##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062284_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 56948 Sequences flagged as poor quality 0 Sequence length 25 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.8239446512608 32.0 32.0 32.0 14.0 32.0 2 30.207434852848213 32.0 32.0 32.0 21.0 32.0 3 30.304558544637214 32.0 32.0 32.0 21.0 32.0 4 29.96505584041582 32.0 32.0 32.0 21.0 32.0 5 30.39592259605254 32.0 32.0 32.0 32.0 32.0 6 33.637546533679846 36.0 36.0 36.0 27.0 36.0 7 33.24329212615017 36.0 36.0 36.0 21.0 36.0 8 32.903613823136894 36.0 36.0 36.0 14.0 36.0 9 32.64881997611857 36.0 36.0 36.0 14.0 36.0 10 33.07106483107396 36.0 36.0 36.0 14.0 36.0 11 33.325489920629344 36.0 36.0 36.0 21.0 36.0 12 33.21930533117932 36.0 36.0 36.0 21.0 36.0 13 33.141866263960104 36.0 36.0 36.0 21.0 36.0 14 32.9618599424036 36.0 36.0 36.0 14.0 36.0 15 33.12321767226241 36.0 36.0 36.0 21.0 36.0 16 33.22308070520475 36.0 36.0 36.0 21.0 36.0 17 33.01360890637073 36.0 36.0 36.0 14.0 36.0 18 32.99227365315727 36.0 36.0 36.0 14.0 36.0 19 32.96535435836201 36.0 36.0 36.0 14.0 36.0 20 32.62448198356395 36.0 36.0 36.0 14.0 36.0 21 32.401875395097285 36.0 36.0 36.0 14.0 36.0 22 32.45497646976189 36.0 36.0 36.0 14.0 36.0 23 32.57619231579687 36.0 36.0 36.0 14.0 36.0 24 32.58214511484161 36.0 36.0 36.0 14.0 36.0 25 32.01113296340521 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 4.0 6 13.0 7 3.0 8 9.0 9 6.0 10 1.0 11 2.0 12 1.0 13 4.0 14 132.0 15 159.0 16 188.0 17 247.0 18 329.0 19 340.0 20 453.0 21 549.0 22 637.0 23 775.0 24 918.0 25 925.0 26 1077.0 27 1250.0 28 1440.0 29 1748.0 30 2186.0 31 2836.0 32 3688.0 33 5036.0 34 10106.0 35 21886.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 52.107185502563745 17.563391163868793 12.75900821802346 17.570415115544005 2 12.144412446442368 24.92624850741027 40.001404790335044 22.92793425581232 3 19.74608414694107 35.94331670998104 26.578633139004005 17.731966004073893 4 10.585652822899288 18.23689524980244 33.082799192203005 38.094652735095266 5 10.05269629369401 43.089759353592136 29.413314596873352 17.444229755840507 6 27.35275513072814 34.52171773966826 20.9024458813607 17.223081248242902 7 24.935836585451604 36.06687058327181 21.45167528038533 17.545617550891258 8 31.700242590444045 28.124670393418416 20.94012586576662 19.234961150370918 9 31.475035161744024 14.940225035161744 20.30239099859353 33.28234880450071 10 17.150242667229374 31.571358233101215 28.100161778152916 23.178237321516495 11 29.89342618972249 27.37680700643664 20.247265308993704 22.482501494847174 12 26.050257618654054 30.23018622399634 28.387289640740676 15.33226651660893 13 30.87568137858273 23.13873747142606 26.653771760154736 19.33180938983647 14 25.996835443037973 22.89029535864979 29.437412095639942 21.675457102672294 15 25.691477202792285 24.859770357475693 32.34864869617204 17.100103743559984 16 18.540461665582534 29.786747771663645 31.22132170672105 20.45146885603277 17 18.68560779211646 28.279826998136365 31.551742325679527 21.482822884067655 18 20.749309938641677 24.525747639726436 36.17679635717928 18.54814606445261 19 20.001757623692768 29.30661745320327 35.91528253800861 14.77634238509535 20 22.70402334206317 23.222540558592446 37.06607139718419 17.007364702160196 21 23.678799275909945 25.077769380832706 32.011107400833055 19.232323942424294 22 22.050551922941715 26.995008085495325 31.38754130633481 19.56689868522815 23 17.441043123747935 29.148068744947807 32.74698625803957 20.66390187326468 24 17.779808773903262 32.44340551181102 32.874015748031496 16.90276996625422 25 20.45690185396714 27.092522625428344 31.837272647394784 20.613302873209737 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 262.0 1 262.0 2 343.5 3 425.0 4 425.0 5 425.0 6 951.5 7 1478.0 8 1478.0 9 1478.0 10 1333.5 11 1189.0 12 1189.0 13 1189.0 14 851.0 15 513.0 16 513.0 17 513.0 18 717.5 19 922.0 20 922.0 21 922.0 22 1307.0 23 1692.0 24 1692.0 25 1692.0 26 2393.0 27 3094.0 28 3094.0 29 3094.0 30 3456.5 31 3819.0 32 3819.0 33 3819.0 34 3539.0 35 3259.0 36 3259.0 37 3259.0 38 3403.5 39 3548.0 40 3548.0 41 3548.0 42 4536.5 43 5525.0 44 5525.0 45 5525.0 46 9323.5 47 13122.0 48 13122.0 49 13122.0 50 10806.0 51 8490.0 52 8490.0 53 8490.0 54 5992.5 55 3495.0 56 3495.0 57 3495.0 58 2859.0 59 2223.0 60 2223.0 61 2223.0 62 1935.5 63 1648.0 64 1648.0 65 1648.0 66 1349.0 67 1050.0 68 1050.0 69 1050.0 70 812.0 71 574.0 72 574.0 73 574.0 74 440.0 75 306.0 76 306.0 77 306.0 78 237.0 79 168.0 80 168.0 81 168.0 82 120.0 83 72.0 84 72.0 85 72.0 86 51.0 87 30.0 88 30.0 89 30.0 90 28.5 91 27.0 92 27.0 93 27.0 94 14.0 95 1.0 96 1.0 97 1.0 98 8.5 99 16.0 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.005267963756409356 5 0.031607782538456135 6 0.06321556507691227 7 0.10887125096579336 8 0.10887125096579336 9 0.11940717847861207 10 0.1404790335042495 11 0.1510149610170682 12 0.1422350214230526 13 0.13696705766664327 14 0.11940717847861207 15 0.13521106974784014 16 0.11765119055980894 17 0.12291915431621832 18 0.12116316639741519 19 0.09306735969656528 20 0.09657933553417151 21 0.08604340802135282 22 0.09833532345297465 23 0.07375149258973099 24 0.09131137177776216 25 0.0755074805085341 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 56948.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.113998735688696 #Duplication Level Percentage of deduplicated Percentage of total 1 85.81927573207417 39.57469972606589 2 8.091847225924374 7.462948654913254 3 2.0981683865808614 2.902648029781555 4 1.0205247324930504 1.882419048956943 5 0.6130764251170938 1.4135702746365104 6 0.33509767335592705 0.9271616211280467 7 0.23989947069799322 0.7743906721921754 8 0.2360915425916759 0.8709700077263469 9 0.16374090857164617 0.6795673245768069 >10 1.0852595103004454 9.952939523776076 >50 0.12566162750847265 4.228418908477909 >100 0.12946955561478998 12.664184870408091 >500 0.030463424850538823 10.147854182763224 >1k 0.011423784318952057 6.518227154597176 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 1502 2.637493854042284 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1118 1.9631944932218865 No Hit TATCAACGCAGAGTACTTTTTTTTT 1092 1.9175388073330055 No Hit GTACATGGGAAGCAGTGGTATCAAC 913 1.6032169698672474 No Hit GTACATGGAAGCAGTGGTATCAACG 801 1.406546322961298 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 756 1.3275268666151576 No Hit GTATCAACGCAGAGTACATGGGAAG 726 1.2748472290510642 No Hit CCCATGTACTCTGCGTTGATACCAC 679 1.1923157968673175 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 660 1.1589520264100583 No Hit GGTATCAACGCAGAGTACTTTTTTT 631 1.1080283767647678 No Hit TCCATGTACTCTGCGTTGATACCAC 613 1.0764205942263116 No Hit TATCAACGCAGAGTACATGGGAAGC 448 0.7866825876237972 No Hit GTACATGGGAGTGGTATCAACGCAA 434 0.7620987567605535 No Hit GGTATCAACGCAGAGTACATGGGAA 386 0.6778113366580037 No Hit GAGTACATGGAAGCAGTGGTATCAA 376 0.6602514574699726 No Hit CATGTACTCTGCGTTGATACCACTG 360 0.6321556507691227 No Hit GCGTTGATACCACTGCTTCCCATGT 282 0.4951885931024794 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 271 0.4758727259956451 No Hit ACGCAGAGTACATGGGAAGCAGTGG 271 0.4758727259956451 No Hit GTACATGGGGTGGTATCAACGCAAA 267 0.4688487743204327 No Hit GAGTACATGGGAAGCAGTGGTATCA 252 0.4425089555383859 No Hit ACTCTGCGTTGATACCACTGCTTCC 240 0.4214371005127485 No Hit AAAAAGTACTCTGCGTTGATACCAC 239 0.4196811125939453 No Hit GTATCAACGCAGAGTACATGGGAGT 217 0.38104937838027675 No Hit GCTTCCATGTACTCTGCGTTGATAC 213 0.3740254267050643 No Hit CAGTGGTATCAACGCAGAGTACATG 209 0.3670014750298518 No Hit ATCAACGCAGAGTACTTTTTTTTTT 201 0.3529535716794268 No Hit CATGGAAGCAGTGGTATCAACGCAG 195 0.34241764416660814 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 182 0.31958980122216757 No Hit GTATCAACGCAGAGTACATGGGGTG 181 0.31783381330336447 No Hit GTACATGGGTGGTATCAACGCAAAA 175 0.3072978857905458 No Hit GCGTTGATACCACTGCTTCCATGTA 170 0.29851794619653016 No Hit GTATCAACGCAGAGTACATGGAAGC 168 0.29500597035892395 No Hit GCTTCCCATGTACTCTGCGTTGATA 151 0.2651541757392709 No Hit AAAGTACTCTGCGTTGATACCACTG 140 0.24583830863243664 No Hit GGTATCAACGCAGAGTACATGGGAG 135 0.237058369038421 No Hit GTGGTATCAACGCAGAGTACATGGG 132 0.23179040528201167 No Hit GTATCAACGCAGAGTACATGGGACG 128 0.2247664536067992 No Hit TATCAACGCAGAGTACATGGGGTGG 127 0.22301046568799607 No Hit GTACATGGGACGCAGAGTACTTTTT 123 0.2159865140127836 No Hit TATCAACGCAGAGTACATGGGAGTG 118 0.207206574418768 No Hit GTACTCTGCGTTGATACCACTGCTT 110 0.19315867106834303 No Hit GTACATGGGAGAGTACTTTTTTTTT 105 0.18437873147432746 No Hit ATCAACGCAGAGTACATGGGAAGCA 104 0.18262274355552433 No Hit GGTATCAACGCAGAGTACATGGGGT 102 0.1791107677179181 No Hit ACTTTTTTTTTTTTTTTTTTTTTTT 96 0.16857484020509939 No Hit CTTTTTTTTTTTTTTTTTTTTTTTT 96 0.16857484020509939 No Hit GGTATCAACGCAGAGTACATGGGAC 95 0.16681885228629628 No Hit ACGCAGAGTACATGGAAGCAGTGGT 94 0.16506286436749315 No Hit AAGCAGTGGTATCAACGCAGAGTAC 93 0.16330687644869002 No Hit TATCAACGCAGAGTACATGGAAGCA 92 0.16155088852988692 No Hit GAGTGGTATCAACGCAAAAAAAAAA 89 0.15628292477347755 No Hit ATACCACTGCTTCCCATGTACTCTG 85 0.14925897309826508 No Hit GCAGTGGTATCAACGCAGAGTACAT 83 0.14574699726065884 No Hit ACGCAGAGTACATGGGAGTGGTATC 82 0.14399100934185574 No Hit CAACGCAGAGTACTTTTTTTTTTTT 82 0.14399100934185574 No Hit GTATCAACGCAGAGTACATGGGCAG 76 0.13345508182903704 No Hit ACGCAGAGTACATGGGGTGGTATCA 75 0.1316990939102339 No Hit GGTATCAACGCAGAGTACATGGAAG 75 0.1316990939102339 No Hit GAGTACATGGGGTGGTATCAACGCA 75 0.1316990939102339 No Hit TATCAACGCAGAGTACATGGGACGC 74 0.12994310599143077 No Hit AACGCAGAGTACTTTTTTTTTTTTT 71 0.12467514223502142 No Hit GTGGTATCAACGCAGAGTACATGGA 69 0.12116316639741519 No Hit GTATCAACGCAGAGTACATGGGTGG 67 0.11765119055980894 No Hit CCCCATGTACTCTGCGTTGATACCA 66 0.11589520264100583 No Hit GGGAAGCAGTGGTATCAACGCAGAG 66 0.11589520264100583 No Hit TCAACGCAGAGTACTTTTTTTTTTT 64 0.1123832268033996 No Hit ACGCAGAGTACATGGGACGCAGAGT 64 0.1123832268033996 No Hit TATCAACGCAGAGTACATGGGTGGT 64 0.1123832268033996 No Hit GTACATGGGCAGTGGTATCAACGCA 62 0.10887125096579336 No Hit CTGCTTCCCATGTACTCTGCGTTGA 60 0.10535927512818713 No Hit GTATCAACGCAGAGTACATGGGAGA 59 0.103603287209384 No Hit GAAGCAGTGGTATCAACGCAGAGTA 59 0.103603287209384 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAGTGGT 100 9.316864E-9 13.300615 9 GACGCAG 70 1.0552585E-4 12.214851 9 GGGAGTG 110 3.531568E-8 12.091468 7 GGAGTGG 110 3.531568E-8 12.091468 8 GGGACGC 75 2.0068113E-4 11.400527 7 GGACGCA 75 2.0068113E-4 11.400527 8 TCCATGT 115 8.2580664E-7 10.739627 1 ACATGGA 235 0.0 10.511126 3 ATGGAAG 220 1.8189894E-12 9.932278 5 CATGGAA 250 0.0 9.880458 4 TGGGACG 90 0.0010787343 9.50044 6 TGCGTTG 375 0.0 9.373767 12 CTGCGTT 375 0.0 9.373767 11 TGGAAGC 235 5.456968E-12 9.298303 6 CTCTGCG 385 0.0 9.130293 9 TCTGCGT 390 0.0 9.013237 10 TGTACTC 355 0.0 8.831394 5 ATGTACT 370 0.0 8.730134 4 ACTCTGC 415 0.0 8.470271 8 CCATGTA 375 0.0 8.360387 2 >>END_MODULE