##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062282_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2123655 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.281846627630195 32.0 32.0 32.0 32.0 32.0 2 31.42611299858028 32.0 32.0 32.0 32.0 32.0 3 31.55987672197226 32.0 32.0 32.0 32.0 32.0 4 31.63737000595671 32.0 32.0 32.0 32.0 32.0 5 31.61203020264591 32.0 32.0 32.0 32.0 32.0 6 35.24959138843174 36.0 36.0 36.0 36.0 36.0 7 35.25560131000563 36.0 36.0 36.0 36.0 36.0 8 35.203595216737185 36.0 36.0 36.0 36.0 36.0 9 35.291589735620896 36.0 36.0 36.0 36.0 36.0 10 35.16984726803553 36.0 36.0 36.0 36.0 36.0 11 35.29451676472873 36.0 36.0 36.0 36.0 36.0 12 35.212440344594576 36.0 36.0 36.0 36.0 36.0 13 35.2502261431353 36.0 36.0 36.0 36.0 36.0 14 35.215187966030264 36.0 36.0 36.0 36.0 36.0 15 35.190245590738606 36.0 36.0 36.0 36.0 36.0 16 35.20555645808759 36.0 36.0 36.0 36.0 36.0 17 35.18232999239519 36.0 36.0 36.0 36.0 36.0 18 35.17747374220389 36.0 36.0 36.0 36.0 36.0 19 35.17471387772496 36.0 36.0 36.0 36.0 36.0 20 35.17173787644415 36.0 36.0 36.0 36.0 36.0 21 35.165898886589396 36.0 36.0 36.0 36.0 36.0 22 35.145868796956194 36.0 36.0 36.0 36.0 36.0 23 35.116545766614635 36.0 36.0 36.0 36.0 36.0 24 35.09743531788355 36.0 36.0 36.0 36.0 36.0 25 35.088161683512624 36.0 36.0 36.0 36.0 36.0 26 35.04234350683138 36.0 36.0 36.0 36.0 36.0 27 35.02814958173526 36.0 36.0 36.0 36.0 36.0 28 35.00906126465928 36.0 36.0 36.0 36.0 36.0 29 34.99541215498751 36.0 36.0 36.0 36.0 36.0 30 34.97615761505518 36.0 36.0 36.0 36.0 36.0 31 34.97310956817374 36.0 36.0 36.0 36.0 36.0 32 34.94812104602678 36.0 36.0 36.0 36.0 36.0 33 34.93084281580577 36.0 36.0 36.0 36.0 36.0 34 34.921489130767476 36.0 36.0 36.0 36.0 36.0 35 34.91232191669551 36.0 36.0 36.0 36.0 36.0 36 34.88971089936925 36.0 36.0 36.0 32.0 36.0 37 34.88145485024639 36.0 36.0 36.0 32.0 36.0 38 34.86025272466573 36.0 36.0 36.0 32.0 36.0 39 34.84410980126245 36.0 36.0 36.0 32.0 36.0 40 34.83264324949203 36.0 36.0 36.0 32.0 36.0 41 34.805792372113174 36.0 36.0 36.0 32.0 36.0 42 34.77516781209754 36.0 36.0 36.0 32.0 36.0 43 34.77822574759083 36.0 36.0 36.0 32.0 36.0 44 34.73290765213747 36.0 36.0 36.0 32.0 36.0 45 34.71806060777292 36.0 36.0 36.0 32.0 36.0 46 34.70332798877407 36.0 36.0 36.0 32.0 36.0 47 34.67739722318362 36.0 36.0 36.0 32.0 36.0 48 34.65530700608149 36.0 36.0 36.0 32.0 36.0 49 34.64065726306768 36.0 36.0 36.0 32.0 36.0 50 34.22110041414448 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 7.0 20 19.0 21 62.0 22 148.0 23 407.0 24 1043.0 25 2509.0 26 5033.0 27 9451.0 28 16329.0 29 26107.0 30 39230.0 31 57820.0 32 89048.0 33 152785.0 34 349842.0 35 1373812.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.27415438400474 17.56074836350242 11.924752906175708 26.240344346317134 2 16.223513966091097 19.856779049639 36.889872347158466 27.02983463711143 3 18.71195226327527 23.379957507082153 28.284913507323246 29.62317672231933 4 12.541820587618988 15.88374759553694 35.6047945640888 35.96963725275527 5 14.749994702529365 36.58937068403295 33.10561272899788 15.555021884439798 6 35.103084263845616 34.931869690452906 16.556251474465437 13.408794571236045 7 31.010545498209456 30.07206914494115 19.96538985852222 18.951995498327175 8 28.43442084519378 32.95186835903195 18.869307867803386 19.74440292797088 9 27.258900339273563 14.374227452199156 18.22555923631663 40.14131297221065 10 16.08196634853545 26.76121134724522 31.216696520898907 25.940125783320433 11 37.44746674954265 21.25269876698428 21.95606160134297 19.3437728821301 12 24.82173422707549 23.44283793742392 28.466394023511356 23.269033811989235 13 29.461753439235654 19.374757199262593 25.0828877571922 26.08060160430955 14 23.71510438371581 19.356204279885386 24.98560265203152 31.943088684367282 15 25.2869227817136 26.822953822537087 21.976686420346052 25.913436975403254 16 25.982685430003606 25.902210586044276 23.20336026030716 24.91174372364496 17 24.340959336615413 25.929588374759554 24.795694215868398 24.93375807275664 18 24.95285246695199 25.31322207535788 25.453357963848145 24.28056749384198 19 25.790877421651548 25.07927374233279 25.132060119021272 23.99778871699439 20 25.832824381829937 24.459196843919916 24.727697211448042 24.980281562802105 21 26.645759315896417 24.358523394807538 24.506758395313742 24.48895889398231 22 25.88508962143098 24.2956600766132 24.949862383485076 24.86938791847075 23 24.623396217175046 24.304464339950396 25.246897913075173 25.825241529799385 24 24.731286087904035 24.922703253008756 25.20462565583335 25.14138500325386 25 25.12875232323955 24.378723245957083 25.14273767205629 25.349786758747083 26 24.91243816048091 25.21182948915118 25.290985957143437 24.58474639322447 27 25.363019371863594 24.88280773593728 24.756327205039256 24.997845687159874 28 24.9549941962173 24.701746785551997 25.31866651911952 25.024592499111186 29 24.790619528866863 25.041414623717888 25.200433593922906 24.96753225349234 30 24.895991621880867 24.939690444696737 25.406439078049015 24.757878855373377 31 25.345938070657724 24.79627018815754 24.632542335210296 25.22524940597444 32 25.254658537182596 24.785508573064586 24.546530748323153 25.413302141429668 33 24.81481150115815 24.637380882981024 24.991582876061795 25.55622473979903 34 25.369342609239425 24.721868793080553 25.253362390388567 24.655426207291452 35 25.851729734998578 24.421596977654968 25.210945876649106 24.51572741069734 36 24.832893917126682 25.010983443136368 24.838262030813915 25.31786060892303 37 25.64224030559125 24.86634856219636 24.866960724159348 24.62445040805304 38 25.01559810797893 24.629283005007878 25.152720192309957 25.202398694703238 39 25.54717578186804 24.691801592742998 24.676120909837486 25.08490171555147 40 25.675463140417413 24.721211647471762 24.947425522236674 24.65589968987415 41 24.743435074028763 25.313448550927326 25.181928712763124 24.76118766228079 42 25.818892810017996 25.030161927876964 24.92208757272062 24.228857689384416 43 25.437047459746992 24.203792861825004 25.13642134370079 25.22273833472721 44 24.867393241199263 24.988227382918968 24.929599749855434 25.214779626026335 45 25.196975718728282 25.101007151965614 24.80081107094893 24.901206058357175 46 24.975124846664045 24.97747933349187 24.898368576077 25.149027243767087 47 25.05177455583129 24.8677500317852 25.188427362581994 24.892048049801517 48 25.78370533338733 25.2694288757684 24.352857410600848 24.59400838024342 49 25.08356227214035 25.291514367813384 24.58275372651474 25.042169633531525 50 25.28082824259793 25.27998063691916 24.50908327207813 24.930107848404784 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 114.0 1 87.5 2 61.0 3 141.0 4 221.0 5 252.0 6 283.0 7 221.5 8 160.0 9 232.5 10 305.0 11 527.5 12 750.0 13 1316.0 14 1882.0 15 2564.5 16 3247.0 17 3293.5 18 3340.0 19 3378.0 20 3416.0 21 4261.5 22 5107.0 23 6294.5 24 7482.0 25 9744.0 26 12006.0 27 14915.0 28 17824.0 29 21438.5 30 25053.0 31 28550.5 32 32048.0 33 36563.5 34 41079.0 35 47378.5 36 53678.0 37 63776.5 38 73875.0 39 82173.5 40 90472.0 41 99041.5 42 107611.0 43 113590.0 44 119569.0 45 130461.0 46 141353.0 47 149383.5 48 157414.0 49 163810.0 50 170206.0 51 166746.0 52 163286.0 53 162079.0 54 160872.0 55 161884.5 56 162897.0 57 156617.5 58 150338.0 59 136180.5 60 122023.0 61 107273.0 62 92523.0 63 78822.5 64 65122.0 65 54818.0 66 44514.0 67 38026.0 68 31538.0 69 27655.5 70 23773.0 71 18783.5 72 13794.0 73 11971.5 74 10149.0 75 7428.0 76 4707.0 77 4193.5 78 3680.0 79 3112.0 80 2544.0 81 1997.0 82 1450.0 83 1231.0 84 1012.0 85 780.5 86 549.0 87 366.0 88 183.0 89 117.5 90 52.0 91 37.5 92 23.0 93 27.5 94 32.0 95 26.0 96 20.0 97 18.0 98 16.0 99 9.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03183191243398763 2 0.003908356112457061 3 3.296203950264991E-4 4 0.0 5 0.0 6 1.8835451144371377E-4 7 0.0 8 0.0 9 0.0 10 1.4126588358278534E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.708862786092844E-4 17 0.0 18 9.417725572185689E-5 19 4.7088627860928444E-5 20 3.7670902288742755E-4 21 0.0 22 0.0 23 1.8835451144371377E-4 24 9.888611850794973E-4 25 1.8835451144371377E-4 26 6.121521621920698E-4 27 3.7670902288742755E-4 28 0.0018835451144371376 29 4.2379765074835603E-4 30 0.0013184815801059965 31 4.2379765074835603E-4 32 0.001271392952245068 33 3.7670902288742755E-4 34 8.005066736357836E-4 35 2.825317671655707E-4 36 1.8835451144371377E-4 37 0.0016010133472715673 38 0.0 39 0.0010830384408013543 40 4.7088627860928444E-5 41 9.888611850794973E-4 42 0.005509369459728628 43 0.004096710623900775 44 0.003908356112457061 45 0.0020248109980199234 46 0.0023544313930464224 47 0.0011772156965232112 48 0.004190887879622632 49 0.004190887879622632 50 0.0012243043243841396 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2123655.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.27035128293355 #Duplication Level Percentage of deduplicated Percentage of total 1 73.75456724788502 39.2893170601558 2 15.269190385630216 16.267902712970265 3 5.095452516252851 8.14309636458891 4 2.1416739537600082 4.563508954012193 5 1.083717624135375 2.8865009264598784 6 0.6527864196015009 2.0864497130940243 7 0.40324068561399695 1.5036541081960009 8 0.28693481224847983 1.2228094595023282 9 0.19222074987955864 0.9215700182957696 >10 0.9743195696111993 9.20045934899016 >50 0.0745299644676981 2.7719942353199736 >100 0.06122497859841355 6.510401844364103 >500 0.007561340761790632 2.72668709738808 >1k 0.0025797515540226658 1.9056481566625576 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.7088627860928444E-5 2 0.0 0.0 0.0 0.0 4.7088627860928444E-5 3 0.0 0.0 0.0 0.0 4.7088627860928444E-5 4 0.0 0.0 0.0 0.0 4.7088627860928444E-5 5 0.0 0.0 0.0 0.0 4.7088627860928444E-5 6 0.0 0.0 0.0 0.0 4.7088627860928444E-5 7 0.0 0.0 0.0 0.0 4.7088627860928444E-5 8 0.0 0.0 0.0 0.0 4.7088627860928444E-5 9 0.0 0.0 0.0 0.0 4.7088627860928444E-5 10 0.0 0.0 0.0 0.0 4.7088627860928444E-5 11 0.0 0.0 0.0 0.0 4.7088627860928444E-5 12 0.0 0.0 0.0 0.0 2.3544313930464223E-4 13 0.0 0.0 0.0 4.7088627860928444E-5 2.825317671655707E-4 14 0.0 0.0 0.0 9.417725572185689E-5 2.825317671655707E-4 15 0.0 0.0 0.0 2.3544313930464223E-4 3.7670902288742755E-4 16 0.0 0.0 0.0 3.296203950264991E-4 3.7670902288742755E-4 17 0.0 0.0 0.0 3.296203950264991E-4 3.7670902288742755E-4 18 0.0 0.0 0.0 4.2379765074835603E-4 4.2379765074835603E-4 19 0.0 0.0 0.0 5.17974906470213E-4 4.7088627860928446E-4 20 0.0 0.0 0.0 6.592407900529982E-4 6.121521621920698E-4 21 0.0 0.0 0.0 7.534180457748551E-4 6.592407900529982E-4 22 0.0 0.0 0.0 8.475953014967121E-4 7.534180457748551E-4 23 0.0 0.0 0.0 0.0012243043243841396 7.534180457748551E-4 24 0.0 0.0 0.0 0.0017422792308543526 7.534180457748551E-4 25 0.0 0.0 0.0 0.0025898745323510645 7.534180457748551E-4 26 0.0 0.0 0.0 0.0032962039502649914 9.417725572185689E-4 27 0.0 0.0 0.0 0.003814178856735204 9.888611850794975E-4 28 0.0 0.0 0.0 0.004661774158231916 9.888611850794975E-4 29 0.0 0.0 0.0 0.0061686102497816265 9.888611850794975E-4 30 0.0 0.0 0.0 0.00819342124780155 9.888611850794975E-4 31 0.0 0.0 0.0 0.011583802453788398 9.888611850794975E-4 32 0.0 0.0 0.0 0.01662228563490774 9.888611850794975E-4 33 0.0 0.0 0.0 0.02123697116527873 9.888611850794975E-4 34 0.0 0.0 0.0 0.02571039081206693 0.0010830384408013543 35 0.0 0.0 0.0 0.030654696737464418 0.0010830384408013543 36 0.0 0.0 0.0 0.037859256800186473 0.0010830384408013543 37 0.0 0.0 0.0 0.0491605274868093 0.0010830384408013543 38 0.0 0.0 0.0 0.06427597703016732 0.0010830384408013543 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2355 0.0 27.475378 1 GGTATCA 1165 0.0 23.23627 1 GTACGTA 65 4.934566E-4 20.307257 11 TCAACGC 3510 0.0 18.301603 4 ATCAACG 3580 0.0 18.005201 3 CGTCTTA 160 1.1041266E-9 17.874617 15 CGCAATA 445 0.0 17.79821 36 AACGCAG 3665 0.0 17.527592 6 CAACGCA 3655 0.0 17.515356 5 CGTCGTA 560 0.0 17.285343 10 TATCAAC 3760 0.0 17.260267 2 CTAGCGG 460 0.0 17.217024 29 TCTAGCG 485 0.0 16.783146 28 CTGTACG 145 1.250828E-7 16.689299 9 TACGAAT 480 0.0 16.500813 41 CGAATGC 485 0.0 16.3307 43 TAGCGGC 500 0.0 15.839662 30 ATACCGT 575 0.0 15.686621 6 ATACGAA 535 0.0 15.626569 40 ACCGTCG 560 0.0 15.3211 8 >>END_MODULE