SRR4062283_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062283_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	347678
Sequences flagged as poor quality	0
Sequence length	25
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	2002	0.5758201554311748	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1440	0.414176335574871	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1036	0.2979768636496989	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	555	0.15963046266948153	No Hit
CTCCTGGTGGTGCCCTTCCGTCAAT	517	0.1487008093695891	No Hit
ACCATACTCCCCCCGGAACCCAAAG	476	0.1369082887039157	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTG	393	0.11303562491730855	No Hit
TCGTAGTTCCGACCATAAACGATGC	362	0.10411932880423841	No Hit
GAATAGGACCGCGGTTCTATTTTGT	360	0.10354408389371775	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	355	0.10210597161741611	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAGTGT	25	0.0060217967	19.000576	6
GGTATCA	270	0.0	16.879675	1
GCACGCC	35	0.0021651976	16.28621	15
GGCCGCG	40	0.0052620885	14.252484	7
AAATCGC	40	0.005267122	14.250432	14
ATATCTG	40	0.005267122	14.250432	5
TCAATAC	40	0.0052721594	14.248379	3
CGACCAT	65	5.4198506E-5	13.15614	10
CGACTGG	65	5.4271855E-5	13.154244	15
CTGGCGA	65	5.4271855E-5	13.154244	18
CGCATCG	60	4.0767717E-4	12.667051	13
CGACCCG	75	1.4703086E-5	12.66705	5
GACCCGG	75	1.4703086E-5	12.66705	6
CTTTCGA	100	1.4266516E-7	12.352154	11
CGATGCC	85	3.910818E-6	12.296263	9
CTCCCGA	85	3.942452E-6	12.287411	1
GACCATA	70	1.0844334E-4	12.216415	11
GCGCGCG	55	0.0030562042	12.093017	11
CAGGACT	120	9.915311E-9	11.873651	4
TCGCCAG	65	7.9938764E-4	11.692662	17