##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062283_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 347678 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.076087644314565 32.0 32.0 32.0 21.0 32.0 2 28.60841065583672 32.0 32.0 32.0 14.0 32.0 3 30.233739264491856 32.0 32.0 32.0 21.0 32.0 4 30.95658914282756 32.0 32.0 32.0 32.0 32.0 5 30.738536807045598 32.0 32.0 32.0 32.0 32.0 6 34.0651321049937 36.0 36.0 36.0 32.0 36.0 7 34.25194864213439 36.0 36.0 36.0 32.0 36.0 8 33.93046151899171 36.0 36.0 36.0 32.0 36.0 9 34.46220065692969 36.0 36.0 36.0 32.0 36.0 10 33.86242730342443 36.0 36.0 36.0 32.0 36.0 11 34.571025489101984 36.0 36.0 36.0 32.0 36.0 12 34.16388727500733 36.0 36.0 36.0 32.0 36.0 13 34.40291016400232 36.0 36.0 36.0 32.0 36.0 14 34.28731757545775 36.0 36.0 36.0 32.0 36.0 15 34.147228182398656 36.0 36.0 36.0 32.0 36.0 16 34.19634259285891 36.0 36.0 36.0 32.0 36.0 17 34.18497287720247 36.0 36.0 36.0 32.0 36.0 18 34.163622662348494 36.0 36.0 36.0 32.0 36.0 19 34.1617473639402 36.0 36.0 36.0 32.0 36.0 20 34.2247798250105 36.0 36.0 36.0 32.0 36.0 21 34.256032880999086 36.0 36.0 36.0 32.0 36.0 22 34.21792290567709 36.0 36.0 36.0 32.0 36.0 23 34.05606912142845 36.0 36.0 36.0 32.0 36.0 24 34.1184429270762 36.0 36.0 36.0 32.0 36.0 25 34.04743181909698 36.0 36.0 36.0 32.0 36.0 26 33.928059871490284 36.0 36.0 36.0 32.0 36.0 27 33.93392449335305 36.0 36.0 36.0 32.0 36.0 28 33.890568284447106 36.0 36.0 36.0 32.0 36.0 29 33.79311892038035 36.0 36.0 36.0 32.0 36.0 30 33.771334395618936 36.0 36.0 36.0 32.0 36.0 31 33.840398299576044 36.0 36.0 36.0 32.0 36.0 32 33.74680307640978 36.0 36.0 36.0 32.0 36.0 33 33.66436185205851 36.0 36.0 36.0 27.0 36.0 34 33.63060648070916 36.0 36.0 36.0 27.0 36.0 35 33.61296659552804 36.0 36.0 36.0 27.0 36.0 36 33.5342443295233 36.0 36.0 36.0 27.0 36.0 37 33.555617554173686 36.0 36.0 36.0 27.0 36.0 38 33.52989547799976 36.0 36.0 36.0 27.0 36.0 39 33.530424703317436 36.0 36.0 36.0 27.0 36.0 40 33.510446447575056 36.0 36.0 36.0 27.0 36.0 41 33.46091210833012 36.0 36.0 36.0 21.0 36.0 42 33.36291913782293 36.0 36.0 36.0 21.0 36.0 43 33.36896208560795 36.0 36.0 36.0 21.0 36.0 44 33.243230805515445 36.0 36.0 36.0 21.0 36.0 45 33.187682280731025 36.0 36.0 36.0 21.0 36.0 46 33.13411547466334 36.0 36.0 36.0 21.0 36.0 47 33.13550469112224 36.0 36.0 36.0 21.0 36.0 48 33.03390493502609 36.0 36.0 36.0 14.0 36.0 49 33.016702235976965 36.0 36.0 36.0 14.0 36.0 50 32.318070168374184 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 3.0 21 10.0 22 66.0 23 184.0 24 416.0 25 894.0 26 1807.0 27 3399.0 28 6055.0 29 10301.0 30 16874.0 31 27042.0 32 42936.0 33 68608.0 34 98415.0 35 70666.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.26366659379351 20.834148362079876 13.715495518300752 25.186689525825862 2 18.817844507722842 20.66097161101044 34.95872522794604 25.56245865332068 3 21.675290571421176 22.899990508431674 28.306445350138205 27.118273570008945 4 15.235649077594788 17.388503155218334 35.313709811952435 32.06213795523444 5 19.382877259993442 33.35385040180857 30.449151226134525 16.81412111206346 6 34.97546580456629 36.14206248310218 14.941411305863472 13.941060406468054 7 29.769211741899117 30.463532348897544 19.445578955240194 20.32167695396315 8 28.495331887551124 32.456755963851606 17.72962338715708 21.318288761440183 9 26.11698180500348 13.982478040025542 17.933547707936654 41.96699244703432 10 16.749406059629887 25.860710197366526 29.454552775844316 27.935330967159267 11 37.737504242431214 20.71543209521454 21.00938224449059 20.537681417863656 12 24.330558735381587 23.325605876702006 27.247625676631827 25.09620971128458 13 29.189652494549556 18.76678996082582 24.646080568802166 27.397476975822453 14 23.868924694688765 18.74924499105494 24.20774394698543 33.17408636727087 15 25.72207617393105 26.068085987609223 21.4733172648255 26.736520573634227 16 25.92837605018451 25.798657949763715 22.725690799218814 25.54727520083296 17 24.118580985854727 26.270572196112496 24.072273770557814 25.538573047474962 18 25.2011919074546 24.792480398529673 25.11605566069754 24.890272033318187 19 25.50262024056742 25.23484373472006 24.924499105494164 24.338036919218357 20 26.223689735905058 23.827219438676018 24.23305472304834 25.71603610237058 21 26.796921289238895 24.167476803248984 24.151657568209664 24.88394433930246 22 25.747962194904478 24.24427199880349 24.61472972117879 25.393036085113234 23 24.62227872421817 24.080396459932636 25.336734958021385 25.96058985782781 24 24.524627885237653 24.8441791903358 24.899115553318474 25.732077371108076 25 24.906954135723282 24.11397902657056 25.217011142493917 25.76205569521224 26 24.854894471321167 24.72690247873032 24.952398483654417 25.465804566294096 27 25.32379191030756 24.44021318637701 24.973466752186656 25.262528151128777 28 24.6360095951955 24.46142075622566 25.566191317153425 25.336378331425415 29 24.888401845396288 24.89012759005511 25.072768899780257 25.148701664768346 30 25.04278445550848 24.587183934329097 25.397715669609088 24.972315940553337 31 25.499027830508865 24.538938551985183 24.752930889678897 25.20910272782706 32 25.585241474126846 24.696485531110774 24.21701751913414 25.50125547562824 33 24.570435863068703 24.68433435535179 25.183359315228458 25.56187046635105 34 25.321636585891998 24.596534119508163 25.195369238512978 24.88646005608686 35 26.153509856821543 24.407929175846615 24.794206133261238 24.644354834070604 36 24.323943418910602 24.926512462680986 24.957288065393843 25.792256053014572 37 25.727549370962453 24.62134068121286 24.815488072159553 24.835621875665133 38 25.087581037626773 24.18847324248299 25.231392265256936 25.49255345463331 39 25.45890162736785 24.6386023849654 24.380605042596887 25.521890945069863 40 25.743935480530837 25.098223068471405 24.70993275386996 24.4479086971278 41 24.880348370321794 24.846983973584603 25.12511648776447 25.147551168329134 42 25.84195978381861 25.322503171101413 24.543605880271866 24.29193116480811 43 25.27986469850547 24.400577562502157 25.157046377578606 25.162511361413763 44 25.14388768563022 24.82778060615474 24.462200899136242 25.566130809078803 45 25.27683979820176 25.419214551562668 24.49305959030586 24.810886059929704 46 24.829149313145724 24.96289606295589 24.83864101797096 25.369313605927424 47 25.056446393902355 24.807938448263464 25.243977852879844 24.89163730495434 48 25.9415646051095 25.451726657193973 23.90110048149661 24.705608256199916 49 24.82116713789761 25.239953864429303 24.60429544022941 25.334583557443676 50 25.866983441241864 24.94628542501388 24.385410344837506 24.801320788906754 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 7.0 1 7.0 2 7.0 3 11.5 4 16.0 5 22.5 6 29.0 7 32.5 8 36.0 9 52.0 10 68.0 11 103.5 12 139.0 13 224.5 14 310.0 15 441.5 16 573.0 17 704.5 18 836.0 19 937.5 20 1039.0 21 1276.5 22 1514.0 23 1879.5 24 2245.0 25 2780.0 26 3315.0 27 3783.5 28 4252.0 29 4775.5 30 5299.0 31 5657.5 32 6016.0 33 6759.5 34 7503.0 35 8328.0 36 9153.0 37 10240.0 38 11327.0 39 12818.5 40 14310.0 41 15289.0 42 16268.0 43 16726.5 44 17185.0 45 18422.5 46 19660.0 47 20839.5 48 22019.0 49 22991.5 50 23964.0 51 23368.5 52 22773.0 53 23138.0 54 23503.0 55 24393.0 56 25283.0 57 24817.0 58 24351.0 59 22351.0 60 20351.0 61 18711.5 62 17072.0 63 14882.5 64 12693.0 65 11072.0 66 9451.0 67 8361.5 68 7272.0 69 6850.5 70 6429.0 71 4989.5 72 3550.0 73 3136.0 74 2722.0 75 2155.5 76 1589.0 77 1391.5 78 1194.0 79 1059.0 80 924.0 81 746.5 82 569.0 83 484.5 84 400.0 85 294.0 86 188.0 87 141.5 88 95.0 89 71.5 90 48.0 91 36.5 92 25.0 93 26.0 94 27.0 95 21.5 96 16.0 97 21.5 98 27.0 99 31.5 100 36.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.012080143120933737 2 0.0023009796420826165 3 2.8762245526032707E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 2.8762245526032707E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 2.8762245526032707E-4 24 8.628673657809813E-4 25 0.0 26 0.0 27 2.8762245526032707E-4 28 0.0011504898210413083 29 5.752449105206541E-4 30 0.0014381122763016355 31 5.752449105206541E-4 32 2.8762245526032707E-4 33 0.0 34 8.628673657809813E-4 35 0.0 36 0.0 37 0.0011504898210413083 38 0.0 39 0.0 40 0.0 41 5.752449105206541E-4 42 0.0020133571868222898 43 0.002876224552603271 44 0.0031638470078635982 45 0.0011504898210413083 46 0.0017257347315619625 47 8.628673657809813E-4 48 0.003451469463123925 49 0.0020133571868222898 50 0.0020133571868222898 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 347678.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 71.19127522718553 #Duplication Level Percentage of deduplicated Percentage of total 1 88.01255851561575 62.657262767339716 2 7.3732963710703645 10.49828742568957 3 1.9553533201811926 4.17612289150231 4 0.8408372741935468 2.3944111123355705 5 0.4491255736836594 1.5986911163840494 6 0.27339307644006877 1.1677921050031144 7 0.19097810333087648 0.9517182301616013 8 0.12978330507395835 0.7391551193131162 9 0.09845014020762864 0.6307911924908666 >10 0.5858882374859065 7.7285284834153885 >50 0.0559030467040048 2.767697734654387 >100 0.03402794147174261 4.5450574448160905 >500 4.050945413302691E-4 0.1444843768942171 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 501 0.14409885008542386 No Hit GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG 482 0.13863402343547765 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 479 0.13777115606969667 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 471 0.13547017642761405 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 417 0.1199385638435564 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 393 0.11303562491730855 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 388 0.1115975126410069 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 365 0.10498219617001939 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 5.752449105206541E-4 7 0.0 0.0 0.0 0.0 5.752449105206541E-4 8 0.0 0.0 0.0 0.0 5.752449105206541E-4 9 0.0 0.0 0.0 0.0 5.752449105206541E-4 10 0.0 0.0 0.0 0.0 5.752449105206541E-4 11 0.0 0.0 0.0 0.0 5.752449105206541E-4 12 0.0 0.0 0.0 0.0 0.0011504898210413083 13 0.0 0.0 0.0 0.0 0.0011504898210413083 14 0.0 0.0 0.0 0.0 0.0011504898210413083 15 0.0 0.0 0.0 0.0 0.0011504898210413083 16 0.0 0.0 0.0 0.0 0.0011504898210413083 17 0.0 0.0 0.0 0.0 0.0011504898210413083 18 0.0 0.0 0.0 0.0 0.0011504898210413083 19 0.0 0.0 0.0 0.0 0.0011504898210413083 20 0.0 0.0 0.0 0.0 0.0011504898210413083 21 0.0 0.0 0.0 0.0 0.0011504898210413083 22 0.0 0.0 0.0 0.0 0.0014381122763016355 23 0.0 0.0 0.0 0.0 0.0017257347315619625 24 0.0 0.0 0.0 0.0 0.0017257347315619625 25 0.0 0.0 0.0 0.0 0.0017257347315619625 26 0.0 0.0 0.0 2.8762245526032707E-4 0.0020133571868222898 27 0.0 0.0 0.0 2.8762245526032707E-4 0.0020133571868222898 28 0.0 0.0 0.0 5.752449105206541E-4 0.0020133571868222898 29 0.0 0.0 0.0 8.628673657809813E-4 0.0020133571868222898 30 0.0 0.0 0.0 0.0014381122763016355 0.0020133571868222898 31 0.0 0.0 0.0 0.0017257347315619625 0.0023009796420826165 32 0.0 0.0 0.0 0.003163847007863598 0.0025886020973429438 33 0.0 0.0 0.0 0.004314336828904906 0.0025886020973429438 34 0.0 0.0 0.0 0.0051772041946858876 0.0025886020973429438 35 0.0 0.0 0.0 0.006615316470987523 0.0025886020973429438 36 0.0 0.0 0.0 0.008053428747289159 0.0025886020973429438 37 0.0 0.0 0.0 0.010642030844632102 0.0025886020973429438 38 0.0 0.0 0.0 0.013518255397235373 0.0025886020973429438 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 445 0.0 30.159866 1 CTACACG 30 0.0057411077 29.331608 4 ACCGTCG 120 0.0 27.498383 8 CGGTCCA 105 3.6379788E-12 27.236492 10 CGAATGC 100 6.002665E-11 26.402246 43 CGCCGGT 120 0.0 25.665157 7 CGCAATA 130 0.0 25.386772 36 TCTTGCG 125 1.8189894E-12 24.63855 2 CGTCGTA 125 1.8189894E-12 24.63855 10 GTATTAC 45 0.0013955217 24.446524 1 ATTAGCA 45 0.0013966919 24.443007 2 TACGAAT 110 2.0008883E-10 24.00204 41 TACCGTC 120 2.3646862E-11 23.831932 7 GCGCAAT 130 1.8189894E-12 23.69432 35 CCGGTCC 130 1.8189894E-12 23.690914 9 ATACGAA 125 4.0017767E-11 22.881945 40 GTCGTAG 140 7.2759576E-12 21.998705 11 ATACCGT 130 6.730261E-11 21.998705 6 GGTATCA 155 1.8189894E-12 21.292133 1 CTAGCGG 135 1.1277734E-10 21.186985 29 >>END_MODULE