##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062289_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2199319 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25929981053226 32.0 32.0 32.0 32.0 32.0 2 31.365493591425345 32.0 32.0 32.0 32.0 32.0 3 31.522288035523722 32.0 32.0 32.0 32.0 32.0 4 31.60870705886686 32.0 32.0 32.0 32.0 32.0 5 31.569345783854 32.0 32.0 32.0 32.0 32.0 6 35.201062692588025 36.0 36.0 36.0 36.0 36.0 7 35.209607610355754 36.0 36.0 36.0 36.0 36.0 8 35.145956998507266 36.0 36.0 36.0 36.0 36.0 9 35.25021654430303 36.0 36.0 36.0 36.0 36.0 10 35.10871774399257 36.0 36.0 36.0 36.0 36.0 11 35.24640763800067 36.0 36.0 36.0 36.0 36.0 12 35.1539694787341 36.0 36.0 36.0 36.0 36.0 13 35.20448875310949 36.0 36.0 36.0 36.0 36.0 14 35.15617698023797 36.0 36.0 36.0 36.0 36.0 15 35.128371100326966 36.0 36.0 36.0 36.0 36.0 16 35.146334842739954 36.0 36.0 36.0 36.0 36.0 17 35.1244808051947 36.0 36.0 36.0 36.0 36.0 18 35.12291532060606 36.0 36.0 36.0 36.0 36.0 19 35.11143858621691 36.0 36.0 36.0 36.0 36.0 20 35.11222382928534 36.0 36.0 36.0 36.0 36.0 21 35.09933847704676 36.0 36.0 36.0 36.0 36.0 22 35.085868398354215 36.0 36.0 36.0 36.0 36.0 23 35.05633380150856 36.0 36.0 36.0 36.0 36.0 24 35.032571900665616 36.0 36.0 36.0 36.0 36.0 25 35.020612744217644 36.0 36.0 36.0 36.0 36.0 26 34.9778831538308 36.0 36.0 36.0 36.0 36.0 27 34.968851721828436 36.0 36.0 36.0 36.0 36.0 28 34.944238648417986 36.0 36.0 36.0 32.0 36.0 29 34.91763814162475 36.0 36.0 36.0 32.0 36.0 30 34.90537707353958 36.0 36.0 36.0 32.0 36.0 31 34.90278581688241 36.0 36.0 36.0 32.0 36.0 32 34.877488440740066 36.0 36.0 36.0 32.0 36.0 33 34.85378064755499 36.0 36.0 36.0 32.0 36.0 34 34.83452832444952 36.0 36.0 36.0 32.0 36.0 35 34.82366587111738 36.0 36.0 36.0 32.0 36.0 36 34.80006038232744 36.0 36.0 36.0 32.0 36.0 37 34.79379662522808 36.0 36.0 36.0 32.0 36.0 38 34.77723149756811 36.0 36.0 36.0 32.0 36.0 39 34.75316859446038 36.0 36.0 36.0 32.0 36.0 40 34.75086469948197 36.0 36.0 36.0 32.0 36.0 41 34.71869792422109 36.0 36.0 36.0 32.0 36.0 42 34.68436229578337 36.0 36.0 36.0 32.0 36.0 43 34.68509934211453 36.0 36.0 36.0 32.0 36.0 44 34.6193362581781 36.0 36.0 36.0 32.0 36.0 45 34.613374412715935 36.0 36.0 36.0 32.0 36.0 46 34.59028453807747 36.0 36.0 36.0 32.0 36.0 47 34.56686456125737 36.0 36.0 36.0 32.0 36.0 48 34.54216964433081 36.0 36.0 36.0 32.0 36.0 49 34.51997413744891 36.0 36.0 36.0 32.0 36.0 50 34.08226273678352 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 6.0 21 41.0 22 125.0 23 348.0 24 937.0 25 2310.0 26 5108.0 27 10134.0 28 17564.0 29 28648.0 30 44263.0 31 66222.0 32 101894.0 33 174896.0 34 395305.0 35 1351514.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.96031687192449 17.787363601755104 11.831301222541262 26.42101830377915 2 16.31373108932663 19.657415057422607 36.854731743649225 27.174122109601534 3 18.68995573621787 22.9379602285257 28.33232165469703 30.039762380559402 4 12.52642295183191 15.44387148931101 35.16038373696585 36.86932182189123 5 14.849532695407433 36.412064665589064 32.812762155489324 15.925640483514186 6 35.433048668812184 35.03256015284766 15.949518804499949 13.584872373840206 7 31.17978792526232 30.05894097218275 19.822226789292504 18.939044313262425 8 28.379739364776096 33.15080713620898 18.650364044506503 19.81908945450842 9 26.91187590340465 14.100319235181436 18.5392387370818 40.448566124332125 10 16.278273537523905 26.486710880372915 30.79149991042678 26.443515671676405 11 38.090154270480994 21.00241029154934 21.325692180170318 19.581743257799346 12 24.357585234338448 23.669008452161783 28.371054858344785 23.60235145515498 13 29.27947241850773 19.313660273930246 25.085446904246268 26.321420403315756 14 23.503138926185787 19.28365098469117 24.693962085536477 32.51924800358657 15 25.428462173972942 27.035959767546224 21.755688920070256 25.77988913841057 16 26.11388800350657 25.93183015876408 23.08383436373648 24.870447473992876 17 24.107007669192146 26.20947666072998 24.7881275976791 24.895388072398774 18 24.973343997250055 25.124572765090253 25.658465787333068 24.243617450326624 19 25.70536607013353 24.817182045896935 25.06775961104324 24.4096922729263 20 25.961824390376982 24.090692080698037 24.626360085663233 25.32112344326175 21 26.887095505472374 24.14015429321531 24.362950531505433 24.609799669806883 22 26.13004298148654 24.284289818803 25.001875580577444 24.583791619133013 23 24.566377137650335 24.338579351153697 25.47320329611121 25.621840215084763 24 24.839824253411194 24.83532282727755 25.175476048548106 25.149376870763145 25 25.03270336445666 24.288198825543407 25.157651359627884 25.52144645037205 26 24.67299986222958 25.38772370074082 25.416187160433427 24.52308927659617 27 25.300230799869777 24.789888455823377 24.98108495945088 24.928795784855964 28 24.8628644595241 24.443318825581418 25.635661424354474 25.058155290540014 29 24.69800714497794 24.802449135113925 25.551275924643534 24.9482677952646 30 24.601634067613425 24.96147632629881 25.65915381142247 24.777735794665297 31 25.236062781537292 24.748182269976617 24.71649049769723 25.29926445078886 32 25.10665927641292 24.628232800268083 24.73808628500159 25.527021638317404 33 24.57450329921357 24.595282524716822 25.352019176906232 25.47819499916337 34 25.191196503627506 24.567864073608607 25.512024691402935 24.728914731360955 35 25.78565478658781 24.245036629636903 25.403035130986417 24.566273452788874 36 24.53334291208209 25.11834377371479 24.939833484365344 25.40847982983777 37 25.53583494219467 24.774630583309616 25.013936391852237 24.675598082643486 38 24.70119159612589 24.50226638336685 25.41241175109204 25.384130269415216 39 25.621426129088583 24.473649749738097 24.716136436386915 25.188787684786405 40 25.62683239122053 24.63315800577635 25.14281739016565 24.597192212837466 41 24.660152148895122 25.31113407808782 25.415940486329013 24.61277328668804 42 25.846397150969167 25.06693330859711 24.955802190247017 24.130867350186705 43 25.240344719555008 24.361039760607884 25.22806773440061 25.170547785436494 44 24.6422486487273 25.03570579245488 24.94030846348915 25.381737095328667 45 24.887747098475636 25.248047652067157 24.86705846244785 24.997146787009356 46 24.923917763434602 24.96420394995601 24.816654655077947 25.295223631531442 47 24.91075549210088 24.850281567502314 25.309610579753965 24.92935236064284 48 25.647476616815883 25.3840662413663 24.272722725681263 24.695734416136556 49 24.854063354555798 25.32645338712156 24.570238291193057 25.249244967129584 50 25.08643722229598 25.323605318821947 24.47869397494821 25.11126348393386 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 65.0 1 62.5 2 60.0 3 145.0 4 230.0 5 254.0 6 278.0 7 240.5 8 203.0 9 297.5 10 392.0 11 572.0 12 752.0 13 1472.5 14 2193.0 15 2781.0 16 3369.0 17 3653.5 18 3938.0 19 4019.5 20 4101.0 21 4861.0 22 5621.0 23 6571.0 24 7521.0 25 9518.5 26 11516.0 27 14711.5 28 17907.0 29 21357.5 30 24808.0 31 28795.0 32 32782.0 33 38731.5 34 44681.0 35 52082.0 36 59483.0 37 70315.5 38 81148.0 39 90170.0 40 99192.0 41 108290.5 42 117389.0 43 120975.0 44 124561.0 45 132729.0 46 140897.0 47 149474.0 48 158051.0 49 164933.0 50 171815.0 51 166169.0 52 160523.0 53 158813.5 54 157104.0 55 158064.5 56 159025.0 57 154972.0 58 150919.0 59 139716.5 60 128514.0 61 113161.0 62 97808.0 63 84684.0 64 71560.0 65 60911.5 66 50263.0 67 43571.5 68 36880.0 69 32636.0 70 28392.0 71 22449.0 72 16506.0 73 14193.0 74 11880.0 75 8960.0 76 6040.0 77 5098.5 78 4157.0 79 3505.5 80 2854.0 81 2259.0 82 1664.0 83 1383.5 84 1103.0 85 909.5 86 716.0 87 493.5 88 271.0 89 173.5 90 76.0 91 59.0 92 42.0 93 31.5 94 21.0 95 22.0 96 23.0 97 18.0 98 13.0 99 12.5 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03191897128156489 2 0.004455924765802506 3 1.8187448023683695E-4 4 0.0 5 1.8187448023683695E-4 6 2.2734310029604618E-4 7 0.0 8 0.0 9 0.0 10 4.546862005920924E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 8.184351610657663E-4 17 0.0 18 9.093724011841848E-5 19 0.0 20 4.092175805328831E-4 21 0.0 22 0.0 23 0.0 24 7.274979209473478E-4 25 1.8187448023683695E-4 26 3.637489604736739E-4 27 5.001548206513015E-4 28 0.0015914017020723233 29 5.456234407105109E-4 30 0.001000309641302603 31 4.5468620059209235E-4 32 0.0011821841215394402 33 3.182803404144646E-4 34 5.001548206513015E-4 35 3.182803404144646E-4 36 2.7281172035525545E-4 37 0.0018642134224275786 38 0.0 39 0.0010457782613618124 40 3.182803404144646E-4 41 0.0011821841215394402 42 0.005228891306809062 43 0.003728426844855157 44 0.004364987525684087 45 0.002000619282605206 46 0.0024553054831972987 47 0.0010912468814210218 48 0.004046707185269622 49 0.003501083744559111 50 0.0015914017020723233 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2199319.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.001219785463846 #Duplication Level Percentage of deduplicated Percentage of total 1 66.16434218035103 27.789830778775592 2 15.929151268491907 13.380875668476575 3 6.856466564666628 8.639398774027418 4 3.4944506252360616 5.870847549599654 5 2.0853608031563713 4.379384871268107 6 1.3447169795291762 3.388785204387 7 0.8804542472555534 2.5886106645017937 8 0.62700498116971 2.106797921655169 9 0.4531033156839311 1.712780275280688 >10 1.965761773455697 14.043700321976615 >50 0.10303624829680004 2.99591482107375 >100 0.08080123008337493 6.9554242430024695 >500 0.010777506948573639 3.120211536870331 >1k 0.004572275675152446 3.0274373691049417 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3059 0.13908850876112105 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2510 0.11412623634861518 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2509 0.11408076772855599 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2322 0.10557813577748384 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2278 0.10357751649487865 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2256 0.10257720685357603 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 4.546862005920924E-5 18 0.0 0.0 0.0 0.0 4.546862005920924E-5 19 0.0 0.0 0.0 4.546862005920924E-5 4.546862005920924E-5 20 0.0 0.0 0.0 4.546862005920924E-5 4.546862005920924E-5 21 0.0 0.0 0.0 4.546862005920924E-5 4.546862005920924E-5 22 0.0 0.0 0.0 2.2734310029604618E-4 4.546862005920924E-5 23 0.0 0.0 0.0 4.5468620059209235E-4 4.546862005920924E-5 24 0.0 0.0 0.0 6.365606808289294E-4 4.546862005920924E-5 25 0.0 0.0 0.0 7.729665410065571E-4 4.546862005920924E-5 26 0.0 4.546862005920924E-5 0.0 9.093724011841847E-4 4.546862005920924E-5 27 0.0 4.546862005920924E-5 0.0 0.0010457782613618124 4.546862005920924E-5 28 0.0 4.546862005920924E-5 0.0 0.0013185899817170679 4.546862005920924E-5 29 0.0 4.546862005920924E-5 0.0 0.0026371799634341358 4.546862005920924E-5 30 0.0 4.546862005920924E-5 0.0 0.004274050285565668 4.546862005920924E-5 31 0.0 4.546862005920924E-5 0.0 0.009184661251960265 4.546862005920924E-5 32 0.0 4.546862005920924E-5 0.0 0.01491370737942063 4.546862005920924E-5 33 0.0 4.546862005920924E-5 0.0 0.01977884972575602 4.546862005920924E-5 34 0.0 4.546862005920924E-5 0.0 0.02614445653404531 4.546862005920924E-5 35 0.0 4.546862005920924E-5 0.0 0.033192092643222745 4.546862005920924E-5 36 0.0 4.546862005920924E-5 0.0 0.04205847355476854 4.546862005920924E-5 37 0.0 4.546862005920924E-5 0.0 0.05651749473359708 4.546862005920924E-5 38 0.0 4.546862005920924E-5 0.0 0.07475041137733998 4.546862005920924E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3210 0.0 26.188696 1 GGTATCA 1370 0.0 22.488632 1 TAGGACG 290 0.0 21.999228 4 TTAGTAC 170 0.0 20.705154 3 CGCAATA 550 0.0 19.999752 36 TACGAAT 585 0.0 19.179684 41 AACGCAG 4550 0.0 18.61473 6 TCAACGC 4600 0.0 18.412395 4 TCTAGCG 610 0.0 18.39405 28 TCGCATG 60 0.0074145156 18.333107 11 ATCAACG 4620 0.0 18.33269 3 CAACGCA 4690 0.0 18.059067 5 ATACGAA 615 0.0 17.885958 40 CAATACG 625 0.0 17.599781 38 ATACCGT 700 0.0 17.59938 6 TACCGTC 730 0.0 17.478836 7 TATCAAC 4950 0.0 17.422403 2 TATGCCG 90 2.2166202E-4 17.110899 29 CGTCGTA 720 0.0 17.110899 10 AATACGA 645 0.0 17.054052 39 >>END_MODULE