 0.0 20 0.0 4.194388076529127E-4 0.0 0.0 0.0 21 0.0 4.194388076529127E-4 0.0 0.0 0.0 22 0.0 4.194388076529127E-4 0.0 0.0 0.0 23 0.0 4.194388076529127E-4 0.0 0.0 0.0 24 0.0 4.194388076529127E-4 0.0 0.0 0.0 25 0.0 4.194388076529127E-4 0.0 0.0 0.0 26 0.0 5.033265691834953E-4 0.0 0.0 0.0 27 0.0 6.711020922446603E-4 0.0 0.0 0.0 28 0.0 6.711020922446603E-4 0.0 8.388776153058254E-5 0.0 29 0.0 6.711020922446603E-4 0.0 3.3555104612233014E-4 0.0 30 0.0 6.711020922446603E-4 0.0 7.549898537752429E-4 0.0 31 0.0 6.711020922446603E-4 0.0 0.002768296130509224 0.0 32 0.0 6.711020922446603E-4 0.0 0.00461382688418204 0.0 33 0.0 6.711020922446603E-4 0.0 0.007885449583874759 0.0 34 0.0 6.711020922446603E-4 0.0 0.011073184522036896 0.0 35 0.0 6.711020922446603E-4 0.0 0.015351460360096604 0.0 36 0.0 6.711020922446603E-4 0.0 0.02139137919029855 0.0 37 0.0 6.711020922446603E-4 0.0 0.029528492058765055 0.0 38 0.0 6.711020922446603E-4 0.0 0.044796064657331075 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1420 0.0 33.318623 1 GTATCAA 3315 0.0 26.619373 1 AGGTCGC 45 0.0013984505 24.4437 6 GCACGAA 215 0.0 22.514719 43 ACGTACG 60 2.8700795E-4 22.00302 43 CGACCCG 140 7.2759576E-12 22.000252 37 TAGGACG 220 0.0 20.99936 4 CGCACGA 160 1.8189894E-12 20.626966 42 GCGTGCA 75 5.4738382E-5 20.532707 35 TACTCGT 55 0.004484368 19.99939 5 TAGGCCC 145 2.9649527E-10 19.723536 4 TGTCGGG 280 0.0 19.642258 23 TGTCACG 80 8.9905414E-5 19.249413 5 CGTCTTA 320 0.0 19.249413 15 GTCACGT 80 8.9905414E-5 19.249413 6 TAGGGTC 355 0.0 19.210682 4 CGCTCCG 185 1.8189894E-12 19.02964 43 TCTCGTC 325 0.0 18.953268 12 GGTCGCG 70 8.124899E-4 18.856567 7 TTGTCGG 280 0.0 18.856567 22 >>END_MODULE