##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062286_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 896066 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.257391754625218 32.0 32.0 32.0 32.0 32.0 2 31.431722663285964 32.0 32.0 32.0 32.0 32.0 3 31.56133699972993 32.0 32.0 32.0 32.0 32.0 4 31.64783062854745 32.0 32.0 32.0 32.0 32.0 5 31.614013923081558 32.0 32.0 32.0 32.0 32.0 6 35.25812607553461 36.0 36.0 36.0 36.0 36.0 7 35.25712168523301 36.0 36.0 36.0 36.0 36.0 8 35.21210825988264 36.0 36.0 36.0 36.0 36.0 9 35.28602357415637 36.0 36.0 36.0 36.0 36.0 10 35.173547484225494 36.0 36.0 36.0 36.0 36.0 11 35.29974354567632 36.0 36.0 36.0 36.0 36.0 12 35.21337490765189 36.0 36.0 36.0 36.0 36.0 13 35.25616416647881 36.0 36.0 36.0 36.0 36.0 14 35.2161459088951 36.0 36.0 36.0 36.0 36.0 15 35.191774936221215 36.0 36.0 36.0 36.0 36.0 16 35.200105795778434 36.0 36.0 36.0 36.0 36.0 17 35.183967475610054 36.0 36.0 36.0 36.0 36.0 18 35.181246693881924 36.0 36.0 36.0 36.0 36.0 19 35.172735044070414 36.0 36.0 36.0 36.0 36.0 20 35.16899090022387 36.0 36.0 36.0 36.0 36.0 21 35.16854338854504 36.0 36.0 36.0 36.0 36.0 22 35.14671687130189 36.0 36.0 36.0 36.0 36.0 23 35.11885508433531 36.0 36.0 36.0 36.0 36.0 24 35.09356900049773 36.0 36.0 36.0 36.0 36.0 25 35.079480752533854 36.0 36.0 36.0 36.0 36.0 26 35.047581316554805 36.0 36.0 36.0 36.0 36.0 27 35.03328326261681 36.0 36.0 36.0 36.0 36.0 28 35.01896958482969 36.0 36.0 36.0 36.0 36.0 29 34.99610184964054 36.0 36.0 36.0 36.0 36.0 30 34.97879843672229 36.0 36.0 36.0 36.0 36.0 31 34.98009186823292 36.0 36.0 36.0 36.0 36.0 32 34.94502079087924 36.0 36.0 36.0 36.0 36.0 33 34.92685137032317 36.0 36.0 36.0 32.0 36.0 34 34.909498853879064 36.0 36.0 36.0 32.0 36.0 35 34.906269181064786 36.0 36.0 36.0 32.0 36.0 36 34.88148864034569 36.0 36.0 36.0 32.0 36.0 37 34.86859561684072 36.0 36.0 36.0 32.0 36.0 38 34.85188925815732 36.0 36.0 36.0 32.0 36.0 39 34.83412940564646 36.0 36.0 36.0 32.0 36.0 40 34.823673702606726 36.0 36.0 36.0 32.0 36.0 41 34.80403898819953 36.0 36.0 36.0 32.0 36.0 42 34.76820903817353 36.0 36.0 36.0 32.0 36.0 43 34.7677057270335 36.0 36.0 36.0 32.0 36.0 44 34.71080701644745 36.0 36.0 36.0 32.0 36.0 45 34.708845107391646 36.0 36.0 36.0 32.0 36.0 46 34.680921941017736 36.0 36.0 36.0 32.0 36.0 47 34.659924603768026 36.0 36.0 36.0 32.0 36.0 48 34.63976649041477 36.0 36.0 36.0 32.0 36.0 49 34.61954588166497 36.0 36.0 36.0 32.0 36.0 50 34.197700839000696 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 8.0 21 22.0 22 51.0 23 157.0 24 383.0 25 978.0 26 2051.0 27 3942.0 28 6730.0 29 11293.0 30 16816.0 31 24849.0 32 38444.0 33 65114.0 34 146953.0 35 578271.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.957547943875056 17.98597211167387 11.840872886076713 26.215607058374367 2 16.387339136024714 19.598871008603595 36.869894790412275 27.143895064959416 3 18.871217760358366 22.796388200383234 28.3697686434994 29.962625395759 4 12.735111029767895 15.535797586338507 34.92410157287521 36.80498981101839 5 14.843326272841509 36.38894902830818 33.02747788667353 15.74024681217678 6 35.578892156260984 34.52628994548387 16.078744287523786 13.816073610731364 7 31.19312639917149 29.90973879156223 19.801108400497284 19.096026408768996 8 28.493436867373607 33.21105811402285 18.717371265063065 19.578133753540474 9 26.898465068421302 14.291469601569528 18.69873424502213 40.11133108498704 10 16.67388339698192 26.4689208161006 30.83600984748891 26.02118593942857 11 37.632830617387555 21.198996502489774 21.466499119484503 19.701673760638165 12 24.346309312037285 23.54190427937228 28.4231295462611 23.68865686232934 13 29.580633569402252 19.18374316177603 25.125381389317305 26.110241879504407 14 23.37283191193506 19.274584684610286 24.883434925552358 32.4691484779023 15 25.341436903085263 27.039414507413518 21.705544011267026 25.913604578234196 16 25.99176168480353 25.7686731982452 23.30644144289928 24.933123674051984 17 24.16317548037756 26.07107065774173 24.871605439777873 24.894148422102834 18 25.00407336066763 24.985771137393897 25.729466356272862 24.280689145665608 19 25.66819854787482 24.958875797095303 25.18162724620731 24.191298408822565 20 25.890086098664717 24.317320730080965 24.761373337871696 25.03121983338262 21 26.530746619110644 24.322873538333116 24.55232092278917 24.594058919767072 22 26.00199092477563 24.158153528869526 24.96579493028415 24.874060616070693 23 24.533599683058707 24.233175048685084 25.58419311099083 25.649032157265378 24 24.886475362726422 24.673208632001618 25.275622976560747 25.164693028711216 25 25.03336815227484 24.224720555674594 25.418831690593528 25.32307960145704 26 24.74106231132786 25.20174317711327 25.54256666648067 24.514627845078202 27 25.337031002388233 24.695221302144947 25.00267839207196 24.965069303394863 28 24.749066462512303 24.57876422626315 25.547790646545852 25.124378664678694 29 24.604269337904437 24.840859581458467 25.50498625098207 25.04988482965502 30 24.67705953710844 24.886866213647924 25.64328624215039 24.79278800709325 31 25.283824909632468 24.74435391261552 24.814215071931326 25.157606105820683 32 25.165585085903363 24.652787465195047 24.6860439811844 25.495583467717186 33 24.579327862010164 24.64662201221785 25.138103666470997 25.63594645930099 34 25.31253696763811 24.576978619592126 25.39523287659003 24.71525153617974 35 25.708597357783912 24.39117207884241 25.442657125702794 24.457573437670884 36 24.6642256180648 25.009067442802568 25.117430359249294 25.209276579883333 37 25.596479656804483 24.77520760583406 24.986914778098075 24.64139795926339 38 24.8886800749052 24.625083420194493 25.32090270136352 25.165333803536793 39 25.42128687236626 24.503495286050995 24.856929862152704 25.218287979430045 40 25.66546585958146 24.546014570387833 25.176996285979573 24.611523284051138 41 24.642711265169286 25.06590004620257 25.540983021112567 24.750405667515572 42 25.649699228820467 25.000725422139887 25.11154760443289 24.238027744606764 43 25.185484446984034 24.314756615835147 25.170976036570124 25.32878290061069 44 24.715828241399514 24.918835969978517 25.158673028096313 25.206662760525656 45 24.98404096227417 25.135261214851056 24.955247733370236 24.925450089504533 46 24.936051961965983 24.852573545823848 25.036828713003885 25.174545779206287 47 25.070224483988145 24.823587837800133 25.297889080469393 24.808298597742326 48 25.733210568901537 25.225747049468485 24.464495968304455 24.57654641332552 49 24.965012488365396 25.30261128483964 24.61725782726995 25.115118399525016 50 25.173538261001543 25.29897684966118 24.619108627139376 24.908376262197898 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 139.0 1 87.5 2 36.0 3 116.0 4 196.0 5 187.0 6 178.0 7 139.5 8 101.0 9 142.5 10 184.0 11 299.0 12 414.0 13 777.0 14 1140.0 15 1478.5 16 1817.0 17 1790.5 18 1764.0 19 1713.5 20 1663.0 21 2020.0 22 2377.0 23 2849.5 24 3322.0 25 4206.5 26 5091.0 27 6316.5 28 7542.0 29 8732.0 30 9922.0 31 11455.5 32 12989.0 33 15123.0 34 17257.0 35 20208.5 36 23160.0 37 27296.5 38 31433.0 39 34998.5 40 38564.0 41 42017.0 42 45470.0 43 47798.0 44 50126.0 45 54194.5 46 58263.0 47 61846.0 48 65429.0 49 68096.0 50 70763.0 51 69299.0 52 67835.0 53 67199.5 54 66564.0 55 66981.5 56 67399.0 57 65236.0 58 63073.0 59 57811.5 60 52550.0 61 45797.0 62 39044.0 63 33933.5 64 28823.0 65 24123.0 66 19423.0 67 16584.0 68 13745.0 69 12211.5 70 10678.0 71 8466.5 72 6255.0 73 5522.5 74 4790.0 75 3517.0 76 2244.0 77 1942.0 78 1640.0 79 1388.0 80 1136.0 81 917.5 82 699.0 83 555.0 84 411.0 85 332.5 86 254.0 87 171.0 88 88.0 89 55.5 90 23.0 91 21.5 92 20.0 93 15.0 94 10.0 95 9.5 96 9.0 97 8.0 98 7.0 99 6.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.031136099349824677 2 0.005021951508036238 3 3.347967672024159E-4 4 0.0 5 0.0 6 1.115989224008053E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0010043903016072476 17 0.0 18 0.0 19 0.0 20 1.115989224008053E-4 21 0.0 22 0.0 23 1.115989224008053E-4 24 5.579946120040265E-4 25 2.231978448016106E-4 26 1.115989224008053E-4 27 6.695935344048318E-4 28 0.0013391870688096636 29 2.231978448016106E-4 30 3.347967672024159E-4 31 3.347967672024159E-4 32 1.115989224008053E-4 33 0.0 34 0.0013391870688096636 35 0.0 36 3.347967672024159E-4 37 0.00189718168081369 38 0.0 39 2.231978448016106E-4 40 2.231978448016106E-4 41 0.0013391870688096636 42 0.0040175612064289904 43 0.00379436336162738 44 0.004575555818433017 45 0.0024551762928177166 46 0.0029015719824209375 47 0.0012275881464088583 48 0.004575555818433017 49 0.0035711655168257695 50 0.001115989224008053 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 896066.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.37531394010766 #Duplication Level Percentage of deduplicated Percentage of total 1 80.02867970109128 49.117853408667976 2 12.674742338595143 15.558325802825024 3 3.358718128777257 6.184271387701053 4 1.3382823459614188 3.2854999649554344 5 0.676600027254517 2.0763269542315683 6 0.408796587114124 1.5054011323064358 7 0.2787580398592513 1.1976203546783413 8 0.1981236436665033 0.972792066319173 9 0.14799405341576066 0.8174863340695236 >10 0.7648746753606551 8.58627450593574 >50 0.06898859140556426 2.9434444025363202 >100 0.05178233833644509 6.2304235417975615 >500 0.0034765527039456318 1.4066995567259999 >1k 1.8297645810240167E-4 0.11758058724989 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1047 0.11684407175364316 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.231978448016106E-4 2 0.0 0.0 0.0 0.0 2.231978448016106E-4 3 0.0 0.0 0.0 0.0 2.231978448016106E-4 4 0.0 0.0 0.0 0.0 2.231978448016106E-4 5 0.0 0.0 0.0 0.0 2.231978448016106E-4 6 0.0 0.0 0.0 0.0 2.231978448016106E-4 7 0.0 0.0 0.0 0.0 2.231978448016106E-4 8 0.0 0.0 0.0 0.0 2.231978448016106E-4 9 0.0 0.0 0.0 0.0 2.231978448016106E-4 10 0.0 0.0 0.0 0.0 2.231978448016106E-4 11 0.0 0.0 0.0 0.0 2.231978448016106E-4 12 0.0 0.0 0.0 0.0 2.231978448016106E-4 13 0.0 0.0 0.0 0.0 3.347967672024159E-4 14 0.0 0.0 0.0 0.0 3.347967672024159E-4 15 0.0 0.0 0.0 1.115989224008053E-4 4.463956896032212E-4 16 0.0 0.0 0.0 1.115989224008053E-4 4.463956896032212E-4 17 0.0 0.0 0.0 1.115989224008053E-4 4.463956896032212E-4 18 0.0 0.0 0.0 2.231978448016106E-4 4.463956896032212E-4 19 0.0 0.0 0.0 3.347967672024159E-4 4.463956896032212E-4 20 0.0 0.0 0.0 4.463956896032212E-4 4.463956896032212E-4 21 0.0 0.0 0.0 5.579946120040265E-4 4.463956896032212E-4 22 0.0 0.0 0.0 6.695935344048318E-4 4.463956896032212E-4 23 0.0 0.0 0.0 0.001115989224008053 4.463956896032212E-4 24 0.0 0.0 0.0 0.0013391870688096636 4.463956896032212E-4 25 0.0 0.0 0.0 0.001450785991210469 4.463956896032212E-4 26 0.0 0.0 0.0 0.001450785991210469 4.463956896032212E-4 27 0.0 0.0 0.0 0.0016739838360120794 4.463956896032212E-4 28 0.0 0.0 0.0 0.0039059622840281853 4.463956896032212E-4 29 0.0 0.0 0.0 0.006695935344048318 4.463956896032212E-4 30 0.0 0.0 0.0 0.010378699783274893 4.463956896032212E-4 31 0.0 0.0 0.0 0.017409431894525627 4.463956896032212E-4 32 0.0 0.0 0.0 0.026448944608990856 4.463956896032212E-4 33 0.0 0.0 0.0 0.034484067021848835 4.463956896032212E-4 34 0.0 0.0 0.0 0.04609035495153259 4.463956896032212E-4 35 0.0 0.0 0.0 0.05579946120040265 4.463956896032212E-4 36 0.0 0.0 0.0 0.06986092542290412 4.463956896032212E-4 37 0.0 0.0 0.0 0.08961393468784666 4.463956896032212E-4 38 0.0 0.0 0.0 0.11505848899523026 4.463956896032212E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATTG 25 0.0023526007 35.199596 14 TCGATCG 45 4.0687E-5 29.332998 41 GTATCAA 1185 0.0 25.072798 1 GTATACG 50 0.002574246 22.008345 1 GTCTTAG 115 8.725692E-9 21.05146 1 GGTATCA 545 0.0 20.998789 1 TATACCG 55 0.004483018 19.999771 5 GTACTAG 90 9.982108E-6 19.562973 1 CAAGACG 395 0.0 19.493448 4 CGTCGTA 215 0.0 19.441639 10 CGCAAGA 400 0.0 18.701874 2 AACCGCT 60 0.0074111307 18.333124 7 GCATTCG 240 0.0 18.333124 22 ATACCGT 230 0.0 18.173706 6 GGTATAT 85 1.4261603E-4 18.124521 1 AAGACGG 405 0.0 17.925722 5 CCGTCGT 210 0.0 17.80932 9 GAGCGAA 385 0.0 17.714083 16 ACCGTCG 225 0.0 17.5998 8 CGATCGT 75 0.0012906156 17.5998 42 >>END_MODULE