##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062278_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1181668 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.227206795817438 32.0 32.0 32.0 32.0 32.0 2 30.70963333186648 32.0 32.0 32.0 32.0 32.0 3 30.73509733698467 32.0 32.0 32.0 32.0 32.0 4 30.746190131238215 32.0 32.0 32.0 32.0 32.0 5 30.639001817769458 32.0 32.0 32.0 32.0 32.0 6 34.301742959951525 36.0 36.0 36.0 32.0 36.0 7 34.24320282854406 36.0 36.0 36.0 32.0 36.0 8 34.18532616606356 36.0 36.0 36.0 32.0 36.0 9 34.343665902774724 36.0 36.0 36.0 32.0 36.0 10 33.9891729318218 36.0 36.0 36.0 32.0 36.0 11 34.34577224736559 36.0 36.0 36.0 32.0 36.0 12 34.12241255581094 36.0 36.0 36.0 32.0 36.0 13 34.23393626636246 36.0 36.0 36.0 32.0 36.0 14 34.12407799821947 36.0 36.0 36.0 32.0 36.0 15 34.068449852242765 36.0 36.0 36.0 32.0 36.0 16 34.07610428648317 36.0 36.0 36.0 32.0 36.0 17 34.000842876340904 36.0 36.0 36.0 32.0 36.0 18 34.005917059614035 36.0 36.0 36.0 32.0 36.0 19 34.023848492131464 36.0 36.0 36.0 32.0 36.0 20 34.00836021623671 36.0 36.0 36.0 32.0 36.0 21 33.98980085777054 36.0 36.0 36.0 32.0 36.0 22 33.96431654237908 36.0 36.0 36.0 32.0 36.0 23 33.91830023322964 36.0 36.0 36.0 32.0 36.0 24 33.90109489298179 36.0 36.0 36.0 32.0 36.0 25 33.53968288893327 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 13.0 5 111.0 6 250.0 7 54.0 8 221.0 9 155.0 10 73.0 11 26.0 12 62.0 13 54.0 14 212.0 15 298.0 16 418.0 17 569.0 18 789.0 19 1116.0 20 1630.0 21 2459.0 22 3749.0 23 5360.0 24 7676.0 25 10742.0 26 14576.0 27 18860.0 28 24936.0 29 32563.0 30 42605.0 31 58585.0 32 82613.0 33 116051.0 34 248664.0 35 506178.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.964879914696276 17.4166003757426 12.027994516189091 25.590525193372038 2 16.8333379877749 19.1876391572245 37.35248593723951 26.626536917761097 3 19.08406895040117 22.6480352656134 28.366003447689316 29.90189233629611 4 13.148765205880835 15.315526523592654 34.73072694541752 36.80498132510899 5 15.20854479592502 36.04202980384455 33.158406680341365 15.591018719889066 6 35.180301937153445 34.357206488566426 16.312955793338684 14.149535780941443 7 31.00076755333479 29.968382902368234 19.978413621445405 19.052435922851572 8 28.508263608606217 32.81086384107845 18.856514475293896 19.824358075021433 9 26.962459362113332 14.66276802788583 18.558751983705022 39.81602062629582 10 16.894226874363376 26.3706576139736 30.548008819935358 26.187106691727667 11 37.06648813332373 21.399848303156396 21.664088950283265 19.86957461323661 12 24.391624557547058 23.51972638888065 28.304531345201 23.78411770837129 13 29.422262142832935 19.360488763854523 25.041605938379146 26.175643154933397 14 23.691225014064653 19.29407319040486 24.815295560993135 32.199406234537356 15 25.37197324199319 26.857493445237434 21.887229271781557 25.883304040987813 16 25.941735990252617 25.85158284853425 23.207316639185773 24.999364522027363 17 24.23650554640875 26.204673541033085 24.77424154735102 24.78457936520714 18 24.936986092459936 25.19980174447913 25.560474288207608 24.30273787485332 19 25.580585672547564 25.036997379899343 25.04936513597331 24.33305181157978 20 25.78831852769841 24.46390104691242 24.679314775958712 25.06846564943046 21 26.562890442021665 24.25515838763698 24.468024730782947 24.71392643955841 22 26.06563001681626 24.033022564289375 24.84460841829711 25.05673900059725 23 24.79287114221973 24.31017747610247 25.25769353907032 25.639257842607478 24 24.80439052942676 24.713584703961995 25.056986584964015 25.42503818164723 25 25.02519952091264 24.421596878816988 24.971497012480327 25.58170658779005 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 271.0 1 271.0 2 319.0 3 367.0 4 367.0 5 367.0 6 844.5 7 1322.0 8 1322.0 9 1322.0 10 1515.0 11 1708.0 12 1708.0 13 1708.0 14 2331.0 15 2954.0 16 2954.0 17 2954.0 18 4895.5 19 6837.0 20 6837.0 21 6837.0 22 10891.0 23 14945.0 24 14945.0 25 14945.0 26 22256.5 27 29568.0 28 29568.0 29 29568.0 30 37173.0 31 44778.0 32 44778.0 33 44778.0 34 56506.5 35 68235.0 36 68235.0 37 68235.0 38 81482.5 39 94730.0 40 94730.0 41 94730.0 42 109152.0 43 123574.0 44 123574.0 45 123574.0 46 138358.5 47 153143.0 48 153143.0 49 153143.0 50 158511.0 51 163879.0 52 163879.0 53 163879.0 54 153886.5 55 143894.0 56 143894.0 57 143894.0 58 133038.5 59 122183.0 60 122183.0 61 122183.0 62 106973.5 63 91764.0 64 91764.0 65 91764.0 66 74706.5 67 57649.0 68 57649.0 69 57649.0 70 43796.5 71 29944.0 72 29944.0 73 29944.0 74 22524.5 75 15105.0 76 15105.0 77 15105.0 78 11963.5 79 8822.0 80 8822.0 81 8822.0 82 6081.5 83 3341.0 84 3341.0 85 3341.0 86 2414.5 87 1488.0 88 1488.0 89 1488.0 90 1013.0 91 538.0 92 538.0 93 538.0 94 337.0 95 136.0 96 136.0 97 136.0 98 314.5 99 493.0 100 493.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 6.770091091575637E-4 2 8.462613864469547E-5 3 5.923829705128682E-4 4 0.011424528717033887 5 0.03478134298296984 6 0.06431586536996856 7 0.10950622340623593 8 0.11102949390184044 9 0.12076149984598043 10 0.1365865877725385 11 0.14242579133902247 12 0.13531719569286804 13 0.13100126262198858 14 0.11881509865715244 15 0.1362480832179597 16 0.12304640558938722 17 0.12990112281960753 18 0.11619168835916688 19 0.09977421746209594 20 0.0972354333027551 21 0.09435814458883544 22 0.10688281310825037 23 0.08479539092198485 24 0.0953736582525718 25 0.09224249112271805 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1181668.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.796701017635876 #Duplication Level Percentage of deduplicated Percentage of total 1 79.30600155801693 45.8362526095287 2 12.084894478489982 13.969340660059284 3 3.6500240580178844 6.328780475653131 4 1.5778637792068482 3.647812843735009 5 0.849736825383229 2.455599262017478 6 0.51818652777504 1.7969683090308517 7 0.37309150842413336 1.5094420855225887 8 0.2787801059457924 1.2890056346411054 9 0.19565191345370822 1.0177231630871109 >10 1.0430027671579765 10.6566628052482 >50 0.06287803721159375 2.581512660957105 >100 0.054444041663897665 6.459803401139911 >500 0.004855815549811757 1.9521341950529008 >1k 5.885837030074857E-4 0.4989618943267129 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2114 0.1788996570948862 No Hit TATCAACGCAGAGTACTTTTTTTTT 1603 0.13565570024744683 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 8.462613864469547E-5 7 0.0 0.0 0.0 0.0 8.462613864469547E-5 8 0.0 0.0 0.0 0.0 8.462613864469547E-5 9 0.0 0.0 0.0 0.0 8.462613864469547E-5 10 0.0 0.0 0.0 0.0 8.462613864469547E-5 11 0.0 0.0 0.0 0.0 8.462613864469547E-5 12 0.0 0.0 0.0 0.0 2.538784159340864E-4 13 0.0 0.0 0.0 0.0 2.538784159340864E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 465 0.0 14.294413 1 TAGGACA 95 4.8967195E-9 14.0 4 CTACACG 70 7.258999E-6 13.571428 4 GCGTTAT 80 2.0087227E-6 13.056414 1 CCGTCGT 155 0.0 12.87315 9 GTATCAA 1345 0.0 12.707831 1 GTGTAGG 105 2.0045263E-8 12.660766 1 GTCCTAA 60 4.1068436E-4 12.660765 1 CGTTATT 85 3.9522583E-6 12.290993 2 CGTCGTA 155 1.8189894E-12 12.259624 10 CGGACAT 125 1.4078978E-9 12.160516 5 CACGCCC 120 1.0013537E-8 11.873993 16 GGTTTAT 80 2.878688E-5 11.869467 1 TTAGACA 65 8.0209115E-4 11.692307 4 ACGCCCC 125 1.8317223E-8 11.3990345 17 ACTCTAA 160 4.5474735E-11 11.282684 10 GTCGGCG 110 4.9555456E-7 11.228701 12 AGAACCG 110 4.9609844E-7 11.227749 5 AAGACGG 280 0.0 11.196903 5 AACCGCG 85 5.310928E-5 11.178366 7 >>END_MODULE