##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062291_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4192422 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.296281481205853 32.0 32.0 32.0 32.0 32.0 2 31.472229417744682 32.0 32.0 32.0 32.0 32.0 3 31.56967237553853 32.0 32.0 32.0 32.0 32.0 4 31.63893353293156 32.0 32.0 32.0 32.0 32.0 5 31.61855223543813 32.0 32.0 32.0 32.0 32.0 6 35.24671204377803 36.0 36.0 36.0 36.0 36.0 7 35.24713161031976 36.0 36.0 36.0 36.0 36.0 8 35.206387143278995 36.0 36.0 36.0 36.0 36.0 9 35.27677843499533 36.0 36.0 36.0 36.0 36.0 10 35.16410943364003 36.0 36.0 36.0 36.0 36.0 11 35.27869403414065 36.0 36.0 36.0 36.0 36.0 12 35.202283071694595 36.0 36.0 36.0 36.0 36.0 13 35.237894944736006 36.0 36.0 36.0 36.0 36.0 14 35.19640914011042 36.0 36.0 36.0 36.0 36.0 15 35.178518526999426 36.0 36.0 36.0 36.0 36.0 16 35.19312798186824 36.0 36.0 36.0 36.0 36.0 17 35.173881827735855 36.0 36.0 36.0 36.0 36.0 18 35.16937059294126 36.0 36.0 36.0 36.0 36.0 19 35.1648233407801 36.0 36.0 36.0 36.0 36.0 20 35.16105582882639 36.0 36.0 36.0 36.0 36.0 21 35.14879418150176 36.0 36.0 36.0 36.0 36.0 22 35.13593502753301 36.0 36.0 36.0 36.0 36.0 23 35.10686853565791 36.0 36.0 36.0 36.0 36.0 24 35.09117975241996 36.0 36.0 36.0 36.0 36.0 25 35.076112089861184 36.0 36.0 36.0 36.0 36.0 26 35.03385155406588 36.0 36.0 36.0 36.0 36.0 27 35.02178335100808 36.0 36.0 36.0 36.0 36.0 28 34.99947238135856 36.0 36.0 36.0 36.0 36.0 29 34.98111807446865 36.0 36.0 36.0 36.0 36.0 30 34.96317260046818 36.0 36.0 36.0 36.0 36.0 31 34.961065465260894 36.0 36.0 36.0 36.0 36.0 32 34.93704784489729 36.0 36.0 36.0 36.0 36.0 33 34.914014381185865 36.0 36.0 36.0 32.0 36.0 34 34.904949215513135 36.0 36.0 36.0 32.0 36.0 35 34.896165510056 36.0 36.0 36.0 32.0 36.0 36 34.87134739775719 36.0 36.0 36.0 32.0 36.0 37 34.86307342152102 36.0 36.0 36.0 32.0 36.0 38 34.84723651388148 36.0 36.0 36.0 32.0 36.0 39 34.83295717845198 36.0 36.0 36.0 32.0 36.0 40 34.82359791070651 36.0 36.0 36.0 32.0 36.0 41 34.798415331281056 36.0 36.0 36.0 32.0 36.0 42 34.76638921368126 36.0 36.0 36.0 32.0 36.0 43 34.757368413771324 36.0 36.0 36.0 32.0 36.0 44 34.716824308239964 36.0 36.0 36.0 32.0 36.0 45 34.691087395305146 36.0 36.0 36.0 32.0 36.0 46 34.67982683995075 36.0 36.0 36.0 32.0 36.0 47 34.65138385401088 36.0 36.0 36.0 32.0 36.0 48 34.62571158151541 36.0 36.0 36.0 32.0 36.0 49 34.61008171410226 36.0 36.0 36.0 32.0 36.0 50 34.20486701958915 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 10.0 20 43.0 21 150.0 22 419.0 23 967.0 24 2482.0 25 5606.0 26 11539.0 27 21163.0 28 35880.0 29 55393.0 30 80651.0 31 116869.0 32 173731.0 33 287967.0 34 653894.0 35 2745655.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.90042538083372 18.330482826811686 13.033026426676924 25.736065365677675 2 16.206881746079073 20.215731409147832 36.677249686922295 26.900137157850796 3 18.913232328677463 23.16090443357932 28.45043452292641 29.475428714816807 4 13.416100207565181 16.433237334636004 34.45455581957715 35.696106638221664 5 15.225454510759896 35.944537999532486 32.2636806426837 16.566326847023916 6 34.43470304473602 34.28524268584034 16.686893667040675 14.593160602382971 7 30.969282195351518 30.34911561860901 19.438238803250247 19.243363382789234 8 28.57722815117371 32.482417084921316 18.79968190225125 20.140672861653716 9 27.167064765903813 15.32946826440659 18.858072970707624 38.64539399898197 10 17.552400547846137 26.53101384451646 29.725017877511263 26.19156773012615 11 36.5920701685088 21.782993219671113 21.65709940459238 19.967837207227706 12 25.231405617087212 23.63900866849759 27.270179385567577 23.85940632884762 13 29.20450279098812 19.741834195126348 24.890027769151104 26.16363524473443 14 24.121379002400044 19.653603573304405 24.734389810949374 31.490627613346177 15 25.466758832960995 26.565383923660356 22.117573087823697 25.850284155554952 16 25.97948423152931 26.00059393400177 23.16686086797849 24.853060966490435 17 24.321215755475 26.15137502856344 24.453931402897897 25.073477813063665 18 24.926331296163692 25.242473436570496 25.443145220729424 24.388050046536392 19 25.750461189260047 24.935299929253304 25.231906520860736 24.08233236062591 20 26.24573932415961 24.222893276182432 24.724156272883615 24.807211126774337 21 26.91409734711694 24.052027230096222 24.475839729798064 24.558035692988774 22 26.294013341214217 24.087484513725002 24.77961426593029 24.83888787913049 23 24.90080903192382 24.17597672751143 25.27324326915875 25.649970971406 24 24.791645994260065 24.777525150367904 25.23366180197234 25.19716705339969 25 25.208817441390625 24.282597775317253 25.20113690953526 25.30744787375686 26 24.789643364523076 25.111439641790245 25.452485018142333 24.646431975544342 27 25.352476176596234 24.646510086916575 24.844844649057546 25.156169087429642 28 25.029684964881337 24.55632367273978 25.284267230995063 25.129724131383817 29 24.90183441202975 24.732504437785842 25.29425823739399 25.071402912790415 30 24.93878759240897 24.683538114130698 25.424384160840802 24.95329013261953 31 25.380276590380372 24.49090725642465 24.704936946753048 25.423879206441928 32 25.314378698958784 24.585344514210966 24.61136781926135 25.488908967568904 33 24.842053892139866 24.442617863563473 25.053340428693655 25.661987815603005 34 25.429821793221365 24.585909139373676 25.138602754475563 24.845666312929396 35 25.72818498190778 24.32409998067937 25.20855546094013 24.739159576472723 36 24.867391436055694 24.767353605822326 24.929670590738414 25.435584367383562 37 25.56574000063449 24.604320116135593 24.837817343579637 24.99212253965028 38 24.994645100135436 24.50006225518328 25.10050276427325 25.40478988040803 39 25.694453223560064 24.47310000789524 24.541724201346295 25.290722567198397 40 25.714205978506914 24.59676015130171 24.832924579562437 24.85610929062894 41 24.962604764502448 24.99313635527704 25.169074647115636 24.87518423310488 42 25.859930771878524 24.828617343478776 24.785227517498456 24.52622436714424 43 25.5682525658133 24.21491814157498 24.866527138964916 25.35030215364681 44 25.03521371174825 24.76328394786677 24.791645745169845 25.409856595215135 45 25.248758147328747 24.844161652543637 24.75299505644243 25.154085143685183 46 25.228154858112244 24.669467656156673 24.759322266769203 25.343055218961872 47 25.245785503443752 24.691684307820747 25.023310176212764 25.039220012522733 48 25.61649995050396 25.232124477160863 24.25389199845906 24.897483573876112 49 25.19587333770648 25.08920031009601 24.340175323513627 25.374751028683878 50 25.371999353106826 25.189404691311264 24.419549340631715 25.019046614950195 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 125.0 1 101.0 2 77.0 3 228.0 4 379.0 5 426.5 6 474.0 7 480.5 8 487.0 9 643.0 10 799.0 11 1307.0 12 1815.0 13 3325.0 14 4835.0 15 6564.0 16 8293.0 17 8337.5 18 8382.0 19 7867.0 20 7352.0 21 8166.5 22 8981.0 23 10863.5 24 12746.0 25 16074.0 26 19402.0 27 24037.5 28 28673.0 29 34200.5 30 39728.0 31 47499.5 32 55271.0 33 65147.0 34 75023.0 35 89006.5 36 102990.0 37 121171.0 38 139352.0 39 157674.0 40 175996.0 41 193782.0 42 211568.0 43 223800.0 44 236032.0 45 258346.0 46 280660.0 47 298475.5 48 316291.0 49 330102.5 50 343914.0 51 337222.0 52 330530.0 53 328097.0 54 325664.0 55 324689.0 56 323714.0 57 311169.0 58 298624.0 59 272283.5 60 245943.0 61 216546.5 62 187150.0 63 160098.0 64 133046.0 65 112207.5 66 91369.0 67 77312.0 68 63255.0 69 54678.0 70 46101.0 71 35426.0 72 24751.0 73 21249.5 74 17748.0 75 13200.5 76 8653.0 77 7358.0 78 6063.0 79 5228.5 80 4394.0 81 3469.5 82 2545.0 83 2135.0 84 1725.0 85 1299.0 86 873.0 87 614.0 88 355.0 89 229.5 90 104.0 91 71.0 92 38.0 93 42.5 94 47.0 95 45.0 96 43.0 97 36.5 98 30.0 99 21.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032296367111898566 2 0.004102640430758163 3 1.9082048515154247E-4 4 9.541024257577123E-5 5 4.770512128788562E-5 6 1.4311536386365684E-4 7 0.0 8 0.0 9 0.0 10 9.541024257577123E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 8.825447438258839E-4 17 0.0 18 9.541024257577123E-5 19 0.0 20 2.862307277273137E-4 21 4.770512128788562E-5 22 0.0 23 9.541024257577123E-5 24 9.063973044698267E-4 25 9.541024257577123E-5 26 4.293460915909706E-4 27 2.623781670833709E-4 28 0.0015265638812123397 29 3.8164097030308493E-4 30 0.001264185714128969 31 3.100832883712565E-4 32 6.20166576742513E-4 33 2.623781670833709E-4 34 0.0010733652289774264 35 2.862307277273137E-4 36 1.9082048515154247E-4 37 0.0019320574121593674 38 0.0 39 5.486088948106847E-4 40 9.541024257577123E-5 41 0.0010256601076895407 42 0.004651249325568848 43 0.004388871158485477 44 0.003887967384962678 45 0.002313698382462452 46 0.002242140700530624 47 0.001121070350265312 48 0.003983377627538449 49 0.004102640430758163 50 0.0018127946089396534 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 4192422.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.990040662935925 #Duplication Level Percentage of deduplicated Percentage of total 1 71.38047916294187 34.2555209756943 2 15.809481994563182 15.173953675580806 3 5.478360068319843 7.88720167334621 4 2.4374494492338425 4.678931927303315 5 1.2387386655845347 2.97235594660764 6 0.7618677648442345 2.193723900879295 7 0.5199243693296157 1.7465834138045704 8 0.35076900199163624 1.346673493510086 9 0.2813092579404905 1.2150038454682024 >10 1.5715940507638595 13.695661536525611 >50 0.09799706327872171 3.2197817330589595 >100 0.06004694691602914 5.679112853847014 >500 0.007838358771614434 2.592650617481739 >1k 0.0041438455206410435 3.3428444068922634 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6696792450759967E-4 2 0.0 0.0 0.0 2.385256064394281E-5 1.6696792450759967E-4 3 0.0 0.0 0.0 2.385256064394281E-5 1.9082048515154247E-4 4 0.0 0.0 0.0 2.385256064394281E-5 1.9082048515154247E-4 5 0.0 0.0 0.0 2.385256064394281E-5 2.146730457954853E-4 6 7.155768193182842E-5 0.0 0.0 2.385256064394281E-5 2.385256064394281E-4 7 7.155768193182842E-5 0.0 0.0 2.385256064394281E-5 2.385256064394281E-4 8 7.155768193182842E-5 0.0 0.0 2.385256064394281E-5 2.385256064394281E-4 9 7.155768193182842E-5 0.0 0.0 2.385256064394281E-5 2.385256064394281E-4 10 7.155768193182842E-5 0.0 0.0 7.155768193182842E-5 2.385256064394281E-4 11 7.155768193182842E-5 0.0 0.0 7.155768193182842E-5 3.100832883712565E-4 12 7.155768193182842E-5 0.0 0.0 9.541024257577123E-5 6.917242586743415E-4 13 7.155768193182842E-5 0.0 0.0 9.541024257577123E-5 8.348396225379983E-4 14 7.155768193182842E-5 0.0 0.0 9.541024257577123E-5 8.348396225379983E-4 15 7.155768193182842E-5 0.0 0.0 1.1926280321971405E-4 0.0011449229109092547 16 9.541024257577123E-5 0.0 0.0 1.4311536386365684E-4 0.001240333153485026 17 9.541024257577123E-5 0.0 0.0 1.4311536386365684E-4 0.001264185714128969 18 9.541024257577123E-5 0.0 0.0 1.6696792450759967E-4 0.0013118908354168544 19 9.541024257577123E-5 0.0 0.0 1.6696792450759967E-4 0.0013118908354168544 20 9.541024257577123E-5 0.0 0.0 2.385256064394281E-4 0.0014073010779926257 21 9.541024257577123E-5 0.0 0.0 2.385256064394281E-4 0.0014550061992805114 22 9.541024257577123E-5 0.0 0.0 3.5778840965914216E-4 0.0015265638812123397 23 9.541024257577123E-5 0.0 0.0 3.8164097030308493E-4 0.0015265638812123397 24 9.541024257577123E-5 0.0 0.0 5.963140160985702E-4 0.0015265638812123397 25 9.541024257577123E-5 0.0 0.0 6.917242586743415E-4 0.0015265638812123397 26 9.541024257577123E-5 0.0 0.0 8.109870618940555E-4 0.0016935318057199394 27 9.541024257577123E-5 0.0 0.0 9.302498651137695E-4 0.0018127946089396534 28 9.541024257577123E-5 0.0 0.0 0.0015504164418562827 0.0018127946089396534 29 9.541024257577123E-5 0.0 0.0 0.0025522239889018807 0.0018127946089396534 30 9.541024257577123E-5 0.0 0.0 0.004579691643637019 0.0018127946089396534 31 9.541024257577123E-5 0.0 0.0 0.008992415362766439 0.00195590997280331 32 9.541024257577123E-5 0.0 0.0 0.0142638312650778 0.0019797625334472533 33 9.541024257577123E-5 0.0 0.0 0.01977377277382859 0.0019797625334472533 34 9.541024257577123E-5 0.0 0.0 0.025593797570950635 0.00212287789731091 35 9.541024257577123E-5 0.0 0.0 0.032487187597050105 0.0021467304579548528 36 9.541024257577123E-5 0.0 0.0 0.04152730808110443 0.0021467304579548528 37 9.541024257577123E-5 0.0 0.0 0.05726999810610668 0.0021467304579548528 38 9.541024257577123E-5 0.0 0.0 0.07513556602841985 0.0022182881398866813 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3055 0.0 27.515884 1 GTATCAA 6705 0.0 25.763344 1 TCAACGC 10030 0.0 17.06419 4 ATCAACG 10110 0.0 16.950922 3 TATCAAC 10260 0.0 16.853598 2 ACCGTCG 1005 0.0 16.417318 8 CAACGCA 10480 0.0 16.352465 5 AACGCAG 10530 0.0 16.29571 6 TAGGACG 405 0.0 16.29571 4 ATACCGT 1125 0.0 16.230526 6 GTATTAG 695 0.0 16.147924 1 TACCGTC 1055 0.0 15.639246 7 CGTCGTA 1100 0.0 15.199634 10 CCGTCGT 1110 0.0 14.864329 9 CGAGCCG 1290 0.0 14.325236 15 GTATACG 190 1.7507409E-7 13.898213 1 ACGCAGA 12570 0.0 13.651059 7 CGCAGAG 12955 0.0 13.313299 8 TTACCGC 1195 0.0 13.2549095 16 AGAGTAC 13225 0.0 13.108191 11 >>END_MODULE