##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062279_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 30241 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.10786680334645 32.0 32.0 32.0 21.0 32.0 2 28.735127806620152 32.0 32.0 32.0 14.0 32.0 3 30.290830329684866 32.0 32.0 32.0 21.0 32.0 4 30.885486591051883 32.0 32.0 32.0 32.0 32.0 5 30.560265864224068 32.0 32.0 32.0 32.0 32.0 6 34.07248437551668 36.0 36.0 36.0 32.0 36.0 7 34.08594292516782 36.0 36.0 36.0 32.0 36.0 8 33.9588637941867 36.0 36.0 36.0 32.0 36.0 9 34.292946661816735 36.0 36.0 36.0 32.0 36.0 10 33.78763929764227 36.0 36.0 36.0 32.0 36.0 11 34.5638371746966 36.0 36.0 36.0 32.0 36.0 12 34.143546840382264 36.0 36.0 36.0 32.0 36.0 13 34.382692371284016 36.0 36.0 36.0 32.0 36.0 14 34.23203597764624 36.0 36.0 36.0 32.0 36.0 15 34.143546840382264 36.0 36.0 36.0 32.0 36.0 16 34.13852055156906 36.0 36.0 36.0 32.0 36.0 17 34.058066862868294 36.0 36.0 36.0 32.0 36.0 18 34.16593366621474 36.0 36.0 36.0 32.0 36.0 19 34.16507390628617 36.0 36.0 36.0 32.0 36.0 20 34.17773883138785 36.0 36.0 36.0 32.0 36.0 21 34.16375119870375 36.0 36.0 36.0 32.0 36.0 22 34.15971694057736 36.0 36.0 36.0 32.0 36.0 23 34.06669752984359 36.0 36.0 36.0 32.0 36.0 24 33.941701663304784 36.0 36.0 36.0 32.0 36.0 25 33.964121556826825 36.0 36.0 36.0 32.0 36.0 26 33.870903739955686 36.0 36.0 36.0 32.0 36.0 27 33.900036374458516 36.0 36.0 36.0 32.0 36.0 28 33.766145299427926 36.0 36.0 36.0 32.0 36.0 29 33.71578320822724 36.0 36.0 36.0 32.0 36.0 30 33.72355411527396 36.0 36.0 36.0 32.0 36.0 31 33.71383221454317 36.0 36.0 36.0 32.0 36.0 32 33.6473661585265 36.0 36.0 36.0 27.0 36.0 33 33.60222876227638 36.0 36.0 36.0 27.0 36.0 34 33.575113256836744 36.0 36.0 36.0 27.0 36.0 35 33.58837340035052 36.0 36.0 36.0 27.0 36.0 36 33.46450183525677 36.0 36.0 36.0 21.0 36.0 37 33.51549221255911 36.0 36.0 36.0 21.0 36.0 38 33.46972653020733 36.0 36.0 36.0 21.0 36.0 39 33.38537085413842 36.0 36.0 36.0 21.0 36.0 40 33.38619754637743 36.0 36.0 36.0 21.0 36.0 41 33.34605337125095 36.0 36.0 36.0 21.0 36.0 42 33.25852319698423 36.0 36.0 36.0 21.0 36.0 43 33.300750636553026 36.0 36.0 36.0 21.0 36.0 44 33.19364439006647 36.0 36.0 36.0 21.0 36.0 45 33.101319400813466 36.0 36.0 36.0 21.0 36.0 46 33.09427598293707 36.0 36.0 36.0 21.0 36.0 47 33.08233854700572 36.0 36.0 36.0 21.0 36.0 48 33.040706325849015 36.0 36.0 36.0 14.0 36.0 49 32.99682550180219 36.0 36.0 36.0 14.0 36.0 50 32.30660361760524 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 0.0 19 0.0 20 0.0 21 2.0 22 5.0 23 17.0 24 39.0 25 85.0 26 175.0 27 387.0 28 578.0 29 1039.0 30 1611.0 31 2562.0 32 3675.0 33 5484.0 34 7694.0 35 6887.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.64520289711281 17.333068756821113 13.278433707047657 25.743294639018423 2 19.75594431032772 19.68319058169913 34.88210588974503 25.678759218228116 3 23.104394695942595 21.54359974868556 27.879369068483186 27.472636486888664 4 16.907509672299195 15.743526999768525 34.800436493502204 32.54852683443008 5 21.513838828081084 30.85215435997487 30.504943619589298 17.129063192354753 6 36.71296296296296 34.910714285714285 14.249338624338625 14.126984126984127 7 30.627294070963263 29.55920769815813 18.38232862669885 21.431169604179757 8 29.159088654475713 31.8078105882742 16.937270592903676 22.095830164346417 9 25.690288019576073 13.303131510201382 16.84798783109024 44.1585926391323 10 16.451175556363875 24.84706193578255 29.91964551436791 28.782116993485662 11 39.122383519063526 19.665354981647432 20.52180814126517 20.690453358023873 12 24.532918884957507 22.562084587149897 26.84104361628253 26.063952911610066 13 30.29000363744585 17.68460037697166 23.726067259680566 28.299328725901923 14 24.159253992923517 17.843325286862207 23.76244171819715 34.23497900201713 15 26.17307628715982 25.43236004100394 20.601170596210444 27.793393075625804 16 26.81458946463411 25.20088621408022 22.25124830528091 25.733276016004762 17 24.88343639429913 26.34833504183063 22.82993287259019 25.93829569128005 18 25.746503091828977 24.56929334347409 24.519691809133295 25.16451175556364 19 25.607618795674746 25.283555437981548 24.546145960781722 24.562679805561984 20 26.302040276445886 23.18706391984392 23.95092754869217 26.559968255018024 21 26.920406071227802 24.073278000066136 23.527661122317383 25.47865480638868 22 25.868853543202935 23.99391554512086 24.278297675341424 25.858933236334774 23 25.181045600343904 23.798816176713732 24.761085942925167 26.259052280017197 24 24.747858867100955 24.70817763962832 24.46016996792434 26.083793525346383 25 25.20419298303628 24.212162296220363 24.539532422869613 26.044112297873745 26 25.319929896498135 24.205548758308257 23.924473397043748 26.550047948149864 27 25.74319632287292 23.831883866274264 24.876822856387022 25.548096954465795 28 25.091762838530475 23.89140570748322 25.07522899375021 25.9416024602361 29 25.280248669025497 24.595747495122517 24.876822856387022 25.247180979464968 30 25.419132965179724 24.07989153797824 25.45881419265236 25.042161304189676 31 25.395985582487352 24.394034588803283 24.23861644786879 25.97136338084058 32 25.839092622598457 24.747858867100955 24.00052908303297 25.412519427267615 33 24.718097946496478 24.56929334347409 24.486624119572763 26.22598459045666 34 25.502645502645503 24.212962962962965 24.669312169312168 25.615079365079364 35 26.17307628715982 24.083198306934296 24.26507059951721 25.47865480638868 36 24.00052908303297 24.995866538804933 24.856982242650705 26.146622135511393 37 26.421957671957674 23.892195767195766 24.69246031746032 24.993386243386244 38 25.30339605171787 23.96084785556033 24.625508415726994 26.110247676994806 39 25.647300023147384 24.61889487781489 24.28160444429748 25.452200654740253 40 26.43761780364406 24.787540094573593 23.874871862702953 24.899970239079394 41 25.379451737707086 24.688337025892 24.790846863529644 25.141364372871266 42 25.8234126984127 25.82010582010582 23.740079365079364 24.616402116402117 43 25.21825396825397 24.417989417989418 25.148809523809522 25.21494708994709 44 25.462120961608413 25.085149300618365 23.55742204292186 25.89530769485136 45 25.191798941798943 25.978835978835978 23.366402116402117 25.462962962962965 46 24.794973544973544 25.145502645502642 24.659391534391535 25.400132275132275 47 24.999173307760987 25.03554776627757 24.324592440726168 25.640686485235275 48 26.02843915343915 25.539021164021165 23.51851851851852 24.914021164021165 49 25.101683145398628 25.181045600343904 24.13279984127509 25.584471412982374 50 26.073873218478226 24.992559769848878 24.24192321682484 24.691643794848055 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.5 6 3.0 7 2.0 8 1.0 9 3.5 10 6.0 11 6.0 12 6.0 13 14.0 14 22.0 15 31.5 16 41.0 17 55.5 18 70.0 19 67.5 20 65.0 21 80.5 22 96.0 23 130.0 24 164.0 25 208.0 26 252.0 27 281.5 28 311.0 29 350.5 30 390.0 31 432.5 32 475.0 33 532.5 34 590.0 35 665.5 36 741.0 37 820.5 38 900.0 39 1019.0 40 1138.0 41 1255.5 42 1373.0 43 1444.5 44 1516.0 45 1562.0 46 1608.0 47 1727.0 48 1846.0 49 1948.5 50 2051.0 51 2033.5 52 2016.0 53 2035.5 54 2055.0 55 2138.5 56 2222.0 57 2212.5 58 2203.0 59 2004.5 60 1806.0 61 1666.5 62 1527.0 63 1329.5 64 1132.0 65 1020.0 66 908.0 67 820.5 68 733.0 69 687.5 70 642.0 71 515.5 72 389.0 73 336.5 74 284.0 75 235.5 76 187.0 77 168.0 78 149.0 79 134.5 80 120.0 81 102.5 82 85.0 83 63.0 84 41.0 85 31.5 86 22.0 87 17.0 88 12.0 89 8.5 90 5.0 91 4.5 92 4.0 93 3.0 94 2.0 95 1.5 96 1.0 97 4.0 98 7.0 99 15.5 100 24.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013227075824212163 2 0.006613537912106082 3 0.0 4 0.0 5 0.0 6 0.003306768956053041 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.003306768956053041 35 0.0 36 0.0 37 0.003306768956053041 38 0.0 39 0.0 40 0.0 41 0.0 42 0.003306768956053041 43 0.003306768956053041 44 0.0 45 0.003306768956053041 46 0.003306768956053041 47 0.0 48 0.003306768956053041 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 30241.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 88.64124863595781 #Duplication Level Percentage of deduplicated Percentage of total 1 95.045885249571 84.24985946231936 2 3.178392897112587 5.634734301114381 3 0.6864134895172722 1.8253364637412783 4 0.32828471237782586 1.1639826725306703 5 0.20890845333134375 0.9258953076948514 6 0.10818473476087442 0.575377798353229 7 0.08953219428486159 0.5555371846169108 8 0.04849660523763337 0.34390397142951623 9 0.02984406476162053 0.2380873648358189 >10 0.2760575990449899 4.487285473363976 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 50 0.16533844780265203 No Hit GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG 47 0.1554181409344929 No Hit GGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCG 44 0.1454978340663338 No Hit TTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGAC 41 0.13557752719817467 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 39 0.1289639892860686 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 38 0.12565722033001553 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 36 0.11904368241790945 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 34 0.11243014450580337 No Hit GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT 33 0.10912337554975034 No Hit CCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATG 33 0.10912337554975034 No Hit AAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGA 33 0.10912337554975034 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 32 0.10581660659369731 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.0 0.0 26 0.0 0.0 0.0 0.0 0.0 27 0.0 0.0 0.0 0.0 0.0 28 0.0 0.0 0.0 0.0 0.0 29 0.0 0.0 0.0 0.0 0.0 30 0.0 0.0 0.0 0.0 0.0 31 0.0 0.0 0.0 0.0 0.0 32 0.0 0.0 0.0 0.0 0.0 33 0.0 0.0 0.0 0.0 0.0 34 0.0 0.0 0.0 0.0 0.0 35 0.0 0.0 0.0 0.0 0.0 36 0.0 0.0 0.0 0.0 0.0 37 0.0 0.0 0.0 0.0 0.0 38 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 40 3.9498627E-7 38.5 1 TAGGAAT 45 3.9412465E-5 29.333334 32 GCTAGGA 45 3.9412465E-5 29.333334 30 AGCTAGG 45 3.9412465E-5 29.333334 29 CTAGGAA 45 3.9412465E-5 29.333334 31 GCAGCTA 45 3.9412465E-5 29.333334 27 CCCCGGA 30 0.0056578955 29.333332 1 TTGGACC 30 0.0056578955 29.333332 30 GCAGGCC 50 8.0802085E-5 26.4 3 AGGAATA 50 8.0802085E-5 26.4 33 AGCAGGC 50 8.0802085E-5 26.4 2 TGGATAC 50 8.0802085E-5 26.4 19 ATCAACG 60 9.348858E-6 25.666666 3 CCGCAGC 45 0.0013669374 24.444445 25 GGATACC 45 0.0013669374 24.444445 20 TACCGCA 45 0.0013669374 24.444445 23 CAGCTAG 55 1.5440467E-4 24.0 28 CGCCTGG 55 1.5440467E-4 24.0 15 CCGCCTG 55 1.5440467E-4 24.0 14 ATAATGG 55 1.5440467E-4 24.0 37 >>END_MODULE