##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062285_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1046989 Sequences flagged as poor quality 0 Sequence length 50 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.218450241597573 32.0 32.0 32.0 32.0 32.0 2 31.62187186302817 32.0 32.0 32.0 32.0 32.0 3 31.672068187917926 32.0 32.0 32.0 32.0 32.0 4 31.73027796853644 32.0 32.0 32.0 32.0 32.0 5 31.73475270513826 32.0 32.0 32.0 32.0 32.0 6 35.42231102714546 36.0 36.0 36.0 36.0 36.0 7 35.42883163051379 36.0 36.0 36.0 36.0 36.0 8 35.39794305384297 36.0 36.0 36.0 36.0 36.0 9 35.43107234173425 36.0 36.0 36.0 36.0 36.0 10 35.3574536122156 36.0 36.0 36.0 36.0 36.0 11 35.415395959269866 36.0 36.0 36.0 36.0 36.0 12 35.36794846937265 36.0 36.0 36.0 36.0 36.0 13 35.36025306856137 36.0 36.0 36.0 36.0 36.0 14 35.340785815323756 36.0 36.0 36.0 36.0 36.0 15 35.30464789983467 36.0 36.0 36.0 36.0 36.0 16 35.303146451395385 36.0 36.0 36.0 36.0 36.0 17 35.32277034429206 36.0 36.0 36.0 36.0 36.0 18 35.286301957327154 36.0 36.0 36.0 36.0 36.0 19 35.22486482666007 36.0 36.0 36.0 36.0 36.0 20 35.18726653288621 36.0 36.0 36.0 36.0 36.0 21 35.0958453240674 36.0 36.0 36.0 36.0 36.0 22 34.97242186880664 36.0 36.0 36.0 36.0 36.0 23 34.94346454451766 36.0 36.0 36.0 36.0 36.0 24 34.91532193747976 36.0 36.0 36.0 36.0 36.0 25 34.82215476953435 36.0 36.0 36.0 32.0 36.0 26 34.77580089189094 36.0 36.0 36.0 32.0 36.0 27 34.613440064795334 36.0 36.0 36.0 32.0 36.0 28 34.46281097509143 36.0 36.0 36.0 32.0 36.0 29 34.37533727670491 36.0 36.0 36.0 32.0 36.0 30 34.26511835367898 36.0 36.0 36.0 32.0 36.0 31 34.186803299748135 36.0 36.0 36.0 32.0 36.0 32 34.123375699267136 36.0 36.0 36.0 32.0 36.0 33 34.20968988212866 36.0 36.0 36.0 32.0 36.0 34 34.13395938257231 36.0 36.0 36.0 32.0 36.0 35 34.02526578598247 36.0 36.0 36.0 32.0 36.0 36 33.834345919584635 36.0 36.0 36.0 32.0 36.0 37 33.53141819064002 36.0 36.0 36.0 21.0 36.0 38 33.41822120385219 36.0 36.0 36.0 21.0 36.0 39 32.74717212883803 36.0 36.0 36.0 14.0 36.0 40 32.83026373725034 36.0 36.0 36.0 14.0 36.0 41 32.87392035637433 36.0 36.0 36.0 14.0 36.0 42 32.68625362826162 36.0 36.0 36.0 14.0 36.0 43 32.72080317940303 36.0 36.0 36.0 14.0 36.0 44 32.5857301270596 36.0 36.0 36.0 14.0 36.0 45 32.25723956985222 36.0 36.0 36.0 14.0 36.0 46 32.12422957643299 36.0 36.0 36.0 14.0 36.0 47 32.09589212494114 36.0 36.0 36.0 14.0 36.0 48 32.11867268901584 36.0 36.0 36.0 14.0 36.0 49 32.1340940544743 36.0 36.0 36.0 14.0 36.0 50 31.744482511277578 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 8.0 21 37.0 22 108.0 23 394.0 24 1138.0 25 2804.0 26 5830.0 27 10973.0 28 18889.0 29 29468.0 30 43166.0 31 61138.0 32 86461.0 33 114696.0 34 189975.0 35 481900.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.289802204773764 20.2547585698207 13.530275033010458 26.92516419239508 2 9.008120948838595 20.672504732921844 49.11655309564609 21.202821222593467 3 19.79122890130126 27.302709496993266 29.342282212526648 23.563779389178823 4 10.710332200242792 19.115291564667825 38.52275429827821 31.651621936811182 5 8.639823341028416 41.49613797279628 37.3801443950223 12.48389429115301 6 30.319059012306766 36.31733023873313 19.96905399790828 13.39455675105183 7 25.742581822731665 31.12898034267791 24.05717729603654 19.07126053855389 8 22.257635944599226 45.92550638067831 20.004317141822884 11.812540532899583 9 26.45481471152037 16.099023007882604 20.968892700878424 36.4772695797186 10 17.154525978782967 28.517969147717885 35.79321272716332 18.534292146335826 11 31.248561350692317 18.71853476970627 31.05534060052207 18.97756327907934 12 28.670119743378393 22.18466478635401 34.19672986058116 14.948485609686443 13 33.80436661703227 23.706648302895257 24.714681816141333 17.77430326393114 14 18.625410582155112 27.97956807569134 24.982974988275902 28.412046353877646 15 20.1352640763179 42.583350923457644 22.352670371895027 14.928714628329429 16 16.71615817287993 25.796552181940264 40.521843280823624 16.965446364356183 17 18.46027035623106 33.12460780390243 33.64170970277625 14.773412137090267 18 20.105311718292587 22.50744278582256 43.84381085916062 13.543434636724239 19 25.180493777871593 27.19168969301492 26.88519172598757 20.742624803125917 20 24.434400809179103 27.740459050589934 33.5991755389513 14.225964601279673 21 17.759993428769004 28.04645325447856 25.688928621913526 28.50462469483891 22 22.429653033603984 36.924265679964165 24.70264730575011 15.943433980681746 23 14.077607310105456 36.48672526645457 30.78179426908974 18.653873154350237 24 24.03304758948399 29.41856300293703 31.471811647842596 15.076577759736384 25 20.745263069420222 30.503941791007712 30.39391166644062 18.356883473131447 26 13.526732926705801 32.97923754472362 33.7991147923659 19.694914736204687 27 18.50561373849673 34.20325983657836 29.877982970147617 17.413143454777288 28 16.013153986263386 32.454395152547846 27.541803448575575 23.990647412613196 29 20.037326191563213 29.4067924499468 27.87085978227025 22.68502157621974 30 17.845360647501668 28.57337976538189 32.686455684837696 20.89480390227875 31 23.497926428815667 25.433004834830648 29.792375447236164 21.276693289117524 32 16.83722005302851 33.040428507025894 31.11938673370367 19.00296470624193 33 13.97684216357574 34.50943610677858 35.39607388425284 16.117647845392835 34 16.119539553613045 33.29277238238598 35.232248057276905 15.355440006724075 35 16.41671155734354 34.943475951968885 32.81737708550623 15.82243540518134 36 15.44535371943136 31.75566482137331 35.721135294769375 17.077846164425953 37 17.30393421014929 32.10856089477254 27.79372856910895 22.793776325969226 38 19.3737470021175 37.01653025963024 25.66397545723976 17.9457472810125 39 22.98929399999809 28.48976535435628 29.25806818257794 19.26287246306769 40 25.545827129033828 28.166007474768122 30.52152410388266 15.766641292315391 41 23.08271998074458 25.73473368112797 33.41636595993421 17.766180378193237 42 21.494961998886282 34.44103451668333 31.331505153575694 12.732498330854689 43 16.66661890830107 33.98389778945629 31.60734600076222 17.742137301480415 44 15.532928984192177 33.669134151583165 32.67940207268733 18.11853479153732 45 18.23548851727471 34.03116057476666 29.62604253823436 18.10730836972427 46 17.666599807062283 27.614831370526378 34.296875746200946 20.4216930762104 47 26.399222903338575 26.86026587097674 30.693503372576586 16.0470078531081 48 15.90666176351193 34.535720596592945 28.427472312299116 21.130145327596004 49 21.198951619373645 28.073314051891785 32.163966118661094 18.56376821007347 50 15.784964435500124 39.4089234563326 25.75811555429902 19.047996553868256 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 240.0 1 172.0 2 104.0 3 317.5 4 531.0 5 485.0 6 439.0 7 413.5 8 388.0 9 477.0 10 566.0 11 734.5 12 903.0 13 1366.5 14 1830.0 15 2218.5 16 2607.0 17 2774.5 18 2942.0 19 2858.5 20 2775.0 21 3033.5 22 3292.0 23 3749.5 24 4207.0 25 5880.0 26 7553.0 27 13545.0 28 19537.0 29 29855.5 30 40174.0 31 55867.5 32 71561.0 33 97565.0 34 123569.0 35 146808.0 36 170047.0 37 159826.0 38 149605.0 39 124918.5 40 100232.0 41 79346.5 42 58461.0 43 49279.0 44 40097.0 45 47929.0 46 55761.0 47 64751.5 48 73742.0 49 64244.5 50 54747.0 51 39872.5 52 24998.0 53 17672.0 54 10346.0 55 8699.5 56 7053.0 57 6421.5 58 5790.0 59 5026.5 60 4263.0 61 3604.5 62 2946.0 63 2420.0 64 1894.0 65 1704.5 66 1515.0 67 1169.5 68 824.0 69 680.0 70 536.0 71 432.5 72 329.0 73 285.5 74 242.0 75 201.5 76 161.0 77 117.5 78 74.0 79 64.0 80 54.0 81 41.0 82 28.0 83 19.0 84 10.0 85 7.5 86 5.0 87 3.0 88 1.0 89 4.0 90 7.0 91 4.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0335247075184171 2 0.006399303144541155 3 4.775599361597878E-4 4 0.0 5 0.0 6 3.820479489278302E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.640958978556604E-4 17 0.0 18 1.910239744639151E-4 19 0.0 20 1.910239744639151E-4 21 9.551198723195755E-5 22 0.0 23 0.0 24 0.0013371678212474056 25 2.865359616958726E-4 26 2.865359616958726E-4 27 3.820479489278302E-4 28 5.730719233917452E-4 29 2.865359616958726E-4 30 0.001050631859551533 31 2.865359616958726E-4 32 4.775599361597878E-4 33 0.0 34 4.775599361597878E-4 35 9.551198723195755E-5 36 9.551198723195755E-5 37 0.0018147277574071933 38 0.0 39 5.730719233917452E-4 40 0.0 41 0.001050631859551533 42 0.004393551412670047 43 0.004966623336061793 44 0.003724967502046344 45 0.002387799680798939 46 0.0018147277574071933 47 0.0014326798084793632 48 0.004202527438206132 49 0.00391599147651026 50 0.0017192157701752357 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1046989.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.576384654478396 #Duplication Level Percentage of deduplicated Percentage of total 1 76.45914423300239 32.55353935216554 2 12.530657513575058 10.670201885430028 3 4.232631945211163 5.406304974004308 4 1.9948429578240527 3.3973280439037716 5 1.12747935974588 2.400199745526281 6 0.7134499497523552 1.8225671695424734 7 0.4781389200904657 1.4250198606034001 8 0.3526559350820991 1.201185179419217 9 0.25586577212484685 0.9804455580512337 >10 1.5874456745453305 12.664299036632116 >50 0.14409006918716208 4.296633699766135 >100 0.10199591497491205 8.473034229345574 >500 0.010021432678324517 2.8666015044070963 >1k 0.010244131182287284 7.969082017692694 >5k 0.0011134925198138352 2.9160011466455806 >10k+ 2.2269850396276704E-4 0.9575565968645937 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 10099 0.9645755590555394 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 7729 0.7382121493157999 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 7299 0.6971419948060581 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 5363 0.5122307875249883 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 5184 0.4951341418104679 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 5179 0.4946565818743081 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 4755 0.4541594992879581 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 4430 0.4231181034375719 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 3807 0.3636141353920624 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 3599 0.3437476420478152 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 3322 0.317290821584563 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 3197 0.30535182318056825 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 2662 0.254252910011471 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 2653 0.25339330212638334 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 2499 0.2386844560926619 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 2406 0.22980184128008987 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATA 2286 0.21834040281225492 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 2285 0.218244890825023 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 2258 0.21566606716976017 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 1986 0.18968680664266768 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 1876 0.17918048804715236 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 1747 0.16685944169422984 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1723 0.16456715400066285 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 1676 0.16007809060076086 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC 1596 0.15243713162220426 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG 1571 0.1500493319414053 No Hit GCCATATTCCACGTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 1537 0.14680192437551876 No Hit GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACACACTT 1485 0.14183530103945696 No Hit GTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAA 1472 0.14059364520544151 No Hit ATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGAT 1472 0.14059364520544151 No Hit CCATATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAG 1444 0.13791930956294668 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 1324 0.1264578710951118 No Hit CCATATTTCACGTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAG 1297 0.12387904743984895 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 1295 0.12368802346538503 No Hit ACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATAT 1267 0.12101368782289021 No Hit ACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGC 1262 0.12053612788673043 No Hit GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTG 1255 0.11986754397610672 No Hit TTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATT 1217 0.11623808846129233 No Hit CCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATG 1193 0.11394580076772534 No Hit ATTCCACGTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTT 1180 0.11270414493370991 No Hit CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 1175 0.11222658499755012 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 1141 0.10897917743166356 No Hit GAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTAGAAATGTCCAC 1139 0.10878815345719964 No Hit CAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTA 1111 0.10611381781470484 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC 1081 0.1032484581977461 No Hit ACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACAC 1079 0.1030574342232822 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT 1072 0.10238885031265849 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1071 0.10229333832542653 No Hit GGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 1064 0.10162475441480284 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 9.551198723195755E-5 0.0 21 0.0 0.0 0.0 9.551198723195755E-5 0.0 22 0.0 0.0 0.0 1.910239744639151E-4 0.0 23 0.0 0.0 0.0 4.775599361597877E-4 0.0 24 0.0 0.0 0.0 0.001050631859551533 0.0 25 0.0 0.0 0.0 0.0015281917957113208 0.0 26 0.0 0.0 0.0 0.0020057517318711085 0.0 27 0.0 0.0 0.0 0.0030563835914226415 0.0 28 0.0 0.0 0.0 0.004202527438206132 0.0 29 0.0 0.0 0.0 0.005921743208381368 0.0 30 0.0 0.0 0.0 0.007449935004092688 0.0 31 0.0 0.0 0.0 0.011747974429530779 0.0 32 0.0 0.0 0.0 0.01757420565068019 0.0 33 0.0 0.0 0.0 0.022827364948437855 0.0 34 0.0 0.0 0.0 0.029417692067442925 0.0 35 0.0 0.0 0.0 0.036294555148143864 0.0 36 0.0 0.0 0.0 0.045750241884107666 0.0 37 0.0 0.0 0.0 0.06303791157309198 0.0 38 0.0 0.0 0.0 0.08519669261090614 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGTTG 25 0.0023528251 35.199463 35 CGGTTAT 35 3.2169558E-4 31.429596 43 CCATTCG 35 3.2178572E-4 31.428095 9 ACTATCC 50 2.3613338E-6 30.79953 20 ACCTACT 45 4.069451E-5 29.33289 8 CCGGTCC 30 0.0057450924 29.332888 4 GGACCCG 30 0.0057450924 29.332888 6 TAGGACC 2275 0.0 29.20395 4 TCGTATA 55 4.95896E-6 28.000912 44 GTCTAGT 40 7.0164335E-4 27.510094 1 CGACGTG 40 7.032124E-4 27.499582 6 GAGACCC 40 7.032124E-4 27.499582 29 GAACGTA 40 7.032124E-4 27.499582 6 CTCGATG 40 7.032124E-4 27.499582 10 TACGGTG 50 8.341245E-5 26.399597 5 CACCTAC 50 8.341245E-5 26.399597 7 GACCTTG 85 8.234565E-9 25.88196 7 TGGTATA 755 0.0 25.643219 44 TATAGGA 355 0.0 25.411705 2 GTATAGG 70 1.1284137E-6 25.152086 1 >>END_MODULE