##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062280_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1081014 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29135145335768 32.0 32.0 32.0 32.0 32.0 2 31.493433942576136 32.0 32.0 32.0 32.0 32.0 3 31.598815556505283 32.0 32.0 32.0 32.0 32.0 4 31.67408007666876 32.0 32.0 32.0 32.0 32.0 5 31.652855559687477 32.0 32.0 32.0 32.0 32.0 6 35.317355741923784 36.0 36.0 36.0 36.0 36.0 7 35.31262592343855 36.0 36.0 36.0 36.0 36.0 8 35.27296038719202 36.0 36.0 36.0 36.0 36.0 9 35.34143591109829 36.0 36.0 36.0 36.0 36.0 10 35.24249547184403 36.0 36.0 36.0 36.0 36.0 11 35.34660975713543 36.0 36.0 36.0 36.0 36.0 12 35.27804542771879 36.0 36.0 36.0 36.0 36.0 13 35.30048362000862 36.0 36.0 36.0 36.0 36.0 14 35.26242953375257 36.0 36.0 36.0 36.0 36.0 15 35.252665552897554 36.0 36.0 36.0 36.0 36.0 16 35.258809784147104 36.0 36.0 36.0 36.0 36.0 17 35.24211712336751 36.0 36.0 36.0 36.0 36.0 18 35.238288310789684 36.0 36.0 36.0 36.0 36.0 19 35.222881479795824 36.0 36.0 36.0 36.0 36.0 20 35.214160038630396 36.0 36.0 36.0 36.0 36.0 21 35.20428412583001 36.0 36.0 36.0 36.0 36.0 22 35.19909270370226 36.0 36.0 36.0 36.0 36.0 23 35.17504861176636 36.0 36.0 36.0 36.0 36.0 24 35.15774078781588 36.0 36.0 36.0 36.0 36.0 25 35.14999805737946 36.0 36.0 36.0 36.0 36.0 26 35.10875992355326 36.0 36.0 36.0 36.0 36.0 27 35.09867587283791 36.0 36.0 36.0 36.0 36.0 28 35.08563163844317 36.0 36.0 36.0 36.0 36.0 29 35.062791046184415 36.0 36.0 36.0 36.0 36.0 30 35.04527230914678 36.0 36.0 36.0 36.0 36.0 31 35.049432292273735 36.0 36.0 36.0 36.0 36.0 32 35.028126370241274 36.0 36.0 36.0 36.0 36.0 33 34.98982621871687 36.0 36.0 36.0 36.0 36.0 34 34.968251104981064 36.0 36.0 36.0 36.0 36.0 35 34.96264340702341 36.0 36.0 36.0 36.0 36.0 36 34.95132995502371 36.0 36.0 36.0 36.0 36.0 37 34.935631730948906 36.0 36.0 36.0 36.0 36.0 38 34.917548708897385 36.0 36.0 36.0 36.0 36.0 39 34.90104660994215 36.0 36.0 36.0 36.0 36.0 40 34.88295711248883 36.0 36.0 36.0 36.0 36.0 41 34.85088167220776 36.0 36.0 36.0 32.0 36.0 42 34.82285428310826 36.0 36.0 36.0 32.0 36.0 43 34.80320328876407 36.0 36.0 36.0 32.0 36.0 44 34.75960070822394 36.0 36.0 36.0 32.0 36.0 45 34.730738917349825 36.0 36.0 36.0 32.0 36.0 46 34.696186173352054 36.0 36.0 36.0 32.0 36.0 47 34.670446451202295 36.0 36.0 36.0 32.0 36.0 48 34.63209727163571 36.0 36.0 36.0 32.0 36.0 49 34.608068905675594 36.0 36.0 36.0 32.0 36.0 50 34.199491403441584 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 8.0 21 38.0 22 73.0 23 211.0 24 520.0 25 1193.0 26 2397.0 27 4775.0 28 8100.0 29 12664.0 30 19410.0 31 28315.0 32 42465.0 33 72173.0 34 166031.0 35 722638.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.06702181901296 17.74484737610152 12.417839789092437 25.770291015793084 2 16.557613478992497 19.482113766234246 36.62660700425821 27.333665750515046 3 18.72752686600439 23.012674223159205 28.193555489156928 30.066243421679477 4 13.065615307123965 15.463551317144198 34.13668475772262 37.334148618009216 5 15.383704558867878 36.068358041616484 32.17127622768993 16.376661171825713 6 35.86583682697324 33.97418345032248 15.852275460401918 14.307704262302362 7 31.3472350959377 29.97657754663677 19.54396520304085 19.132222154384678 8 29.010262586793512 32.410773588501165 18.421778071329324 20.157185753375998 9 27.235632470994826 14.349767903098387 18.40281439463319 40.0117852312736 10 17.26954254944205 26.490615746526636 29.720456645757267 26.519385058274047 11 37.5663034891315 21.334506306116293 21.186959650846333 19.912230553905868 12 25.014222770678984 23.505360250061745 27.72085072057413 23.75956625868514 13 29.805164410451667 19.34322774728172 24.89940000777048 25.952207834496132 14 24.052139935282984 19.155071072160027 24.680623932715026 32.11216505984196 15 25.53935471696019 26.78198432212719 21.943101569452384 25.73555939146024 16 26.260538794419276 25.63926564699918 23.033729692527146 25.0664658660544 17 24.56822945863791 25.80688131698572 24.57081961935738 25.05406960501899 18 25.13297700122293 24.75943882317898 25.722423576382912 24.38516059921518 19 25.811044075284872 24.562494102759075 25.233623246322434 24.39283857563362 20 26.281484386852323 23.81758944396547 24.8785397386893 25.02238643049291 21 27.083368022985827 23.707001019413255 24.604491708710523 24.605139248890392 22 26.520840618160356 23.53919560708742 25.057399811658314 24.882563963093908 23 24.924214602414587 23.907945602874342 25.657785799060694 25.510053995650377 24 25.10825594378554 24.33147734095095 25.48124288276721 25.0790238324963 25 25.284339781297728 23.887871838729044 25.348353812581347 25.479434567391877 26 24.97016678846634 24.783119490106476 25.603185909473545 24.643527811953636 27 25.395277758248753 24.285761860182866 25.213503642882777 25.1054567386856 28 25.07779833487512 24.15013876040703 25.636817761332097 25.135245143385752 29 24.85802642156278 24.46247077966829 25.745436447917736 24.934066350851193 30 24.92990280287031 24.522224349883764 25.614639791526173 24.933233055719757 31 25.53028915444203 24.29237734201407 24.758513765779167 25.418819737764732 32 25.41859079673786 24.256527241241507 24.85097242573598 25.47390953628465 33 24.953377020791628 24.083358926635412 25.29740650427562 25.66585754829734 34 25.678049592740088 24.23060022849108 25.26130776453393 24.830042414234903 35 25.986531114420774 24.15750085568126 25.14574333262412 24.710224697273848 36 24.840797326949193 24.708328862214294 25.173818607008986 25.277055203827526 37 25.805920444033305 24.377798334875113 24.880296022201666 24.935985198889917 38 25.082283855713243 24.302552973412002 25.35785845511714 25.257304715757613 39 25.573908796234623 24.313233574589642 24.853655107085242 25.259202522090497 40 25.767658883233707 24.42068280336795 25.06831548897609 24.743342824422253 41 24.90531967445139 24.877012708532607 25.39495617970668 24.822711437309323 42 26.062353083749546 24.743541235535023 24.819676347142806 24.37442933357262 43 25.551009231515 24.124051431537016 24.982446337598326 25.34249299934966 44 25.12555748076512 24.6742998707653 24.841185628953014 25.35895701951657 45 25.330044986581733 24.870095810410653 24.612923905793675 25.186935297213942 46 25.14805762822873 24.644911461445812 24.860638040033376 25.346392870292085 47 25.344472391792422 24.625694148294038 25.068339437243814 24.96149402266973 48 25.878119290455377 25.05904391868452 24.154767686579245 24.90806910428086 49 25.30840270756069 25.22754962427369 24.232335127704392 25.23171254046123 50 25.440425531914894 25.19935245143386 24.300555041628122 25.059666975023127 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 34.0 1 46.5 2 59.0 3 147.0 4 235.0 5 232.0 6 229.0 7 199.5 8 170.0 9 232.0 10 294.0 11 538.0 12 782.0 13 1452.0 14 2122.0 15 2867.5 16 3613.0 17 3717.5 18 3822.0 19 3653.0 20 3484.0 21 3617.0 22 3750.0 23 4061.0 24 4372.0 25 4882.0 26 5392.0 27 6484.0 28 7576.0 29 8889.5 30 10203.0 31 12076.5 32 13950.0 33 16270.5 34 18591.0 35 21584.5 36 24578.0 37 28709.0 38 32840.0 39 37149.5 40 41459.0 41 45558.0 42 49657.0 43 52661.0 44 55665.0 45 62146.0 46 68627.0 47 73524.0 48 78421.0 49 82135.5 50 85850.0 51 84416.0 52 82982.0 53 83304.5 54 83627.0 55 84124.5 56 84622.0 57 82171.0 58 79720.0 59 73096.5 60 66473.0 61 58791.0 62 51109.0 63 44377.5 64 37646.0 65 31675.5 66 25705.0 67 22178.5 68 18652.0 69 16368.5 70 14085.0 71 10755.0 72 7425.0 73 6534.0 74 5643.0 75 4200.0 76 2757.0 77 2345.0 78 1933.0 79 1564.5 80 1196.0 81 962.5 82 729.0 83 626.5 84 524.0 85 388.0 86 252.0 87 167.0 88 82.0 89 59.0 90 36.0 91 23.5 92 11.0 93 11.0 94 11.0 95 10.5 96 10.0 97 6.5 98 3.0 99 4.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03246951473338921 2 0.0039777468191901305 3 9.250573998116583E-5 4 9.250573998116583E-5 5 0.0 6 1.8501147996233166E-4 7 0.0 8 0.0 9 0.0 10 9.250573998116583E-5 11 0.0 12 9.250573998116583E-5 13 0.0 14 0.0 15 0.0 16 7.400459198493266E-4 17 0.0 18 0.0 19 0.0 20 1.8501147996233166E-4 21 0.0 22 0.0 23 9.250573998116583E-5 24 0.0010175631397928242 25 9.250573998116583E-5 26 3.700229599246633E-4 27 1.8501147996233166E-4 28 0.0012950803597363216 29 2.7751721994349746E-4 30 0.0013875860997174874 31 0.0 32 5.550344398869949E-4 33 1.8501147996233166E-4 34 8.325516598304925E-4 35 3.700229599246633E-4 36 1.8501147996233166E-4 37 0.0012950803597363216 38 0.0 39 5.550344398869949E-4 40 0.0 41 7.400459198493266E-4 42 0.003792735339227799 43 0.0039777468191901305 44 0.003237700899340804 45 0.0023126434995291456 46 0.0014800918396986533 47 0.0012025746197551557 48 0.0036077238592654676 49 0.003792735339227799 50 0.0012950803597363216 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1081014.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.84488036122498 #Duplication Level Percentage of deduplicated Percentage of total 1 78.21985442414821 45.246181210372875 2 13.03739591546916 15.082932139044736 3 3.8036459188817426 6.600643293425282 4 1.6223172305551494 3.7537098443766586 5 0.8843750537929709 2.5578284590553153 6 0.5516561592502065 1.914629071941664 7 0.34733136773880957 1.406393898878645 8 0.25039208321369305 1.158712007751517 9 0.19732278365417033 1.0272701531717425 >10 0.9512766001321584 9.712832541356763 >50 0.07101483197547975 2.8465646099562267 >100 0.058266962092686794 6.513990132888887 >500 0.0046677938679202365 1.8666861888718305 >1k 4.828752277158866E-4 0.31162644890787655 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1320 0.1221075767751389 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 9.250573998116583E-5 0.0 0.0 0.0 0.0 7 9.250573998116583E-5 0.0 0.0 0.0 0.0 8 9.250573998116583E-5 0.0 0.0 0.0 0.0 9 9.250573998116583E-5 0.0 0.0 0.0 0.0 10 9.250573998116583E-5 0.0 0.0 0.0 0.0 11 9.250573998116583E-5 0.0 0.0 0.0 0.0 12 9.250573998116583E-5 0.0 0.0 0.0 0.0 13 9.250573998116583E-5 0.0 0.0 0.0 9.250573998116583E-5 14 2.775172199434975E-4 0.0 0.0 0.0 9.250573998116583E-5 15 2.775172199434975E-4 0.0 0.0 0.0 9.250573998116583E-5 16 2.775172199434975E-4 0.0 0.0 0.0 9.250573998116583E-5 17 2.775172199434975E-4 0.0 0.0 0.0 9.250573998116583E-5 18 2.775172199434975E-4 0.0 0.0 0.0 9.250573998116583E-5 19 5.55034439886995E-4 0.0 0.0 0.0 9.250573998116583E-5 20 5.55034439886995E-4 0.0 0.0 0.0 1.8501147996233166E-4 21 5.55034439886995E-4 0.0 0.0 9.250573998116583E-5 1.8501147996233166E-4 22 5.55034439886995E-4 0.0 0.0 1.8501147996233166E-4 1.8501147996233166E-4 23 5.55034439886995E-4 0.0 0.0 5.55034439886995E-4 2.775172199434975E-4 24 5.55034439886995E-4 0.0 0.0 8.325516598304925E-4 2.775172199434975E-4 25 5.55034439886995E-4 0.0 0.0 0.00111006887977399 2.775172199434975E-4 26 5.55034439886995E-4 0.0 0.0 0.0012025746197551557 2.775172199434975E-4 27 5.55034439886995E-4 0.0 0.0 0.0014800918396986533 2.775172199434975E-4 28 8.325516598304925E-4 0.0 0.0 0.00222013775954798 2.775172199434975E-4 29 9.250573998116584E-4 0.0 0.0 0.0031451951593596383 2.775172199434975E-4 30 9.250573998116584E-4 0.0 0.0 0.0062903903187192765 2.775172199434975E-4 31 9.250573998116584E-4 0.0 0.0 0.011840734717589226 2.775172199434975E-4 32 9.250573998116584E-4 0.0 0.0 0.017483584856440342 2.775172199434975E-4 33 9.250573998116584E-4 0.0 0.0 0.021923860375536303 2.775172199434975E-4 34 9.250573998116584E-4 0.0 0.0 0.028121744954274414 4.625286999058292E-4 35 0.0010175631397928242 0.0 0.0 0.03644726155257934 4.625286999058292E-4 36 0.00111006887977399 0.0 0.0 0.05060063976969771 4.625286999058292E-4 37 0.00111006887977399 0.0 0.0 0.06586408686659007 4.625286999058292E-4 38 0.0012025746197551557 0.0 0.0 0.08704790132227705 4.625286999058292E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2270 0.0 23.461416 1 GGTATCA 1055 0.0 20.651302 1 AAAGCGT 65 4.9331324E-4 20.306816 6 TCTAGCG 200 0.0 18.699194 28 GATAGTC 85 1.4311279E-4 18.116867 7 CTAGCGG 210 0.0 17.808756 29 CTAGGAC 200 3.6379788E-12 17.599241 3 TACGAAT 215 0.0 17.397013 41 ATACGAA 215 0.0 17.397013 40 GGTCTAC 165 1.6516424E-9 17.339 1 CAAGCCG 115 4.271911E-6 17.217447 35 TACGCTA 230 0.0 17.21665 9 AACGCAG 3170 0.0 17.002422 6 CGCAATA 235 0.0 16.851116 36 TAGGACA 235 0.0 16.850338 4 CAATACG 250 0.0 16.7216 38 TAGCGGC 225 1.8189894E-12 16.621506 30 ACGCTAT 240 0.0 16.499289 10 ACCGTCG 280 0.0 16.499289 8 TATCAAC 3310 0.0 16.41621 2 >>END_MODULE