##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062277_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1257111 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.251978544456296 32.0 32.0 32.0 32.0 32.0 2 30.916265150810073 32.0 32.0 32.0 32.0 32.0 3 30.829583863318355 32.0 32.0 32.0 32.0 32.0 4 30.94573669310029 32.0 32.0 32.0 32.0 32.0 5 30.860793517835734 32.0 32.0 32.0 32.0 32.0 6 34.4197982517057 36.0 36.0 36.0 32.0 36.0 7 34.18733747457464 36.0 36.0 36.0 32.0 36.0 8 34.102831810397014 36.0 36.0 36.0 32.0 36.0 9 34.474549980073355 36.0 36.0 36.0 32.0 36.0 10 34.03640410433128 36.0 36.0 36.0 32.0 36.0 11 34.18675280066756 36.0 36.0 36.0 32.0 36.0 12 34.133277013724324 36.0 36.0 36.0 32.0 36.0 13 34.162354000561606 36.0 36.0 36.0 32.0 36.0 14 34.12357142686684 36.0 36.0 36.0 32.0 36.0 15 34.27244929047634 36.0 36.0 36.0 32.0 36.0 16 34.27235701541073 36.0 36.0 36.0 32.0 36.0 17 34.04971716896917 36.0 36.0 36.0 32.0 36.0 18 34.21827905411694 36.0 36.0 36.0 32.0 36.0 19 34.213892806601805 36.0 36.0 36.0 32.0 36.0 20 34.026337371958405 36.0 36.0 36.0 32.0 36.0 21 33.97165723631406 36.0 36.0 36.0 32.0 36.0 22 34.12570170812283 36.0 36.0 36.0 32.0 36.0 23 33.947021384746456 36.0 36.0 36.0 32.0 36.0 24 33.91622139970138 36.0 36.0 36.0 32.0 36.0 25 33.612810642815155 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 16.0 5 84.0 6 241.0 7 56.0 8 218.0 9 178.0 10 92.0 11 25.0 12 47.0 13 42.0 14 185.0 15 359.0 16 612.0 17 818.0 18 1116.0 19 1343.0 20 1841.0 21 2450.0 22 3419.0 23 4704.0 24 6514.0 25 9022.0 26 12914.0 27 16724.0 28 23095.0 29 31522.0 30 42799.0 31 61286.0 32 92167.0 33 138047.0 34 310594.0 35 494579.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.82395167282105 17.750803835500495 11.5643330909762 25.860911400702253 2 16.69993087302831 19.486964912294656 37.631959729760474 26.181144484916558 3 19.300407365188054 22.868690950542636 28.303488258320918 29.52741342594839 4 12.550407596481472 15.433694271214945 35.80659712029327 36.209301012010314 5 14.784164847782685 36.45926747580812 33.54112242713788 15.215445249271319 6 34.66475962613728 35.412771600059536 16.42864476753765 13.493824006265537 7 30.489141080747935 30.20048828109448 20.3427363807637 18.967634257393893 8 27.77276553117383 33.50801433015903 19.24339053664837 19.47582960201877 9 26.583986168417518 14.526028588562188 18.926125110199518 39.963860132820784 10 16.074271782409674 26.70528085690368 31.036474001929115 26.183973358757527 11 37.5196748786052 21.383088207180453 21.846045269744977 19.25119164446937 12 24.06722555208188 23.890718652302915 28.697743881797727 23.344311913817478 13 28.870663797236872 19.473546713987833 25.380674677069674 26.27511481170562 14 22.966136046718127 20.178529761463913 24.83736176048279 32.01797243133517 15 24.83370994681745 27.770817220727896 22.01161780249417 25.383855029960483 16 25.491578067136544 26.240672161828538 23.809580695257438 24.458169075777487 17 23.571515041462384 26.576462492712622 25.33298927361986 24.519033192205136 18 24.5794760920721 25.331135452377257 26.254086187194158 23.835302268356486 19 25.215356453846162 25.318784879226016 25.166946536501317 24.29891213042651 20 25.360712619408176 24.842792833678082 24.911424171925482 24.885070374988256 21 26.328758965082354 24.74649358590555 24.380246882125885 24.544500566886203 22 25.450772548182737 24.791853128254786 25.391131382560257 24.366242941002227 23 23.87199549084795 24.80240615486517 25.66323703618786 25.662361318099023 24 24.2370247228512 25.387021060442482 25.589090480603566 24.786863736102752 25 24.298339198420408 24.89705577936657 25.495613127179507 25.308991895033518 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 136.0 1 136.0 2 235.5 3 335.0 4 335.0 5 335.0 6 764.5 7 1194.0 8 1194.0 9 1194.0 10 1566.5 11 1939.0 12 1939.0 13 1939.0 14 2730.5 15 3522.0 16 3522.0 17 3522.0 18 5992.5 19 8463.0 20 8463.0 21 8463.0 22 13736.0 23 19009.0 24 19009.0 25 19009.0 26 28825.5 27 38642.0 28 38642.0 29 38642.0 30 48457.0 31 58272.0 32 58272.0 33 58272.0 34 71429.5 35 84587.0 36 84587.0 37 84587.0 38 95379.5 39 106172.0 40 106172.0 41 106172.0 42 119779.5 43 133387.0 44 133387.0 45 133387.0 46 146707.5 47 160028.0 48 160028.0 49 160028.0 50 162175.5 51 164323.0 52 164323.0 53 164323.0 54 152117.5 55 139912.0 56 139912.0 57 139912.0 58 129135.5 59 118359.0 60 118359.0 61 118359.0 62 105575.5 63 92792.0 64 92792.0 65 92792.0 66 76556.5 67 60321.0 68 60321.0 69 60321.0 70 45568.5 71 30816.0 72 30816.0 73 30816.0 74 23692.0 75 16568.0 76 16568.0 77 16568.0 78 13780.0 79 10992.0 80 10992.0 81 10992.0 82 7532.5 83 4073.0 84 4073.0 85 4073.0 86 3072.0 87 2071.0 88 2071.0 89 2071.0 90 1320.0 91 569.0 92 569.0 93 569.0 94 346.5 95 124.0 96 124.0 97 124.0 98 314.5 99 505.0 100 505.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0010341171145586984 2 3.1818988140267646E-4 3 6.363797628053529E-4 4 0.008591126797872264 5 0.030864418496059615 6 0.056796893830377754 7 0.10158211963780446 8 0.10325261651516851 9 0.1140710724828595 10 0.12838961714597996 11 0.1354693420071895 12 0.13013966149369466 13 0.1254463607430052 14 0.11216193319444345 15 0.12918509184948662 16 0.11621885418232757 17 0.1205144175812637 18 0.10786636979550732 19 0.09307054031028286 20 0.08949090414450275 21 0.08964999908520409 22 0.10078664493429776 23 0.07946792288031845 24 0.08805904967819071 25 0.08678629015258 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1257111.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.41525469332107 #Duplication Level Percentage of deduplicated Percentage of total 1 76.41288602701236 39.28787996930555 2 13.901511143893197 14.294994721706198 3 4.49221841980596 6.929056625770552 4 1.816740100031567 3.736326198187704 5 0.9364998363852505 2.407518880400058 6 0.5318103632889171 1.6405899166228362 7 0.34997624313567666 1.2595882374202731 8 0.23537986213571857 0.9681692449109415 9 0.17480446649008385 0.8088854549505994 >10 0.9552653149234533 9.12411591852487 >50 0.09128953562421609 3.271330100419668 >100 0.08719039062902796 9.748585585325467 >500 0.01054972227771645 3.7504921204284245 >1k 0.003878574366807518 2.772467026026857 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGC 2149 0.1709475137835879 No Hit GGGTAGGCACACGCTGAGCCAGTCA 1766 0.14048083263928166 No Hit GAATAGGACCGCGGTTCTATTTTGT 1696 0.1349125097147348 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1635 0.130060114023344 No Hit TCGTAGTTCCGACCATAAACGATGC 1611 0.12815097473492792 No Hit GAACTACGACGGTATCTGATCGTCT 1600 0.12727595256107058 No Hit GAATAACGCCGCCGCATCGCCAGTC 1565 0.12449179109879716 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1551 0.12337812651388778 No Hit ATCAGATACCGTCGTAGTTCCGACC 1546 0.12298038916213445 No Hit GTATCAACGCAGAGTACTTTTTTTT 1542 0.12266219928073177 No Hit GTATCTGATCGTCTTCGAACCTCCG 1483 0.1179688985300423 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1461 0.11621885418232757 No Hit CTCCTGGTGGTGCCCTTCCGTCAAT 1365 0.10858229702866333 No Hit ACCATACTCCCCCCGGAACCCAAAG 1359 0.10810501220655931 No Hit GTGTAGCGCGCGTGCAGCCCCGGAC 1346 0.10707089509200063 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 7.954747035066911E-5 0.0 0.0 0.0 8 0.0 7.954747035066911E-5 0.0 0.0 0.0 9 0.0 7.954747035066911E-5 0.0 7.954747035066911E-5 0.0 10 0.0 7.954747035066911E-5 0.0 7.954747035066911E-5 0.0 11 0.0 7.954747035066911E-5 0.0 7.954747035066911E-5 0.0 12 0.0 7.954747035066911E-5 0.0 7.954747035066911E-5 2.3864241105200733E-4 13 0.0 7.954747035066911E-5 0.0 7.954747035066911E-5 3.1818988140267646E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGACG 40 0.0052762283 14.250865 13 TCGACGC 40 0.005277623 14.2502985 14 ATCGCCA 220 0.0 14.249164 16 GGTATCA 440 0.0 14.029356 1 TCGCCAG 210 0.0 14.02187 17 CGCATCG 215 0.0 13.698507 13 CGTTATT 125 7.2759576E-12 13.677564 2 CGCGTAA 190 0.0 13.501896 10 GCGTAAC 190 0.0 13.501896 11 TCGCGTA 190 0.0 13.500821 9 CACGCGC 50 0.0014976813 13.301869 12 CAAGACG 400 0.0 12.82527 4 CAGAACG 60 4.0903297E-4 12.666932 4 CGTTCCA 60 4.093079E-4 12.665924 18 GTAATAC 75 1.4801521E-5 12.664914 3 GCGTTAT 135 2.7284841E-11 12.662394 1 CGGACCA 400 0.0 12.588265 9 CGACCAT 265 0.0 12.548932 10 CGCCAGT 235 0.0 12.531178 18 GTATCAA 1155 0.0 12.497947 1 >>END_MODULE