##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062278_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1181668 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.303323776221408 32.0 32.0 32.0 32.0 32.0 2 31.466609064474962 32.0 32.0 32.0 32.0 32.0 3 31.58144504209304 32.0 32.0 32.0 32.0 32.0 4 31.65752478699601 32.0 32.0 32.0 32.0 32.0 5 31.631911839873805 32.0 32.0 32.0 32.0 32.0 6 35.27768967256454 36.0 36.0 36.0 36.0 36.0 7 35.28041040292197 36.0 36.0 36.0 36.0 36.0 8 35.233805095847565 36.0 36.0 36.0 36.0 36.0 9 35.318812898377544 36.0 36.0 36.0 36.0 36.0 10 35.20114871520596 36.0 36.0 36.0 36.0 36.0 11 35.316849571960994 36.0 36.0 36.0 36.0 36.0 12 35.2385923965107 36.0 36.0 36.0 36.0 36.0 13 35.27301407840442 36.0 36.0 36.0 36.0 36.0 14 35.23928463832481 36.0 36.0 36.0 36.0 36.0 15 35.22047563274964 36.0 36.0 36.0 36.0 36.0 16 35.227409898550185 36.0 36.0 36.0 36.0 36.0 17 35.20967141362887 36.0 36.0 36.0 36.0 36.0 18 35.20529708852233 36.0 36.0 36.0 36.0 36.0 19 35.20328721772952 36.0 36.0 36.0 36.0 36.0 20 35.19793376819885 36.0 36.0 36.0 36.0 36.0 21 35.191558034913356 36.0 36.0 36.0 36.0 36.0 22 35.1737535416039 36.0 36.0 36.0 36.0 36.0 23 35.14157022107732 36.0 36.0 36.0 36.0 36.0 24 35.124736389578125 36.0 36.0 36.0 36.0 36.0 25 35.115986893103646 36.0 36.0 36.0 36.0 36.0 26 35.080254352322314 36.0 36.0 36.0 36.0 36.0 27 35.067709373529624 36.0 36.0 36.0 36.0 36.0 28 35.05176580900896 36.0 36.0 36.0 36.0 36.0 29 35.028330292434084 36.0 36.0 36.0 36.0 36.0 30 35.00158927888375 36.0 36.0 36.0 36.0 36.0 31 35.01036754824536 36.0 36.0 36.0 36.0 36.0 32 34.98538760464022 36.0 36.0 36.0 36.0 36.0 33 34.96215603705948 36.0 36.0 36.0 36.0 36.0 34 34.95284970059272 36.0 36.0 36.0 36.0 36.0 35 34.94217749824824 36.0 36.0 36.0 36.0 36.0 36 34.91499473625418 36.0 36.0 36.0 36.0 36.0 37 34.91479924987391 36.0 36.0 36.0 32.0 36.0 38 34.89497303811223 36.0 36.0 36.0 32.0 36.0 39 34.884167972730076 36.0 36.0 36.0 32.0 36.0 40 34.86077984679284 36.0 36.0 36.0 32.0 36.0 41 34.84048480622307 36.0 36.0 36.0 32.0 36.0 42 34.814625597037406 36.0 36.0 36.0 32.0 36.0 43 34.81021403642986 36.0 36.0 36.0 32.0 36.0 44 34.765039757359936 36.0 36.0 36.0 32.0 36.0 45 34.74848688464103 36.0 36.0 36.0 32.0 36.0 46 34.742246553177374 36.0 36.0 36.0 32.0 36.0 47 34.70450244908045 36.0 36.0 36.0 32.0 36.0 48 34.68103562083428 36.0 36.0 36.0 32.0 36.0 49 34.670616450644346 36.0 36.0 36.0 32.0 36.0 50 34.258633558664535 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 8.0 21 37.0 22 83.0 23 200.0 24 517.0 25 1191.0 26 2581.0 27 5027.0 28 8769.0 29 14237.0 30 21518.0 31 31748.0 32 47841.0 33 81469.0 34 188159.0 35 778279.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.65888861142032 17.894211112192767 12.464499307974588 25.98240096841232 2 16.208263195444147 19.671191882877554 36.971955846347456 27.148589075330843 3 18.47417121250844 23.01877180184587 28.626447744117208 29.88060924152849 4 12.93029254434625 15.79277410641069 34.8478886183671 36.42904473087596 5 14.950053652971901 36.39787148336081 32.916267513379395 15.735807350287898 6 35.31403966941589 34.55646519405653 16.21676514345001 13.91272999307757 7 31.157905604619913 30.066397668380628 19.842629232576325 18.933067494423135 8 28.5919564547741 33.03085130510431 18.689598093542347 19.687594146579244 9 27.11049127166006 14.39152113791691 18.551488235274206 39.94649935514882 10 16.884621471192816 26.470655438461087 30.55395470974479 26.090768380601304 11 37.23533175138872 21.241076173679918 21.66471462373526 19.858877451196104 12 24.464655046933657 23.481976324991454 28.328176780618584 23.725191847456305 13 29.456835591722886 19.277834383261627 25.11712257588426 26.148207449131228 14 23.698873118337808 19.112221029933956 24.870098877180393 32.31880697454784 15 25.353144876564315 26.939461845459128 21.862485909747917 25.844907368228636 16 26.037140908313884 25.704981627572014 23.264012890318888 24.993864573795214 17 24.346263078969727 26.095316112478294 24.723441778909137 24.834979029642845 18 25.165973154873583 25.001798306968038 25.59071210417148 24.241516433986902 19 25.767897582061966 24.8460650538053 25.16722124996192 24.218816114170817 20 26.052285501994643 24.24856093007669 24.721960350894413 24.977193217034255 21 26.696838705964787 24.12174993314535 24.592440516287148 24.588970844602713 22 26.214385089551378 23.88234258691951 24.912665824918676 24.990606498610436 23 24.831763236374346 24.0642887850056 25.400197009650764 25.703750968969285 24 25.0 24.57441082683962 25.218930043938336 25.206659129222043 25 25.269724888653062 24.164845087490807 25.152179082601105 25.413250941255022 26 25.01277859019146 25.015655888645167 25.298985159910092 24.67258036125328 27 25.365544461952744 24.603566840602472 24.831296936010467 25.19959176143432 28 25.12273123868634 24.36201335931966 25.424005646356314 25.091249755637683 29 24.932404585740606 24.717961043038496 25.299091196051666 25.05054317516923 30 24.934942719974 24.835251694451237 25.333368312640538 24.896437272934225 31 25.523353183955777 24.427520968401208 24.707212486851112 25.3419133607919 32 25.34669536083652 24.513374016317762 24.585899292265015 25.554031330580703 33 24.807665780630245 24.401206092748634 25.08667839585941 25.704449730761713 34 25.57844326174214 24.42532261736214 25.168174005617505 24.828060115278213 35 25.873238185103226 24.35918809476459 25.162122936703717 24.605450783428466 36 24.911692474861763 24.867856060849682 24.869040828795956 25.3514106354926 37 25.79968417150875 24.55896565322844 24.7928750717215 24.848475103541308 38 25.171135353699476 24.349668730699936 25.148878660400943 25.330317255199645 39 25.648346942730516 24.38757712673453 24.66650700413571 25.29756892639924 40 25.80403294326325 24.489281253279263 24.896502232437538 24.810183571019948 41 24.901620948264043 24.950789317346704 25.21347196387437 24.934117770514888 42 25.906533165992023 24.794582339285913 24.716130522834387 24.582753971887676 43 25.550641406473474 24.056339506204182 25.019591713762946 25.373427373559394 44 25.106485254553284 24.67030404893625 24.844471864450384 25.378738832060083 45 25.26501078999704 24.893073245038718 24.74565226589938 25.09626369906487 46 25.14562326248577 24.580986675355117 24.906803650842683 25.366586411316426 47 25.27522745563652 24.613192130724684 25.06772258324948 25.04385783038931 48 25.870587398951944 25.0538245927611 24.23020676768087 24.845381240606084 49 25.257949202287016 25.189230451546514 24.40353478421297 25.149285561953512 50 25.35245237799042 25.22009496897979 24.42265004244069 25.0048026105891 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 111.0 1 81.5 2 52.0 3 132.0 4 212.0 5 216.0 6 220.0 7 190.0 8 160.0 9 208.0 10 256.0 11 408.0 12 560.0 13 1084.0 14 1608.0 15 1998.5 16 2389.0 17 2342.5 18 2296.0 19 2130.5 20 1965.0 21 2260.5 22 2556.0 23 3188.0 24 3820.0 25 4869.0 26 5918.0 27 7456.0 28 8994.0 29 10729.5 30 12465.0 31 14367.0 32 16269.0 33 18832.0 34 21395.0 35 25339.5 36 29284.0 37 34798.5 38 40313.0 39 44802.0 40 49291.0 41 54295.0 42 59299.0 43 62217.5 44 65136.0 45 71219.5 46 77303.0 47 82287.5 48 87272.0 49 90752.5 50 94233.0 51 92982.5 52 91732.0 53 91140.5 54 90549.0 55 90035.0 56 89521.0 57 86605.5 58 83690.0 59 76736.5 60 69783.0 61 61100.0 62 52417.0 63 45513.0 64 38609.0 65 32418.5 66 26228.0 67 22568.5 68 18909.0 69 16454.5 70 14000.0 71 11051.5 72 8103.0 73 7090.5 74 6078.0 75 4555.5 76 3033.0 77 2625.5 78 2218.0 79 1854.5 80 1491.0 81 1174.0 82 857.0 83 714.5 84 572.0 85 435.0 86 298.0 87 199.5 88 101.0 89 72.0 90 43.0 91 28.5 92 14.0 93 15.0 94 16.0 95 12.0 96 8.0 97 11.5 98 15.0 99 10.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0298730269415775 2 0.0056699512891945966 3 1.6925227728939094E-4 4 8.462613864469547E-5 5 0.0 6 1.6925227728939094E-4 7 0.0 8 0.0 9 0.0 10 8.462613864469547E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.077568318681728E-4 17 0.0 18 8.462613864469547E-5 19 0.0 20 1.6925227728939094E-4 21 0.0 22 0.0 23 0.0 24 0.0010155136637363456 25 8.462613864469547E-5 26 3.385045545787819E-4 27 5.077568318681728E-4 28 0.0017771489115386047 29 4.2313069322347734E-4 30 0.001438644356959823 31 7.616352478022592E-4 32 9.3088752509165E-4 33 8.462613864469547E-5 34 4.2313069322347734E-4 35 2.538784159340864E-4 36 1.6925227728939094E-4 37 0.0011847659410257365 38 8.462613864469547E-5 39 7.616352478022592E-4 40 0.0 41 0.0011847659410257365 42 0.004315933070879468 43 0.0038928023776559914 44 0.004146680793590078 45 0.0015232704956045183 46 0.0019464011888279957 47 7.616352478022592E-4 48 0.004400559209524164 49 0.0033850455457878187 50 0.0016078966342492138 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1181668.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.95570964438163 #Duplication Level Percentage of deduplicated Percentage of total 1 78.79486848092469 46.45407387628634 2 12.672717023289213 14.942580504609019 3 3.674504430854967 6.498990489374375 4 1.5441491629410287 3.641456387918649 5 0.850069508326484 2.5058225555219216 6 0.533118590052655 1.885823088069987 7 0.3657270723199805 1.509318935935057 8 0.26815190404704653 1.2647268636468605 9 0.20784562656004824 1.10283177692959 >10 0.9777959137315675 10.111813471818772 >50 0.05894706886198112 2.424344720951525 >100 0.04763081306813798 5.740621688652911 >500 0.004041398084474843 1.6531231641365982 >1k 4.330069376223045E-4 0.26447247614848135 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 8.462613864469547E-5 7 0.0 0.0 0.0 0.0 8.462613864469547E-5 8 0.0 0.0 0.0 0.0 1.6925227728939094E-4 9 0.0 0.0 0.0 0.0 1.6925227728939094E-4 10 0.0 0.0 0.0 0.0 1.6925227728939094E-4 11 0.0 0.0 0.0 0.0 1.6925227728939094E-4 12 0.0 0.0 0.0 0.0 3.385045545787819E-4 13 0.0 0.0 0.0 0.0 3.385045545787819E-4 14 0.0 0.0 0.0 0.0 3.385045545787819E-4 15 0.0 0.0 0.0 0.0 4.2313069322347734E-4 16 0.0 0.0 0.0 0.0 4.2313069322347734E-4 17 0.0 0.0 0.0 0.0 4.2313069322347734E-4 18 0.0 0.0 0.0 0.0 5.077568318681728E-4 19 0.0 0.0 0.0 0.0 5.077568318681728E-4 20 0.0 0.0 0.0 0.0 5.923829705128682E-4 21 0.0 0.0 0.0 0.0 7.616352478022592E-4 22 0.0 0.0 0.0 8.462613864469547E-5 7.616352478022592E-4 23 0.0 0.0 0.0 8.462613864469547E-5 8.462613864469547E-4 24 0.0 0.0 0.0 3.385045545787819E-4 8.462613864469547E-4 25 0.0 0.0 0.0 5.923829705128682E-4 9.308875250916501E-4 26 0.0 0.0 0.0 7.616352478022592E-4 0.0010155136637363456 27 0.0 0.0 0.0 7.616352478022592E-4 0.0010155136637363456 28 0.0 0.0 0.0 0.0014386443569598228 0.0010155136637363456 29 0.0 0.0 0.0 0.0021156534661173868 0.0010155136637363456 30 0.0 0.0 0.0 0.004485185348168859 0.0010155136637363456 31 0.0 0.0 0.0 0.007700978616667287 0.0011001398023810411 32 0.0 0.0 0.0 0.012440042380770233 0.0011001398023810411 33 0.0 0.0 0.0 0.014894200401466402 0.0011847659410257365 34 0.0 0.0 0.0 0.018533124363188307 0.0014386443569598228 35 0.0 0.0 0.0 0.023356814265935947 0.0014386443569598228 36 0.0 0.0 0.0 0.03038078377344567 0.0014386443569598228 37 0.0 0.0 0.0 0.04036666813351974 0.0014386443569598228 38 0.0 0.0 0.0 0.05559937308956492 0.0014386443569598228 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 635 0.0 31.19103 1 GTATCAA 1520 0.0 25.047447 1 GTGTATA 200 0.0 18.705956 1 GTTATAT 95 1.592686E-5 18.532215 1 TATACAG 185 2.1827873E-11 17.837477 5 CGAATGC 250 0.0 17.60039 43 CGCAATA 265 0.0 17.43435 36 TACGAAT 240 0.0 17.417051 41 CTAGCGG 255 0.0 17.254555 29 ACCATAC 425 0.0 17.087791 1 GCATTCG 440 0.0 16.999657 22 TCAACGC 2220 0.0 16.945602 4 CAATACG 260 0.0 16.923452 38 CAACGCA 2245 0.0 16.7569 5 ATTCGTA 460 0.0 16.738792 24 ATCAACG 2325 0.0 16.369562 3 TCTAGCG 270 0.0 16.295969 28 AACGCAG 2325 0.0 16.27494 6 CCTATTC 300 0.0 16.133007 3 ATACGAA 260 0.0 16.077278 40 >>END_MODULE