##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062292_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 433735 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25481227016496 32.0 32.0 32.0 32.0 32.0 2 31.44349429951468 32.0 32.0 32.0 32.0 32.0 3 31.588154057200825 32.0 32.0 32.0 32.0 32.0 4 31.655430158968034 32.0 32.0 32.0 32.0 32.0 5 31.64216399414389 32.0 32.0 32.0 32.0 32.0 6 35.26416129664427 36.0 36.0 36.0 36.0 36.0 7 35.268643296021764 36.0 36.0 36.0 36.0 36.0 8 35.216420164386086 36.0 36.0 36.0 36.0 36.0 9 35.323450955076254 36.0 36.0 36.0 36.0 36.0 10 35.20692127681649 36.0 36.0 36.0 36.0 36.0 11 35.31934245564688 36.0 36.0 36.0 36.0 36.0 12 35.252898659319634 36.0 36.0 36.0 36.0 36.0 13 35.28171579420614 36.0 36.0 36.0 36.0 36.0 14 35.26291629681718 36.0 36.0 36.0 36.0 36.0 15 35.24021579997003 36.0 36.0 36.0 36.0 36.0 16 35.26024185274419 36.0 36.0 36.0 36.0 36.0 17 35.25454943686813 36.0 36.0 36.0 36.0 36.0 18 35.251194854000715 36.0 36.0 36.0 36.0 36.0 19 35.22843441271744 36.0 36.0 36.0 36.0 36.0 20 35.22329533009787 36.0 36.0 36.0 36.0 36.0 21 35.211940470563825 36.0 36.0 36.0 36.0 36.0 22 35.17179844836133 36.0 36.0 36.0 36.0 36.0 23 35.16638961577922 36.0 36.0 36.0 36.0 36.0 24 35.1614949220146 36.0 36.0 36.0 36.0 36.0 25 35.12845631549218 36.0 36.0 36.0 36.0 36.0 26 35.10111012484582 36.0 36.0 36.0 36.0 36.0 27 35.068557990478055 36.0 36.0 36.0 36.0 36.0 28 35.02597899639181 36.0 36.0 36.0 36.0 36.0 29 35.004820915997094 36.0 36.0 36.0 36.0 36.0 30 34.96012772776004 36.0 36.0 36.0 36.0 36.0 31 34.95719736705592 36.0 36.0 36.0 36.0 36.0 32 34.935884814460444 36.0 36.0 36.0 36.0 36.0 33 34.95154875672934 36.0 36.0 36.0 36.0 36.0 34 34.93528767565449 36.0 36.0 36.0 36.0 36.0 35 34.908446401604664 36.0 36.0 36.0 36.0 36.0 36 34.87644990604863 36.0 36.0 36.0 36.0 36.0 37 34.81469560907006 36.0 36.0 36.0 32.0 36.0 38 34.81711183095669 36.0 36.0 36.0 32.0 36.0 39 34.706514346317455 36.0 36.0 36.0 32.0 36.0 40 34.76669856018076 36.0 36.0 36.0 32.0 36.0 41 34.73355850922798 36.0 36.0 36.0 32.0 36.0 42 34.723912066123326 36.0 36.0 36.0 32.0 36.0 43 34.74508628540468 36.0 36.0 36.0 32.0 36.0 44 34.674056739714345 36.0 36.0 36.0 32.0 36.0 45 34.66242751910729 36.0 36.0 36.0 32.0 36.0 46 34.56203211638443 36.0 36.0 36.0 32.0 36.0 47 34.56636425467163 36.0 36.0 36.0 32.0 36.0 48 34.55498172847476 36.0 36.0 36.0 32.0 36.0 49 34.50791842945577 36.0 36.0 36.0 32.0 36.0 50 34.144733535453675 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 2.0 21 5.0 22 7.0 23 48.0 24 141.0 25 399.0 26 918.0 27 1768.0 28 3331.0 29 5447.0 30 8196.0 31 12199.0 32 18889.0 33 31882.0 34 71724.0 35 278778.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.423997195630164 22.666734315939014 13.276938439930905 24.632330048499913 2 12.469911186121795 22.58228887105848 44.08460836123177 20.86319158158795 3 16.77364467623013 28.043685761319146 31.271701088685695 23.910968473765028 4 10.202797106060396 18.928191011080525 41.86091014308309 29.008101739775995 5 10.256031908884458 41.28949704312541 37.10053373603699 11.353937311953151 6 27.745346226027934 41.70851259066617 19.3519530403427 11.194188142963199 7 25.36894647653521 34.11945081674294 23.85442724244066 16.657175464281185 8 22.663838518911316 40.669072129295536 21.276816489331043 15.390272862462103 9 25.34335481342294 16.400106055540824 22.560549644368106 35.695989486668125 10 13.814195303583984 30.47298465652991 35.60538116591928 20.107438873966824 11 31.89528168121088 24.681429905356957 26.361257449825352 17.062030963606812 12 21.40846369326893 27.640379494391738 33.54352311895512 17.40763369338421 13 27.08566290476904 23.965785560307562 27.81375724808927 21.134794286834126 14 18.76122517205206 24.883165988449168 29.351101479013685 27.004507360485093 15 20.82492766320449 34.46643687966154 24.374099392486194 20.334536064647768 16 19.736195937113095 30.96089511701954 29.580085352441955 19.722823593425417 17 18.510380762447117 32.01655388658974 29.69877920850289 19.774286142460255 18 18.908824302452658 30.24641831168412 32.298828314128016 18.545929071735213 19 21.700346986062918 29.22798482944655 29.14936539592147 19.922302788569056 20 22.102307179762665 29.97304793501993 29.63574364874243 18.288901236474974 21 21.525585899224183 29.02209874693073 28.110712762401008 21.341602591444083 22 20.97478875350156 31.28730676565184 28.814829331273707 18.923075149572895 23 19.909391679251158 31.320276205517196 29.500962569310758 19.2693695459209 24 20.885064706004414 29.55956572161086 30.445598769744382 19.109770802640348 25 20.353535469978073 30.36960526406799 29.839094558172885 19.437764707781056 26 18.748717523073058 31.15387186989171 30.725726314236248 19.371684292798992 27 19.253275048762607 31.286226120156595 29.685705985696302 19.774792845384496 28 18.989133717753333 31.09813315749308 29.1141662843217 20.798566840431885 29 20.03532118764035 30.024623386684002 29.09709637704215 20.842959048633496 30 19.771792985942835 29.95856859928665 30.028658448017083 20.240979966753432 31 21.00849829619075 29.219752198351983 29.723978290841853 20.04777121461541 32 19.041437935319657 30.76016812186299 30.261935338099704 19.93645860471765 33 19.226761102426835 31.23965379702767 30.337718509501215 19.19586659104428 34 19.443618279532707 30.664859094692332 31.1707025783262 18.720820047448765 35 19.525747288090656 31.166495671320043 30.043229160662616 19.264527879926682 36 18.95954663457326 30.231893280213217 31.117920199938208 19.690639885275306 37 19.438264161557846 30.032485872449723 29.306914257124873 21.22233570886756 38 19.66062226935802 31.4459289658432 29.341879258072325 19.55156950672646 39 20.448063670506972 30.08970956786779 29.44023166325827 20.02199509836697 40 21.19727483371183 29.54315423011747 30.222140246924965 19.03743068924574 41 21.22716331744026 28.993940958933166 30.712744275266758 19.06615144835982 42 19.667708823285285 31.4802774165583 29.951396766547695 18.900616993608722 43 18.905689437327652 31.41018546698761 30.24029549290319 19.44382960278154 44 18.76609647393553 31.0057572634438 30.31659184760429 19.911554415016383 45 19.29909504870598 31.128941149345785 29.84033661882529 19.731627183122946 46 20.0874288718171 29.83763868266455 29.70091578976492 20.37401665575343 47 20.97890166946794 29.958430455743308 29.39540867496213 19.66725919982662 48 19.43460697783803 30.5384168442022 29.426398841638306 20.600577336321464 49 20.38568572884412 29.848912088646852 29.6736842347961 20.09171794771293 50 19.281527969270922 31.385944121403835 29.15458146387351 20.177946445451735 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 13.0 1 7.5 2 2.0 3 6.5 4 11.0 5 24.5 6 38.0 7 34.0 8 30.0 9 53.0 10 76.0 11 121.5 12 167.0 13 262.0 14 357.0 15 514.0 16 671.0 17 937.0 18 1203.0 19 1496.5 20 1790.0 21 2521.5 22 3253.0 23 4049.5 24 4846.0 25 6566.0 26 8286.0 27 11002.0 28 13718.0 29 16510.5 30 19303.0 31 21666.5 32 24030.0 33 28381.5 34 32733.0 35 36746.5 36 40760.0 37 42792.5 38 44825.0 39 44035.0 40 43245.0 41 41236.0 42 39227.0 43 36530.5 44 33834.0 45 31501.5 46 29169.0 47 26749.5 48 24330.0 49 21480.5 50 18631.0 51 16896.5 52 15162.0 53 13181.5 54 11201.0 55 9434.0 56 7667.0 57 6749.5 58 5832.0 59 4701.5 60 3571.0 61 2988.0 62 2405.0 63 1863.5 64 1322.0 65 1130.0 66 938.0 67 713.0 68 488.0 69 375.5 70 263.0 71 197.0 72 131.0 73 105.0 74 79.0 75 70.5 76 62.0 77 51.0 78 40.0 79 29.5 80 19.0 81 11.0 82 3.0 83 1.5 84 0.0 85 0.0 86 0.0 87 1.0 88 2.0 89 1.0 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02904999596527834 2 0.004380554947145146 3 2.3055552353395506E-4 4 2.3055552353395506E-4 5 0.0 6 2.3055552353395506E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.222220941358202E-4 17 0.0 18 2.3055552353395506E-4 19 0.0 20 4.611110470679101E-4 21 0.0 22 0.0 23 0.0 24 9.222220941358202E-4 25 4.611110470679101E-4 26 9.222220941358202E-4 27 2.3055552353395506E-4 28 0.0018444441882716405 29 2.3055552353395506E-4 30 0.0013833331412037304 31 2.3055552353395506E-4 32 4.611110470679101E-4 33 2.3055552353395506E-4 34 9.222220941358202E-4 35 0.0 36 2.3055552353395506E-4 37 0.0018444441882716405 38 0.0 39 4.611110470679101E-4 40 0.0 41 6.916665706018652E-4 42 0.004380554947145146 43 0.004380554947145146 44 0.005072221517747011 45 0.0023055552353395507 46 0.0025361107588735055 47 9.222220941358202E-4 48 0.004380554947145146 49 0.003227777329475371 50 0.0020749997118055955 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 433735.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.85921314699298 #Duplication Level Percentage of deduplicated Percentage of total 1 70.00858632643207 39.10624545727827 2 16.268449231323448 18.17485546367061 3 6.303284016632804 10.562894562333774 4 2.8555937676900296 6.380448837224885 5 1.50380440966098 4.200066552532031 6 0.868664203502382 2.911373933796147 7 0.5079607721244175 1.9862002328286281 8 0.34542931071264 1.5436327595452979 9 0.2636973735905582 1.3256935017927505 >10 0.9965642635497677 9.407583207330934 >50 0.053912884164264714 2.091392651104687 >100 0.024053440616666682 2.3096128405619787 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 483 0.1113583178669003 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 2.3055552353395506E-4 0.0 13 0.0 0.0 0.0 2.3055552353395506E-4 0.0 14 0.0 0.0 0.0 2.3055552353395506E-4 0.0 15 0.0 0.0 0.0 2.3055552353395506E-4 0.0 16 0.0 0.0 0.0 2.3055552353395506E-4 0.0 17 0.0 0.0 0.0 2.3055552353395506E-4 0.0 18 0.0 0.0 0.0 4.611110470679101E-4 0.0 19 0.0 0.0 0.0 4.611110470679101E-4 0.0 20 0.0 0.0 0.0 6.916665706018652E-4 0.0 21 0.0 0.0 0.0 9.222220941358202E-4 0.0 22 0.0 0.0 0.0 0.0013833331412037304 0.0 23 0.0 0.0 0.0 0.0013833331412037304 0.0 24 0.0 0.0 0.0 0.0016138886647376854 0.0 25 0.0 0.0 0.0 0.0016138886647376854 0.0 26 0.0 0.0 0.0 0.0016138886647376854 0.0 27 0.0 0.0 0.0 0.0020749997118055955 0.0 28 0.0 0.0 0.0 0.002766666282407461 0.0 29 0.0 0.0 0.0 0.0046111104706791015 0.0 30 0.0 0.0 0.0 0.008530554370756338 0.0 31 0.0 0.0 0.0 0.014294442459105215 0.0 32 0.0 0.0 0.0 0.021211108165123865 0.0 33 0.0 0.0 0.0 0.02904999596527834 0.0 34 0.0 0.0 0.0 0.037349994812500724 0.0 35 0.0 0.0 0.0 0.04657221575385892 0.0 36 0.0 0.0 0.0 0.057869436407022724 0.0 37 0.0 0.0 0.0 0.08392221056635964 0.0 38 0.0 0.0 0.0 0.10859165158449284 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGGTAT 35 3.212709E-4 31.431536 44 CGTTTTG 35 3.2148825E-4 31.427912 25 CGCGGTA 30 0.0057383575 29.336102 43 GGCCGCG 30 0.0057383575 29.336102 40 TAGGACC 250 0.0 29.03939 4 GGTATCA 325 0.0 25.725506 1 GTATCAA 730 0.0 25.618856 1 TGACCGT 45 0.0013969407 24.443932 5 GCGGGGT 65 1.808595E-5 23.694542 44 CTGTAGG 725 0.0 23.367722 1 GACTCAC 95 2.6759153E-8 23.157408 7 GTCCTAC 685 0.0 22.80507 1 GACCGTG 50 0.0025781093 21.999538 6 TTCGTAC 50 0.0025781093 21.999538 24 CGTACAT 50 0.0025781093 21.999538 26 TACACCG 50 0.0025781093 21.999538 5 TGTAGGA 810 0.0 21.72794 2 AGGACCT 365 0.0 21.095448 5 TCTAGAC 75 5.463152E-5 20.532904 3 GTAGGAC 815 0.0 20.514906 3 >>END_MODULE