##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062287_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3062787 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.295730653160014 32.0 32.0 32.0 32.0 32.0 2 31.483734912026204 32.0 32.0 32.0 32.0 32.0 3 31.57854496574525 32.0 32.0 32.0 32.0 32.0 4 31.654209385112317 32.0 32.0 32.0 32.0 32.0 5 31.63608471630577 32.0 32.0 32.0 32.0 32.0 6 35.2678697539202 36.0 36.0 36.0 36.0 36.0 7 35.26517025180008 36.0 36.0 36.0 36.0 36.0 8 35.22937801420732 36.0 36.0 36.0 36.0 36.0 9 35.290634967433256 36.0 36.0 36.0 36.0 36.0 10 35.18451103521074 36.0 36.0 36.0 36.0 36.0 11 35.2987955087964 36.0 36.0 36.0 36.0 36.0 12 35.22158968286074 36.0 36.0 36.0 36.0 36.0 13 35.255370027363966 36.0 36.0 36.0 36.0 36.0 14 35.212902823474174 36.0 36.0 36.0 36.0 36.0 15 35.19984837339325 36.0 36.0 36.0 36.0 36.0 16 35.20700427421169 36.0 36.0 36.0 36.0 36.0 17 35.189407229428625 36.0 36.0 36.0 36.0 36.0 18 35.186639488805454 36.0 36.0 36.0 36.0 36.0 19 35.17385244223643 36.0 36.0 36.0 36.0 36.0 20 35.17626854234395 36.0 36.0 36.0 36.0 36.0 21 35.162763522242976 36.0 36.0 36.0 36.0 36.0 22 35.15075550470862 36.0 36.0 36.0 36.0 36.0 23 35.12148020740587 36.0 36.0 36.0 36.0 36.0 24 35.10796082130425 36.0 36.0 36.0 36.0 36.0 25 35.08967910599072 36.0 36.0 36.0 36.0 36.0 26 35.04860083316274 36.0 36.0 36.0 36.0 36.0 27 35.03763500367476 36.0 36.0 36.0 36.0 36.0 28 35.01519465767616 36.0 36.0 36.0 36.0 36.0 29 34.99890916345146 36.0 36.0 36.0 36.0 36.0 30 34.982942333240935 36.0 36.0 36.0 36.0 36.0 31 34.982480335720375 36.0 36.0 36.0 36.0 36.0 32 34.96000178922008 36.0 36.0 36.0 36.0 36.0 33 34.92927226085261 36.0 36.0 36.0 32.0 36.0 34 34.922466368049754 36.0 36.0 36.0 36.0 36.0 35 34.90695141385934 36.0 36.0 36.0 36.0 36.0 36 34.88824296302681 36.0 36.0 36.0 32.0 36.0 37 34.87940068963333 36.0 36.0 36.0 32.0 36.0 38 34.86155713733929 36.0 36.0 36.0 32.0 36.0 39 34.84232857198362 36.0 36.0 36.0 32.0 36.0 40 34.82598789925646 36.0 36.0 36.0 32.0 36.0 41 34.801629365672504 36.0 36.0 36.0 32.0 36.0 42 34.76589459208231 36.0 36.0 36.0 32.0 36.0 43 34.756641255170535 36.0 36.0 36.0 32.0 36.0 44 34.708252320517225 36.0 36.0 36.0 32.0 36.0 45 34.685991549526626 36.0 36.0 36.0 32.0 36.0 46 34.663020641004415 36.0 36.0 36.0 32.0 36.0 47 34.62920536099964 36.0 36.0 36.0 32.0 36.0 48 34.59906353265833 36.0 36.0 36.0 32.0 36.0 49 34.58608744258089 36.0 36.0 36.0 32.0 36.0 50 34.17926222097717 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 13.0 20 45.0 21 128.0 22 281.0 23 774.0 24 1904.0 25 4116.0 26 8519.0 27 15504.0 28 26203.0 29 40372.0 30 58855.0 31 84592.0 32 124855.0 33 205913.0 34 466364.0 35 2024346.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.35015350447449 18.17662812724541 12.77124567248024 25.701972695799856 2 16.352621419074413 20.04531420197635 36.48296097192727 27.11910340702197 3 18.70187995688888 23.559716767397497 28.196153628905474 29.54224964680815 4 13.189163986917798 16.05207936431753 34.41584413150506 36.342912517259606 5 15.271254579570828 35.94232964943367 32.10330982859729 16.683105942398214 6 34.69541743421504 34.28170859042531 16.44704063168714 14.575833343672517 7 30.995070829280653 30.146856441535114 19.659741274858487 19.19833145432575 8 28.92528928717537 31.885338418897557 18.76646988510791 20.42290240881916 9 27.551148676026116 14.592265149355798 18.575140876593768 39.281445298024316 10 17.521269850391114 26.007791598890684 29.457363328681797 27.01357522203641 11 37.0387166982229 21.46995530541301 21.565228009652646 19.92609998671145 12 25.38695161855905 23.28468263861726 27.285190672805737 24.04317507001795 13 29.342229805729225 19.41421326393249 24.937614009723823 26.305942920614463 14 24.53128474164217 19.187752853855002 24.388343035281267 31.892619369221563 15 25.694898143422968 26.110206161904177 22.038293880704078 26.156601813968784 16 26.247523074707885 25.567354247088176 22.868979018659257 25.316143659544682 17 24.45001888802584 25.642168391076492 24.312790931919196 25.595021788978467 18 25.269778975670835 24.665165853953184 25.38536005628864 24.67969511408734 19 26.048922109177035 24.369699884451645 25.1042269671381 24.47715103923322 20 26.587701291997423 23.497140013784875 24.54076806767192 25.37439062654578 21 27.444303142401445 23.48503078080897 24.289396741854226 24.78126933493536 22 26.82070284352128 23.406067741570013 24.655909797187984 25.117319617720725 23 25.103272055750587 23.598268764627214 25.28075763749582 26.01770154212638 24 25.133670284318722 24.191676788256345 25.164002403061293 25.510650524363648 25 25.437307384768793 23.63413986718589 25.18195088966647 25.74660185837885 26 25.08232732810191 24.65604709978601 25.352507236903538 24.90911833520854 27 25.64487333696403 24.066662487446013 24.707650455208547 25.580813720381407 28 25.288834224745592 23.883362071189126 25.3578573194029 25.46994638466238 29 25.088432904288727 24.180726361135363 25.249887846768974 25.480952887806936 30 25.086523718600052 24.35727569787093 25.365423946630866 25.190776636898153 31 25.57798150759557 24.016682931894024 24.58835479374723 25.81698076676317 32 25.57931408272277 24.09970092335018 24.37562851806867 25.94535647585838 33 24.96333396456814 23.877065933563628 24.988441873069565 26.171158228798674 34 25.707016834146163 24.0440739293246 25.02831593564373 25.220593300885508 35 26.094578190126743 23.69303292631722 25.184162874357853 25.028226009198185 36 25.104178196221017 24.417743220948545 24.656839649978238 25.821238932852204 37 26.01397249709491 24.185898141234084 24.673763383072167 25.12636597859884 38 25.27900242491561 24.05172152030161 24.80495705382059 25.864319000962194 39 25.999114524732903 23.95151827011044 24.28562846215279 25.763738743003863 40 25.89927987086259 24.20660418756269 24.746635740554996 25.14748020101973 41 25.0541667591757 24.687047385955953 24.97521846280027 25.28356739206808 42 26.3097953233082 24.52629843255889 24.575373820256086 24.588532423876824 43 25.950605569746234 23.6901144204061 24.641838301629342 25.71744170821833 44 25.29404946345748 24.35330014872668 24.464510483516808 25.888139904299035 45 25.453503596488076 24.521192016220926 24.48994517926934 25.535359208021653 46 25.376340926269663 24.408768037509205 24.42179569434309 25.793095341878043 47 25.546403304736 24.317281559484332 24.8902948847378 25.246020251041873 48 26.145776806080423 24.91300108858837 23.753592439567672 25.187629665763538 49 25.41343092157677 24.989127112866445 23.894328597586938 25.70311336796984 50 25.660276080129712 25.032732192870817 23.955949161762007 25.351042565237464 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 243.0 1 175.5 2 108.0 3 258.5 4 409.0 5 481.0 6 553.0 7 518.5 8 484.0 9 669.0 10 854.0 11 1271.5 12 1689.0 13 3117.0 14 4545.0 15 6239.0 16 7933.0 17 8059.5 18 8186.0 19 7811.0 20 7436.0 21 7650.0 22 7864.0 23 8831.5 24 9799.0 25 11277.0 26 12755.0 27 15873.5 28 18992.0 29 22636.0 30 26280.0 31 31425.5 32 36571.0 33 42486.0 34 48401.0 35 56203.5 36 64006.0 37 77937.0 38 91868.0 39 104299.0 40 116730.0 41 129459.5 42 142189.0 43 149790.5 44 157392.0 45 176052.0 46 194712.0 47 209491.0 48 224270.0 49 234106.0 50 243942.0 51 240688.5 52 237435.0 53 240102.5 54 242770.0 55 244502.5 56 246235.0 57 239516.0 58 232797.0 59 214290.0 60 195783.0 61 173178.5 62 150574.0 63 129727.5 64 108881.0 65 91720.0 66 74559.0 67 63304.5 68 52050.0 69 45090.5 70 38131.0 71 29362.5 72 20594.0 73 17372.0 74 14150.0 75 10407.0 76 6664.0 77 5959.5 78 5255.0 79 4381.5 80 3508.0 81 2843.0 82 2178.0 83 1902.5 84 1627.0 85 1230.0 86 833.0 87 561.5 88 290.0 89 194.5 90 99.0 91 75.5 92 52.0 93 43.0 94 34.0 95 32.5 96 31.0 97 31.0 98 31.0 99 23.0 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03222555143403704 2 0.005583150248450186 3 1.3060000581170027E-4 4 0.0 5 0.0 6 1.6325000726462533E-4 7 0.0 8 0.0 9 0.0 10 3.265000145292507E-5 11 0.0 12 3.265000145292507E-5 13 0.0 14 0.0 15 0.0 16 5.877000261526511E-4 17 0.0 18 6.530000290585014E-5 19 0.0 20 3.2650001452925065E-4 21 6.530000290585014E-5 22 0.0 23 9.795000435877519E-5 24 8.815500392289768E-4 25 3.2650001452925065E-4 26 4.2445001888802584E-4 27 4.897500217938759E-4 28 0.001436600063928703 29 4.2445001888802584E-4 30 0.0014039500624757778 31 5.224000232468011E-4 32 8.815500392289768E-4 33 2.2855001017047546E-4 34 7.836000348702015E-4 35 2.9385001307632557E-4 36 1.9590000871755038E-4 37 0.0018284000813638037 38 0.0 39 8.162500363231265E-4 40 9.795000435877519E-5 41 7.509500334172764E-4 42 0.00496280022084461 43 0.0043751001946919586 44 0.003983300177256858 45 0.00251405011187523 46 0.0023508001046106046 47 0.001012150045040677 48 0.0034282501525571317 49 0.004015950178709783 50 0.0017304500770050284 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3062787.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.39382317394538 #Duplication Level Percentage of deduplicated Percentage of total 1 64.32746438083768 25.341047570469893 2 17.06231261295103 13.442994520263413 3 7.2264056959846945 8.540272445124383 4 3.630197029918075 5.720293595326975 5 2.0516324877943664 4.041082372104646 6 1.2666326780765043 2.9938502247892016 7 0.8461855256623969 2.3334138079207545 8 0.5926954865657108 1.86788329550121 9 0.44484146404023106 1.577160537735586 >10 2.3051054693631947 16.133895223990315 >50 0.14217438596574528 3.8262410640140354 >100 0.08594178366543737 6.790970387787853 >500 0.011912999466296204 3.2181084526234276 >1k 0.006497999708702629 4.172786502348114 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 3620 0.11819300525958874 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 3482 0.11368730505908507 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3219 0.10510035467696578 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 3161 0.10320665459269612 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.2855001017047546E-4 2 0.0 6.530000290585012E-5 0.0 0.0 2.2855001017047546E-4 3 0.0 6.530000290585012E-5 0.0 0.0 2.2855001017047546E-4 4 0.0 6.530000290585012E-5 0.0 0.0 2.2855001017047546E-4 5 0.0 6.530000290585012E-5 0.0 0.0 2.2855001017047546E-4 6 0.0 6.530000290585012E-5 0.0 0.0 2.9385001307632557E-4 7 0.0 6.530000290585012E-5 0.0 0.0 2.9385001307632557E-4 8 0.0 6.530000290585012E-5 0.0 0.0 2.9385001307632557E-4 9 0.0 6.530000290585012E-5 0.0 0.0 2.9385001307632557E-4 10 0.0 1.6325000726462533E-4 0.0 0.0 2.9385001307632557E-4 11 0.0 1.6325000726462533E-4 0.0 0.0 3.2650001452925065E-4 12 0.0 1.9590000871755038E-4 0.0 0.0 9.142000406819019E-4 13 0.0 1.9590000871755038E-4 0.0 0.0 9.79500043587752E-4 14 0.0 1.9590000871755038E-4 0.0 0.0 0.001012150045040677 15 0.0 1.9590000871755038E-4 0.0 0.0 0.0011754000523053023 16 0.0 2.2855001017047546E-4 0.0 3.265000145292506E-5 0.0013386500595699276 17 0.0 2.2855001017047546E-4 0.0 3.265000145292506E-5 0.0013713000610228528 18 0.0 2.2855001017047546E-4 0.0 9.795000435877519E-5 0.001436600063928703 19 0.0 2.2855001017047546E-4 0.0 1.9590000871755038E-4 0.001436600063928703 20 0.0 2.2855001017047546E-4 0.0 1.9590000871755038E-4 0.001436600063928703 21 0.0 2.2855001017047546E-4 0.0 1.9590000871755038E-4 0.0015019000668345529 22 0.0 2.2855001017047546E-4 0.0 2.612000116234005E-4 0.0015019000668345529 23 0.0 2.2855001017047546E-4 0.0 4.89750021793876E-4 0.0015019000668345529 24 0.0 2.2855001017047546E-4 0.0 6.856500305114264E-4 0.0015019000668345529 25 0.0 2.2855001017047546E-4 0.0 9.79500043587752E-4 0.0015019000668345529 26 0.0 2.2855001017047546E-4 0.0 0.0011427500508523773 0.0016651500740991782 27 0.0 2.2855001017047546E-4 0.0 0.0013386500595699276 0.0017304500770050284 28 0.0 2.2855001017047546E-4 0.0 0.0021222500944401293 0.0017304500770050284 29 0.0 2.2855001017047546E-4 0.0 0.003362950149651282 0.0017304500770050284 30 0.0 2.612000116234005E-4 0.0 0.005713750254261886 0.0017304500770050284 31 0.0 2.612000116234005E-4 0.0 0.011525450512882549 0.0017304500770050284 32 0.0 2.612000116234005E-4 0.0 0.016945350754068108 0.0018610500828167287 33 0.0 3.2650001452925065E-4 0.0 0.022920301019953394 0.0018610500828167287 34 0.0 3.2650001452925065E-4 0.0 0.028634051274215283 0.0018937000842696537 35 0.0 3.2650001452925065E-4 0.0 0.03539260157497077 0.0018937000842696537 36 0.0 3.2650001452925065E-4 0.0 0.04587325204135972 0.0018937000842696537 37 0.0 3.2650001452925065E-4 0.0 0.0613493527300462 0.0018937000842696537 38 0.0 3.2650001452925065E-4 0.0 0.08103730360616002 0.001959000087175504 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6005 0.0 25.765461 1 GGTATCA 2595 0.0 25.52847 1 TCAACGC 8870 0.0 17.336351 4 ATCAACG 8885 0.0 17.307085 3 TATCAAC 9095 0.0 17.22276 2 AACGCAG 8985 0.0 17.163431 6 CAACGCA 9160 0.0 16.787495 5 CGTAATC 110 5.627812E-5 15.999317 13 CGTCGTA 1020 0.0 15.097395 10 ATACCGT 980 0.0 14.815694 6 TACCGTC 1020 0.0 14.450364 7 ACGCAGA 10740 0.0 14.399758 7 CGCAGAG 10930 0.0 14.16957 8 ACCGTCG 1045 0.0 13.894144 8 AGAGTAC 11145 0.0 13.876483 11 TGTACGC 175 1.0540462E-6 13.828659 2 CAGAGTA 11200 0.0 13.827982 10 CCTACAC 495 0.0 13.777191 3 GTCCTAT 760 0.0 13.6106825 1 GTATAGG 490 0.0 13.474751 1 >>END_MODULE