##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062276_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 160303 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.707354197987563 32.0 32.0 32.0 32.0 32.0 2 31.185486235441633 32.0 32.0 32.0 32.0 32.0 3 31.426292708183876 32.0 32.0 32.0 32.0 32.0 4 31.647292938996774 32.0 32.0 32.0 32.0 32.0 5 31.608834519628452 32.0 32.0 32.0 32.0 32.0 6 35.18562347554319 36.0 36.0 36.0 36.0 36.0 7 35.16151288497408 36.0 36.0 36.0 36.0 36.0 8 35.13087715139454 36.0 36.0 36.0 36.0 36.0 9 35.10396561511637 36.0 36.0 36.0 36.0 36.0 10 35.05700454763791 36.0 36.0 36.0 36.0 36.0 11 35.17969096024404 36.0 36.0 36.0 36.0 36.0 12 35.088644629233386 36.0 36.0 36.0 36.0 36.0 13 35.11691609015427 36.0 36.0 36.0 36.0 36.0 14 35.044072787159315 36.0 36.0 36.0 36.0 36.0 15 35.09051608516372 36.0 36.0 36.0 36.0 36.0 16 35.092955216059586 36.0 36.0 36.0 36.0 36.0 17 35.06365445437702 36.0 36.0 36.0 36.0 36.0 18 35.05862023792443 36.0 36.0 36.0 36.0 36.0 19 34.997068052375816 36.0 36.0 36.0 36.0 36.0 20 34.87763797308846 36.0 36.0 36.0 32.0 36.0 21 34.838399780415834 36.0 36.0 36.0 32.0 36.0 22 34.890813022838 36.0 36.0 36.0 32.0 36.0 23 34.92666388027673 36.0 36.0 36.0 36.0 36.0 24 34.93386274742207 36.0 36.0 36.0 36.0 36.0 25 34.947780141357306 36.0 36.0 36.0 36.0 36.0 26 34.93429318228605 36.0 36.0 36.0 36.0 36.0 27 34.935328721234164 36.0 36.0 36.0 36.0 36.0 28 34.91460546589895 36.0 36.0 36.0 36.0 36.0 29 34.86369562640749 36.0 36.0 36.0 32.0 36.0 30 34.85818730778588 36.0 36.0 36.0 32.0 36.0 31 34.80798238336151 36.0 36.0 36.0 32.0 36.0 32 34.72775306762818 36.0 36.0 36.0 32.0 36.0 33 34.62587100678091 36.0 36.0 36.0 32.0 36.0 34 34.52619726393143 36.0 36.0 36.0 32.0 36.0 35 34.48972258784926 36.0 36.0 36.0 32.0 36.0 36 34.4760172922528 36.0 36.0 36.0 32.0 36.0 37 34.44496983836859 36.0 36.0 36.0 32.0 36.0 38 34.39529515979115 36.0 36.0 36.0 32.0 36.0 39 34.28574012962952 36.0 36.0 36.0 32.0 36.0 40 34.25731895223421 36.0 36.0 36.0 32.0 36.0 41 34.15725220363936 36.0 36.0 36.0 32.0 36.0 42 34.06185161849747 36.0 36.0 36.0 32.0 36.0 43 33.96155405700455 36.0 36.0 36.0 32.0 36.0 44 33.83698371209522 36.0 36.0 36.0 32.0 36.0 45 33.66721146828194 36.0 36.0 36.0 27.0 36.0 46 33.46180670355514 36.0 36.0 36.0 21.0 36.0 47 33.24569721090685 36.0 36.0 36.0 14.0 36.0 48 33.0967979389032 36.0 36.0 36.0 14.0 36.0 49 32.96870301865842 36.0 36.0 36.0 14.0 36.0 50 32.53375170770354 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 5.0 21 9.0 22 28.0 23 56.0 24 162.0 25 369.0 26 765.0 27 1547.0 28 2555.0 29 3916.0 30 5249.0 31 6835.0 32 9397.0 33 13760.0 34 23800.0 35 91849.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.57837986247176 18.92510826292603 13.018382857642052 22.478129016960153 2 15.20499575784798 21.192668563158158 39.15069621200779 24.451639466986073 3 18.79514915596811 27.656548265149528 28.660278723908622 24.88802385497374 4 11.349132580176292 15.739568192735007 34.70240731614505 38.20889191094365 5 12.581798219621593 39.199515916732686 31.036848967268238 17.181836896377487 6 31.70059200389263 36.22015807564425 17.005920038926284 15.07332988153684 7 28.089929695638883 33.291953363318214 19.563576477046592 19.054540463996304 8 29.967623812405257 30.845336643730935 18.515561156060713 20.671478387803095 9 29.181612321665845 13.171930656319594 19.319663387459997 38.32679363455456 10 17.351515567394244 28.26834182766386 29.622652102580737 24.757490502361154 11 34.85461906514538 22.836129080553704 22.30401177769599 20.00524007660493 12 26.40998608884425 25.929021914748944 28.4972832698078 19.163708726599 13 30.499741115262967 21.377017273538236 26.65452299707429 21.4687186141245 14 24.553501805954973 19.56919084483759 29.10113971666157 26.776167632545867 15 23.8205148999083 27.49543052843677 27.20348340330499 21.48057116834994 16 22.213696647577695 26.916070916145774 27.489987648313807 23.38024478796272 17 20.732612614860606 25.71505212004766 28.57900351209896 24.97333175299277 18 21.12873745344753 24.271535779118295 33.056149916096395 21.54357685133778 19 23.54166796628884 22.85297218392669 32.903938167096065 20.70142168268841 20 24.54663980087709 22.101270718576696 32.2576620524881 21.094427428058115 21 25.29522217300986 21.701402968129106 31.96633874599976 21.03703611286127 22 23.99580793871606 22.598454177401546 31.930781083323456 21.474956800558942 23 22.505645593941438 23.18685980212349 32.93970131377026 21.367793290164812 24 22.352185250339986 23.38024478796272 33.0663372883682 21.20123267332909 25 22.392594025065033 23.79992888467465 32.99314423310855 20.81433285715177 26 21.31962595834139 24.783067066742355 33.30567737347398 20.591629601442268 27 21.159928385619732 24.7737097870907 33.14972271261299 20.91663911467658 28 21.09094765472455 24.7852477526653 33.01351831866302 21.11028627394714 29 20.752574811450817 24.721932839684847 32.799136634997474 21.726355713866866 30 20.77978789769183 25.41983780411728 32.66812227074236 21.132252027448533 31 21.05575067216459 25.17607281211206 32.140384147520635 21.627792368202716 32 20.796242116491896 25.570326194768654 31.990667673094077 21.642764015645373 33 21.14558055682052 24.99391776822642 32.173446535623164 21.687055139329896 34 21.816945515339796 25.196816009781536 32.09317413382241 20.893064341056256 35 21.492557797157865 25.566118950480966 32.05699242679442 20.884330825566742 36 21.013954823053844 26.722519229209684 31.303219528018815 20.960306419717657 37 21.19624209304937 26.713952414817033 31.487442452371152 20.602363039762448 38 21.116261080578656 27.223445599895197 31.28388115007205 20.3764121694541 39 21.367036175243133 26.90841718495599 31.303219528018815 20.421327111782063 40 21.322121232915165 27.4149579234325 30.998796030018156 20.26412481363418 41 20.805105363626154 27.59229454404811 31.239784905989943 20.36281518633579 42 21.25357938275533 28.047388220321533 30.433019532980232 20.266012863942905 43 20.945364259067485 28.249260751849683 30.02719934122696 20.778175647855868 44 20.654160714174314 28.530789721579318 29.379838674460533 21.435210889785836 45 21.157205240174672 28.636306924516532 28.840923268870867 21.36556456643793 46 21.313919612723723 28.696997485948135 28.01639436303408 21.972688538294065 47 22.101822219726884 29.125571588094743 27.448081397887698 21.32452479429067 48 22.105079289822704 29.848157806086164 26.470074486269326 21.576688417821806 49 21.927619142684243 30.176990598349253 26.20733540872538 21.688054850241123 50 21.600479095706852 30.850519644171627 25.977841823558034 21.571159436563487 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 77.0 1 67.0 2 57.0 3 160.0 4 263.0 5 262.5 6 262.0 7 225.0 8 188.0 9 282.0 10 376.0 11 589.0 12 802.0 13 1569.5 14 2337.0 15 3040.0 16 3743.0 17 3881.5 18 4020.0 19 3871.5 20 3723.0 21 3609.0 22 3495.0 23 3110.0 24 2725.0 25 2292.0 26 1859.0 27 1971.5 28 2084.0 29 2442.5 30 2801.0 31 3511.5 32 4222.0 33 4785.5 34 5349.0 35 5487.5 36 5626.0 37 5765.5 38 5905.0 39 6041.0 40 6177.0 41 6618.5 42 7060.0 43 7280.0 44 7500.0 45 8048.0 46 8596.0 47 8788.0 48 8980.0 49 9296.5 50 9613.0 51 9599.5 52 9586.0 53 9591.0 54 9596.0 55 9479.0 56 9362.0 57 9096.5 58 8831.0 59 8061.5 60 7292.0 61 6500.0 62 5708.0 63 4806.5 64 3905.0 65 3375.0 66 2845.0 67 2402.0 68 1959.0 69 1619.0 70 1279.0 71 1021.5 72 764.0 73 669.5 74 575.0 75 423.5 76 272.0 77 231.5 78 191.0 79 165.5 80 140.0 81 107.0 82 74.0 83 60.0 84 46.0 85 35.0 86 24.0 87 14.0 88 4.0 89 3.5 90 3.0 91 2.0 92 1.0 93 2.5 94 4.0 95 2.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02807183895497901 2 0.004366730504107846 3 6.238186434439779E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.238186434439779E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 6.238186434439779E-4 24 6.238186434439779E-4 25 0.0 26 0.0 27 0.0 28 0.0012476372868879559 29 0.0 30 0.001871455930331934 31 0.0 32 0.0 33 0.0 34 6.238186434439779E-4 35 6.238186434439779E-4 36 0.0 37 6.238186434439779E-4 38 0.0 39 0.0 40 0.0 41 6.238186434439779E-4 42 0.00623818643443978 43 0.00311909321721989 44 0.003742911860663868 45 0.001871455930331934 46 0.0024952745737759118 47 0.0024952745737759118 48 0.00311909321721989 49 0.007485823721327736 50 6.238186434439779E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 160303.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.76586193100881 #Duplication Level Percentage of deduplicated Percentage of total 1 81.83267629176156 55.45461843032451 2 12.76884210399572 17.30583182076452 3 2.8199114889420924 5.732811978519458 4 0.9381868684225719 2.5430816716403815 5 0.45600632891996534 1.5450830962628277 6 0.23747493653500001 0.9655616256783535 7 0.16663088439936874 0.7904319853954659 8 0.12472364904365599 0.6761604464499191 9 0.07982312984427681 0.4868354876335425 >10 0.4959011891170766 6.2876154904437636 >50 0.03592040805842193 1.6072332529675586 >100 0.0399115645093577 4.7581406820078715 >500 0.00399115645093577 1.8465940319118228 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 985 0.6144613637923183 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 672 0.41920612839435323 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 538 0.33561443017286013 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 536 0.3343667928859722 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 492 0.3069187725744371 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 476 0.29693767427933354 No Hit ATACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 413 0.25763709974236293 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 370 0.23081289807427183 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 323 0.20149342183240487 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 261 0.16281666593887825 No Hit ATATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 222 0.13848773884456309 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGT 187 0.11665408632402388 No Hit GGTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAA 185 0.11540644903713591 No Hit ATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA 175 0.10916826260269615 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTT 169 0.10542535074203228 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 167 0.10417771345514432 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 6.238186434439779E-4 16 0.0 0.0 0.0 0.0 6.238186434439779E-4 17 0.0 0.0 0.0 0.0 6.238186434439779E-4 18 0.0 0.0 0.0 0.0 6.238186434439779E-4 19 0.0 0.0 0.0 0.0 6.238186434439779E-4 20 0.0 0.0 0.0 0.0 6.238186434439779E-4 21 0.0 0.0 0.0 0.0 6.238186434439779E-4 22 0.0 0.0 0.0 6.238186434439779E-4 6.238186434439779E-4 23 0.0 0.0 0.0 0.0024952745737759118 6.238186434439779E-4 24 0.0 0.0 0.0 0.008109642364771713 6.238186434439779E-4 25 0.0 0.0 0.0 0.010604916938547626 6.238186434439779E-4 26 0.0 0.0 0.0 0.01247637286887956 6.238186434439779E-4 27 0.0 0.0 0.0 0.01497164744265547 6.238186434439779E-4 28 0.0 0.0 0.0 0.019338377946763317 6.238186434439779E-4 29 0.0 0.0 0.0 0.02994329488531094 6.238186434439779E-4 30 0.0 0.0 0.0 0.04990549147551824 6.238186434439779E-4 31 0.0 0.0 0.0 0.09731570837726056 6.238186434439779E-4 32 0.0 0.0 0.0 0.1334971896970113 6.238186434439779E-4 33 0.0 0.0 0.0 0.1584499354347704 6.238186434439779E-4 34 0.0 0.0 0.0 0.1921361421807452 6.238186434439779E-4 35 0.0 0.0 0.0 0.22831762350049595 6.238186434439779E-4 36 0.0 0.0 0.0 0.2863327573407859 6.238186434439779E-4 37 0.0 0.0 0.0 0.3424764352507439 6.238186434439779E-4 38 0.0 0.0 0.0 0.4104726673861375 6.238186434439779E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCG 25 0.0023467294 35.2 41 GAACGAA 25 0.0023467294 35.2 26 ACTATAC 35 3.2055215E-4 31.428572 3 CTAGAGT 30 0.0057303496 29.333336 4 ACGTTTT 30 0.0057303496 29.333336 29 CACGAAT 30 0.0057303496 29.333336 14 TTAAGAC 30 0.0057303496 29.333336 3 ATACATG 180 0.0 26.88889 1 GACGTGG 60 9.684292E-6 25.666668 7 AGAAAAC 115 1.2732926E-11 24.869566 23 AGGGTGA 45 0.0013929362 24.444445 6 GCCCGAG 45 0.0013929362 24.444445 12 TAGGACC 55 1.5852263E-4 24.0 4 GTAGGAC 85 2.3263237E-7 23.294119 3 CTGTAGG 90 4.0363193E-7 22.0 1 AGGACCG 50 0.002570776 22.0 5 AAAATAG 50 0.002570776 22.0 34 GGAATAT 95 6.79016E-7 20.842106 12 TGTAGGA 95 6.79016E-7 20.842106 2 ATGGGAC 65 4.9065443E-4 20.307693 12 >>END_MODULE