##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062277_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1257111 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.140266054469336 32.0 32.0 32.0 32.0 32.0 2 31.207229910485232 32.0 32.0 32.0 32.0 32.0 3 31.434461236915435 32.0 32.0 32.0 32.0 32.0 4 31.545643145275157 32.0 32.0 32.0 32.0 32.0 5 31.47731107276923 32.0 32.0 32.0 32.0 32.0 6 35.1095201617041 36.0 36.0 36.0 36.0 36.0 7 35.1156222481547 36.0 36.0 36.0 36.0 36.0 8 35.043774972933974 36.0 36.0 36.0 36.0 36.0 9 35.1786850962246 36.0 36.0 36.0 36.0 36.0 10 35.00443636242146 36.0 36.0 36.0 36.0 36.0 11 35.1846288832092 36.0 36.0 36.0 36.0 36.0 12 35.06851344073833 36.0 36.0 36.0 36.0 36.0 13 35.13146333140033 36.0 36.0 36.0 36.0 36.0 14 35.08691356610514 36.0 36.0 36.0 36.0 36.0 15 35.042814039492136 36.0 36.0 36.0 36.0 36.0 16 35.06613178947603 36.0 36.0 36.0 36.0 36.0 17 35.0391524694319 36.0 36.0 36.0 36.0 36.0 18 35.0350024779037 36.0 36.0 36.0 36.0 36.0 19 35.03637228534314 36.0 36.0 36.0 36.0 36.0 20 35.038852575468674 36.0 36.0 36.0 36.0 36.0 21 35.03020417449215 36.0 36.0 36.0 36.0 36.0 22 35.007348595310994 36.0 36.0 36.0 36.0 36.0 23 34.96163425504987 36.0 36.0 36.0 32.0 36.0 24 34.94485053428058 36.0 36.0 36.0 32.0 36.0 25 34.92428989961905 36.0 36.0 36.0 32.0 36.0 26 34.877924065575755 36.0 36.0 36.0 32.0 36.0 27 34.87042751196991 36.0 36.0 36.0 32.0 36.0 28 34.83471467515597 36.0 36.0 36.0 32.0 36.0 29 34.810148825362276 36.0 36.0 36.0 32.0 36.0 30 34.80270636403627 36.0 36.0 36.0 32.0 36.0 31 34.79786430951602 36.0 36.0 36.0 32.0 36.0 32 34.76899016872814 36.0 36.0 36.0 32.0 36.0 33 34.74357713837521 36.0 36.0 36.0 32.0 36.0 34 34.739326917034376 36.0 36.0 36.0 32.0 36.0 35 34.72423119358593 36.0 36.0 36.0 32.0 36.0 36 34.681644659858996 36.0 36.0 36.0 32.0 36.0 37 34.6751360858349 36.0 36.0 36.0 32.0 36.0 38 34.653892933877756 36.0 36.0 36.0 32.0 36.0 39 34.63272773844155 36.0 36.0 36.0 32.0 36.0 40 34.62049970129925 36.0 36.0 36.0 32.0 36.0 41 34.581425983863 36.0 36.0 36.0 32.0 36.0 42 34.55049792739066 36.0 36.0 36.0 32.0 36.0 43 34.55747662696452 36.0 36.0 36.0 32.0 36.0 44 34.483925444928886 36.0 36.0 36.0 32.0 36.0 45 34.483055991077954 36.0 36.0 36.0 32.0 36.0 46 34.456602479812844 36.0 36.0 36.0 32.0 36.0 47 34.44137948041183 36.0 36.0 36.0 32.0 36.0 48 34.41597042743242 36.0 36.0 36.0 32.0 36.0 49 34.39733404607867 36.0 36.0 36.0 32.0 36.0 50 33.92475366137119 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 5.0 21 24.0 22 59.0 23 210.0 24 600.0 25 1307.0 26 2936.0 27 5711.0 28 10358.0 29 17124.0 30 26879.0 31 41482.0 32 66527.0 33 116989.0 34 261065.0 35 705831.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.7172429597189 17.837978051637215 11.797483704231809 25.64729528441208 2 16.206940990601836 19.97949173225653 37.56568930213022 26.247877975011413 3 18.908016580927477 23.282027703290172 28.644101098792706 29.165854616989645 4 12.470179642052292 15.937892517049013 35.97613894079361 35.61578890010508 5 14.737612460325666 36.687004319431075 33.11730874784227 15.458074472400984 6 34.82652246266829 35.69613748381205 16.292156282515105 13.18518377100456 7 30.737222090968896 30.129956702311887 20.1449991289552 18.987822077764015 8 28.073018213984284 33.50443994205762 19.02258432230726 19.399957521650833 9 26.827225280822457 14.346386277743175 18.757452603628476 40.06893583780589 10 16.198967314739907 26.642436507197854 30.93259067815014 26.226005499912098 11 37.91868816675695 21.214912605171698 21.604456567478923 19.26194266059242 12 24.29411563497575 23.71150996212745 28.77232002583702 23.22205437705978 13 29.139192959094306 19.261783565651722 25.269844906297056 26.32917856895692 14 23.334057215313525 19.93841434845451 24.857152630117785 31.870375806114176 15 25.07654455334493 27.522231529276254 21.933703547260343 25.467520370118468 16 25.76266683212659 26.09462080244881 23.736419160895455 24.40629320452915 17 23.92215166361602 26.509114946890133 25.04878248619255 24.5199509033013 18 24.8822896307486 25.211059325707915 26.19760705299691 23.70904399054658 19 25.538158523789868 25.136602893459685 25.150444153300704 24.174794429449747 20 25.62586259699866 24.667629195651912 24.790848815333643 24.915659392015783 21 26.650492001495497 24.522197739259095 24.419263230743532 24.40804702850188 22 25.69367382832542 24.765513944273813 25.193320239819712 24.347491987581048 23 24.170021581228706 24.683261859931225 25.66734361563935 25.47937294320072 24 24.576883302839867 25.243656033728424 25.36838755866677 24.811073104764937 25 24.721683288110597 24.781025700992195 25.32735772736059 25.169933283536615 26 24.204523398148766 26.047960875278815 25.82729566592528 23.920220060647136 27 25.116398206357932 24.91331286835568 25.321313141999845 24.648975783286545 28 24.314793616752166 25.102954968685935 25.749043634451592 24.8332077801103 29 24.22600126639875 25.238404337574817 25.685780378455945 24.849814017570488 30 24.145276878664674 25.5507305288429 25.926356074243717 24.377636518248703 31 25.06226588147885 25.216429124284367 24.893386333245566 24.82791866099121 32 24.958694778876865 25.06656166350464 24.672561162353183 25.30218239526531 33 24.306783018192522 24.85247909888554 25.522189784505734 25.318548098416212 34 25.14459856447493 25.226453562601574 25.63016018601528 23.998787686908212 35 25.74365248435693 24.612403409099947 25.648751974773802 23.99519213176932 36 23.976161138232467 25.651515742096738 25.310176460714963 25.062146658955843 37 25.280170425076285 25.37069681455295 25.12019804437543 24.22893471599533 38 24.646272286218164 24.884437412448065 25.55207933110123 24.917210970232542 39 25.413151646043886 24.79856495678563 24.830543192493863 24.957740204676618 40 25.648968149988345 25.217184480924914 25.28973177388473 23.844115595202016 41 24.190457553462377 25.62304162202022 25.990633991435836 24.195866833081563 42 25.77729234019805 25.63123679454217 25.114951123895835 23.476519741363948 43 25.006582794048036 24.60803538400958 25.570754097839014 24.81462772410337 44 24.372149115480017 25.472886865128803 25.066862042247585 25.0881019771436 45 24.571072192241118 25.764465176662256 25.24055595153243 24.4239066795642 46 24.400321377148813 25.222537765792424 25.109101178117715 25.268039678941044 47 24.776668878102175 25.023108705578384 25.65845889991425 24.541763516405194 48 25.68303402740489 25.53610564206591 24.408169759163137 24.372690571366068 49 24.621937113882645 25.817180641271026 24.81564213812163 24.745240106724705 50 25.041424938329943 25.74924846451297 24.618067239257556 24.591259357899535 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 34.0 1 25.5 2 17.0 3 58.0 4 99.0 5 116.0 6 133.0 7 109.0 8 85.0 9 124.5 10 164.0 11 254.0 12 344.0 13 626.0 14 908.0 15 1215.0 16 1522.0 17 1684.5 18 1847.0 19 2012.5 20 2178.0 21 2865.5 22 3553.0 23 4356.0 24 5159.0 25 6813.5 26 8468.0 27 11174.0 28 13880.0 29 16270.5 30 18661.0 31 21152.0 32 23643.0 33 26892.5 34 30142.0 35 34409.0 36 38676.0 37 45183.5 38 51691.0 39 55754.0 40 59817.0 41 63708.5 42 67600.0 43 69483.5 44 71367.0 45 76541.5 46 81716.0 47 86789.0 48 91862.0 49 94187.0 50 96512.0 51 91349.0 52 86186.0 53 85246.5 54 84307.0 55 85791.5 56 87276.0 57 84721.5 58 82167.0 59 75356.0 60 68545.0 61 60053.5 62 51562.0 63 44173.5 64 36785.0 65 31536.5 66 26288.0 67 23188.0 68 20088.0 69 18427.5 70 16767.0 71 13099.5 72 9432.0 73 8323.0 74 7214.0 75 5204.5 76 3195.0 77 2840.5 78 2486.0 79 2264.5 80 2043.0 81 1592.5 82 1142.0 83 964.5 84 787.0 85 614.5 86 442.0 87 309.0 88 176.0 89 111.5 90 47.0 91 38.5 92 30.0 93 27.0 94 24.0 95 20.0 96 16.0 97 17.5 98 19.0 99 14.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02728478233027951 2 0.004534205809988139 3 3.1818988140267646E-4 4 0.0 5 7.954747035066911E-5 6 2.3864241105200733E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.159272331560219E-4 17 0.0 18 0.0 19 0.0 20 4.7728482210401466E-4 21 7.954747035066911E-5 22 0.0 23 0.0 24 8.750221738573603E-4 25 0.0 26 2.3864241105200733E-4 27 3.1818988140267646E-4 28 6.363797628053529E-4 29 2.3864241105200733E-4 30 6.363797628053529E-4 31 1.5909494070133823E-4 32 4.7728482210401466E-4 33 7.954747035066911E-5 34 7.954747035066912E-4 35 3.977373517533456E-4 36 3.1818988140267646E-4 37 0.0015114019366627132 38 0.0 39 4.7728482210401466E-4 40 0.0 41 9.545696442080293E-4 42 0.004375110869286801 43 0.0036591836361307794 44 0.00357963616578011 45 0.0018295918180653897 46 0.0016704968773640512 47 7.159272331560219E-4 48 0.0028637089326240877 49 0.00357963616578011 50 0.0014318544663120439 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1257111.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.156835066696196 #Duplication Level Percentage of deduplicated Percentage of total 1 75.97403302740538 40.385391429895165 2 14.423545249587958 15.33420031818753 3 4.513148321241424 7.1971404283130145 4 1.8720935851108247 3.9805827973262433 5 0.9281638330919136 2.4669125895269692 6 0.5166764756291574 1.6478931718716598 7 0.32394933368187984 1.2054084910345673 8 0.23311089679266148 0.9913149994445716 9 0.17246567828129314 0.8250956653558128 >10 0.8742106578953317 8.499594689477643 >50 0.07764758155463407 2.870351579175876 >100 0.07787583832983482 8.630332310963245 >500 0.009922395543080007 3.5615198676571556 >1k 0.0031571258546163657 2.404261661770532 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2161 0.17190208342779595 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1807 0.1437422789236591 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1755 0.13960581046542428 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1720 0.13682164900315086 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1637 0.13021920896404535 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1611 0.12815097473492792 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1590 0.1264804778575639 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1572 0.12504862339125186 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1517 0.12067351252196504 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1487 0.11828708841144497 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 1469 0.11685523394513292 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1418 0.1127983129572488 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAT 1299 0.10333216398551918 No Hit ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG 1264 0.10054800252324576 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.954747035066911E-5 2 0.0 0.0 0.0 0.0 7.954747035066911E-5 3 0.0 0.0 0.0 0.0 7.954747035066911E-5 4 0.0 0.0 0.0 0.0 7.954747035066911E-5 5 0.0 0.0 0.0 0.0 7.954747035066911E-5 6 0.0 0.0 0.0 0.0 1.5909494070133823E-4 7 0.0 0.0 0.0 0.0 1.5909494070133823E-4 8 0.0 0.0 0.0 0.0 1.5909494070133823E-4 9 0.0 0.0 0.0 1.5909494070133823E-4 1.5909494070133823E-4 10 0.0 0.0 0.0 1.5909494070133823E-4 1.5909494070133823E-4 11 0.0 0.0 0.0 1.5909494070133823E-4 1.5909494070133823E-4 12 0.0 0.0 0.0 1.5909494070133823E-4 2.3864241105200733E-4 13 0.0 0.0 0.0 1.5909494070133823E-4 2.3864241105200733E-4 14 0.0 0.0 0.0 1.5909494070133823E-4 2.3864241105200733E-4 15 0.0 0.0 0.0 1.5909494070133823E-4 3.1818988140267646E-4 16 0.0 0.0 0.0 1.5909494070133823E-4 3.1818988140267646E-4 17 0.0 0.0 0.0 1.5909494070133823E-4 3.1818988140267646E-4 18 0.0 0.0 0.0 2.3864241105200733E-4 3.977373517533456E-4 19 0.0 0.0 0.0 2.3864241105200733E-4 3.977373517533456E-4 20 0.0 0.0 0.0 3.1818988140267646E-4 4.7728482210401466E-4 21 0.0 0.0 0.0 3.1818988140267646E-4 5.568322924546838E-4 22 0.0 0.0 0.0 3.1818988140267646E-4 5.568322924546838E-4 23 0.0 0.0 0.0 3.977373517533456E-4 5.568322924546838E-4 24 0.0 0.0 0.0 3.977373517533456E-4 5.568322924546838E-4 25 0.0 0.0 0.0 3.977373517533456E-4 5.568322924546838E-4 26 0.0 0.0 0.0 4.7728482210401466E-4 7.15927233156022E-4 27 0.0 0.0 0.0 4.7728482210401466E-4 7.15927233156022E-4 28 0.0 0.0 0.0 7.15927233156022E-4 7.15927233156022E-4 29 0.0 0.0 0.0 0.0011136645849093676 7.15927233156022E-4 30 0.0 0.0 0.0 0.002068234229117397 7.15927233156022E-4 31 0.0 0.0 0.0 0.004295563398936132 7.15927233156022E-4 32 0.0 0.0 0.0 0.007557009683313565 7.15927233156022E-4 33 0.0 0.0 0.0 0.010898003438041669 7.15927233156022E-4 34 0.0 0.0 0.0 0.013841259841016426 7.15927233156022E-4 35 0.0 0.0 0.0 0.01686406371434185 7.15927233156022E-4 36 0.0 0.0 0.0 0.02243238663888869 7.15927233156022E-4 37 0.0 0.0 0.0 0.03126215584781296 7.15927233156022E-4 38 0.0 0.0 0.0 0.04295563398936132 7.15927233156022E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 580 0.0 28.456404 1 GTATCAA 1410 0.0 25.439892 1 GGCGTTA 480 0.0 20.167616 42 TGCGTAG 70 8.125346E-4 18.856531 13 TAGTACG 60 0.0074136523 18.332737 2 CGCAATA 305 0.0 18.033636 36 CCGTCGT 520 0.0 17.768652 9 CGTCGTA 520 0.0 17.768652 10 TAGGACG 260 0.0 17.768652 4 CGGCGTT 570 0.0 17.755222 41 GATATAC 350 0.0 17.605028 1 CGTTTAG 100 2.4838368E-5 17.599426 13 ACGGTAT 615 0.0 17.527885 9 TACGACG 590 0.0 17.524853 5 ACCGTCG 540 0.0 17.517948 8 ATACCGT 515 0.0 17.513992 6 CGACGGT 595 0.0 17.377586 7 TACCGTC 520 0.0 17.345589 7 GACGGTA 610 0.0 17.310913 8 CGCGGGA 350 0.0 16.970877 44 >>END_MODULE