##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062275_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 222829 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.163739908180712 32.0 32.0 32.0 21.0 32.0 2 28.743843934137836 32.0 32.0 32.0 14.0 32.0 3 30.346902781953876 32.0 32.0 32.0 21.0 32.0 4 30.913242890288068 32.0 32.0 32.0 32.0 32.0 5 30.618380013373482 32.0 32.0 32.0 32.0 32.0 6 34.179657943983955 36.0 36.0 36.0 32.0 36.0 7 34.182673709436386 36.0 36.0 36.0 32.0 36.0 8 34.04271436841704 36.0 36.0 36.0 32.0 36.0 9 34.38796565976601 36.0 36.0 36.0 32.0 36.0 10 33.91094516422907 36.0 36.0 36.0 32.0 36.0 11 34.60744337586221 36.0 36.0 36.0 32.0 36.0 12 34.20667417616199 36.0 36.0 36.0 32.0 36.0 13 34.41145901117 36.0 36.0 36.0 32.0 36.0 14 34.25082013561969 36.0 36.0 36.0 32.0 36.0 15 34.17156204982296 36.0 36.0 36.0 32.0 36.0 16 34.2019799936274 36.0 36.0 36.0 32.0 36.0 17 34.152201912677434 36.0 36.0 36.0 32.0 36.0 18 34.20476688402317 36.0 36.0 36.0 32.0 36.0 19 34.198313504974664 36.0 36.0 36.0 32.0 36.0 20 34.215856104905555 36.0 36.0 36.0 32.0 36.0 21 34.195118229673874 36.0 36.0 36.0 32.0 36.0 22 34.1515332384923 36.0 36.0 36.0 32.0 36.0 23 34.072315542411445 36.0 36.0 36.0 32.0 36.0 24 34.06268483904698 36.0 36.0 36.0 32.0 36.0 25 34.00498139829197 36.0 36.0 36.0 32.0 36.0 26 33.93664648676788 36.0 36.0 36.0 32.0 36.0 27 33.93513411629546 36.0 36.0 36.0 32.0 36.0 28 33.825408721485985 36.0 36.0 36.0 32.0 36.0 29 33.78591206710078 36.0 36.0 36.0 32.0 36.0 30 33.766677586849106 36.0 36.0 36.0 32.0 36.0 31 33.76114868351965 36.0 36.0 36.0 32.0 36.0 32 33.710567295998274 36.0 36.0 36.0 32.0 36.0 33 33.66665469934344 36.0 36.0 36.0 27.0 36.0 34 33.616625304605776 36.0 36.0 36.0 27.0 36.0 35 33.62047130310687 36.0 36.0 36.0 27.0 36.0 36 33.51652163766835 36.0 36.0 36.0 21.0 36.0 37 33.566645275076404 36.0 36.0 36.0 27.0 36.0 38 33.488872633274845 36.0 36.0 36.0 21.0 36.0 39 33.47854184150178 36.0 36.0 36.0 21.0 36.0 40 33.45258022968285 36.0 36.0 36.0 21.0 36.0 41 33.39085576832459 36.0 36.0 36.0 21.0 36.0 42 33.32214837386516 36.0 36.0 36.0 21.0 36.0 43 33.354729411342326 36.0 36.0 36.0 21.0 36.0 44 33.22695878902656 36.0 36.0 36.0 21.0 36.0 45 33.192255047592546 36.0 36.0 36.0 21.0 36.0 46 33.11916761283316 36.0 36.0 36.0 21.0 36.0 47 33.17437586669599 36.0 36.0 36.0 21.0 36.0 48 33.055621126514055 36.0 36.0 36.0 14.0 36.0 49 33.05295540526592 36.0 36.0 36.0 14.0 36.0 50 32.38566793370701 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 7.0 21 16.0 22 34.0 23 76.0 24 258.0 25 559.0 26 1133.0 27 2155.0 28 4049.0 29 7068.0 30 11193.0 31 18025.0 32 27354.0 33 42079.0 34 60263.0 35 48560.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.02810731229998 18.6907791677327 13.16986027137785 26.11125324858947 2 19.034048836092573 20.544188989664626 34.880871707647636 25.54089046659516 3 21.53400140915231 22.93283190249025 28.255747680957143 27.277419007400294 4 16.047731668678672 16.589402636102125 35.70630393709975 31.656561758119455 5 20.434054813332196 32.22471042817587 30.502762207791623 16.838472550700313 6 35.102253297371526 36.51185438161101 14.373353558109581 14.01253876290788 7 30.37216879311041 30.135664567897358 19.06259957186901 20.42956706712322 8 28.74087304614749 32.20810576720265 17.45688397829726 21.594137208352592 9 26.472766112130824 13.24109518958484 17.144088067531605 43.142050630752735 10 16.594339156931998 25.141251811927535 29.3292165741443 28.935192456996173 11 39.102181493432184 20.079074088202166 20.707807332079756 20.110937086285897 12 24.37968128026424 22.99162137782784 27.46007027810563 25.16862706380229 13 29.672080384510096 18.609337204762397 23.996427754017656 27.72215465670985 14 24.150357448985545 18.79109092622594 23.60374996073222 33.45480166405629 15 26.51405337725341 25.488603368502304 20.723065669190277 27.27427758505401 16 26.540650187588632 25.947367476259714 22.152961028237026 25.359021307914624 17 24.21049324818583 26.086371163537958 23.532843570630394 26.170292017645817 18 25.7750372484607 24.87568887213456 24.662519970560254 24.686753908844487 19 26.44987860646505 24.692028416408995 24.102787339170394 24.755305637955562 20 26.632978651791284 23.582208778929132 23.505917093376535 26.278895475903045 21 27.411602619048686 23.498287924821277 23.604647509974015 25.48546194615602 22 25.895193175035562 24.53764994682021 23.9493064188234 25.617850459320824 23 25.01065839724632 24.053422130871656 24.787617410660193 26.148302061221834 24 25.285421939792123 24.944351697273234 24.272981851472885 25.49724451146175 25 25.17580745773665 23.945267447235324 24.613941632372807 26.264983462655223 26 25.3317596162045 24.283412692357746 24.2609737599124 26.123853931525353 27 25.727351466819847 23.948857644202505 24.65478012287449 25.669010766103156 28 24.95781499632003 24.458775378318702 25.14630118297521 25.43710844238606 29 25.3373663212598 24.7292767099435 24.416032024556948 25.517324944239757 30 25.149891396054358 24.557057461360333 25.20329581560666 25.089755326978658 31 25.787038491399233 24.32582832575652 24.412890602210663 25.474242580633582 32 25.769087506563327 24.817236535639438 23.61766197398005 25.79601398381719 33 25.08829640666161 24.13644543573772 24.846406885997784 25.928851271602888 34 25.647584684151003 24.237528497316315 24.833952645089486 25.280934173443192 35 26.90954458147091 23.7375913260452 24.42152691762256 24.93133717486133 36 24.60765878768024 24.5205965112261 24.749022793262995 26.12272190783067 37 26.273415131088836 24.334682667193235 24.38494610144238 25.006956100275552 38 25.366536671618146 24.051627032388065 24.81678776101854 25.76504853497525 39 26.225726684827244 24.177052152566787 23.771356253954863 25.82586490865111 40 26.192399518911447 24.982946487874056 24.138797637639794 24.685856355574703 41 25.288341575938176 24.380907075475932 24.882643856641504 25.448107491944388 42 26.317773618946323 25.8451927349104 23.784775984094715 24.052257662048568 43 25.80792826593305 23.96296612109163 24.846627143517498 25.38247846945782 44 25.698103384825284 24.594063316249137 23.91907296537982 25.788760333545763 45 26.18354149182999 25.097048382826138 23.85348274670484 24.865927378639032 46 25.165827431761674 24.672608629309494 24.300113992334687 25.861449946594146 47 25.353749770000945 24.295529715878235 25.018512119267417 25.332208394853406 48 26.125572210753074 25.556503006911406 23.63028453460192 24.687640247733597 49 25.23112411589416 24.993717014325206 24.285085987146807 25.49007288263383 50 26.46549325482664 24.919443871002485 23.847306867241706 24.767756006929172 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4.0 1 2.5 2 1.0 3 5.5 4 10.0 5 11.5 6 13.0 7 12.5 8 12.0 9 21.5 10 31.0 11 49.5 12 68.0 13 118.0 14 168.0 15 229.5 16 291.0 17 380.0 18 469.0 19 499.0 20 529.0 21 669.5 22 810.0 23 974.0 24 1138.0 25 1388.5 26 1639.0 27 2032.0 28 2425.0 29 2767.0 30 3109.0 31 3364.5 32 3620.0 33 4013.5 34 4407.0 35 4967.5 36 5528.0 37 6382.5 38 7237.0 39 7953.5 40 8670.0 41 9504.5 42 10339.0 43 10325.5 44 10312.0 45 11126.0 46 11940.0 47 12739.0 48 13538.0 49 14248.0 50 14958.0 51 14994.5 52 15031.0 53 15044.5 54 15058.0 55 15978.5 56 16899.0 57 16406.5 58 15914.0 59 14781.5 60 13649.0 61 12633.5 62 11618.0 63 10281.0 64 8944.0 65 7854.5 66 6765.0 67 5876.0 68 4987.0 69 4693.0 70 4399.0 71 3446.5 72 2494.0 73 2290.0 74 2086.0 75 1608.5 76 1131.0 77 992.0 78 853.0 79 718.5 80 584.0 81 492.0 82 400.0 83 338.5 84 277.0 85 225.0 86 173.0 87 116.5 88 60.0 89 48.5 90 37.0 91 28.0 92 19.0 93 13.5 94 8.0 95 13.0 96 18.0 97 18.5 98 19.0 99 79.5 100 140.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01795098483590556 2 8.97549241795278E-4 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.48774620897639E-4 17 0.0 18 4.48774620897639E-4 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 4.48774620897639E-4 25 0.0 26 8.97549241795278E-4 27 0.0 28 4.48774620897639E-4 29 0.0 30 4.48774620897639E-4 31 0.0 32 0.0 33 0.0 34 4.48774620897639E-4 35 4.48774620897639E-4 36 0.0 37 0.001346323862692917 38 0.0 39 8.97549241795278E-4 40 4.48774620897639E-4 41 0.001346323862692917 42 0.00448774620897639 43 0.002692647725385834 44 0.004936520829874029 45 8.97549241795278E-4 46 0.0031414223462834733 47 8.97549241795278E-4 48 0.00403897158807875 49 0.002243873104488195 50 0.001346323862692917 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 222829.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.82528974664598 #Duplication Level Percentage of deduplicated Percentage of total 1 88.6591653014654 62.793110711720686 2 6.840040042839346 9.68895635825515 3 1.730796470750473 3.6775248460012357 4 0.7340113933260702 2.07946278438633 5 0.4451028161586098 1.5762267960740821 6 0.28559415317992964 1.2136373189349907 7 0.2060507246684674 1.0215521594005403 8 0.14549582564417873 0.8243827206541154 9 0.12130640257008483 0.7732404999134586 >10 0.7416386049822189 9.742558648742374 >50 0.06032052531079341 2.9307420164054894 >100 0.03047773910440088 3.6786051395115704 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 395 0.1772659752545674 No Hit GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG 377 0.1691880320784099 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 376 0.16873925745751225 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 302 0.135529935511087 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 267 0.11982282377966962 No Hit TTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGAC 263 0.11802772529607905 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 257 0.11533507757069324 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 256 0.11488630294979559 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 254 0.11398875370800031 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.48774620897639E-4 2 0.0 0.0 0.0 0.0 4.48774620897639E-4 3 0.0 0.0 0.0 0.0 4.48774620897639E-4 4 0.0 0.0 0.0 0.0 4.48774620897639E-4 5 0.0 0.0 0.0 0.0 4.48774620897639E-4 6 0.0 0.0 0.0 0.0 4.48774620897639E-4 7 0.0 0.0 0.0 0.0 4.48774620897639E-4 8 0.0 0.0 0.0 0.0 4.48774620897639E-4 9 0.0 0.0 0.0 0.0 4.48774620897639E-4 10 0.0 0.0 0.0 0.0 4.48774620897639E-4 11 0.0 0.0 0.0 0.0 4.48774620897639E-4 12 0.0 0.0 0.0 0.0 8.97549241795278E-4 13 0.0 0.0 0.0 0.0 8.97549241795278E-4 14 0.0 0.0 0.0 0.0 8.97549241795278E-4 15 0.0 0.0 0.0 0.0 8.97549241795278E-4 16 0.0 0.0 0.0 0.0 8.97549241795278E-4 17 0.0 0.0 0.0 0.0 8.97549241795278E-4 18 0.0 0.0 0.0 0.0 8.97549241795278E-4 19 0.0 0.0 0.0 0.0 8.97549241795278E-4 20 0.0 0.0 0.0 0.0 0.001346323862692917 21 0.0 0.0 0.0 0.0 0.001346323862692917 22 0.0 0.0 0.0 0.0 0.001346323862692917 23 0.0 0.0 0.0 0.0 0.001346323862692917 24 0.0 0.0 0.0 0.0 0.001346323862692917 25 0.0 0.0 0.0 0.0 0.001346323862692917 26 0.0 0.0 0.0 4.48774620897639E-4 0.002243873104488195 27 0.0 0.0 0.0 4.48774620897639E-4 0.002243873104488195 28 0.0 0.0 0.0 4.48774620897639E-4 0.002243873104488195 29 0.0 0.0 0.0 4.48774620897639E-4 0.002243873104488195 30 0.0 0.0 0.0 4.48774620897639E-4 0.002243873104488195 31 0.0 0.0 0.0 0.001346323862692917 0.002243873104488195 32 0.0 0.0 0.0 0.001795098483590556 0.002243873104488195 33 0.0 0.0 0.0 0.001795098483590556 0.002243873104488195 34 0.0 0.0 0.0 0.003141422346283473 0.002243873104488195 35 0.0 0.0 0.0 0.003141422346283473 0.002243873104488195 36 0.0 0.0 0.0 0.00448774620897639 0.002243873104488195 37 0.0 0.0 0.0 0.006282844692566946 0.002243873104488195 38 0.0 0.0 0.0 0.009873041659748057 0.002243873104488195 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAATGC 25 0.002349512 35.197487 3 GGTAGTG 65 1.7345883E-8 30.459364 16 CTCACGA 30 0.0057370923 29.33124 18 CGAACTG 30 0.0057370923 29.33124 10 GTATCAA 190 0.0 28.945301 1 ATACGAA 70 3.5577614E-8 28.290045 40 TAGTGAC 70 3.565583E-8 28.283695 18 TACGAAT 80 4.269168E-9 27.504208 41 AGTGACG 65 5.898437E-7 27.074991 19 GTGACGA 65 5.898437E-7 27.074991 20 AGGTAGT 75 6.963637E-8 26.398115 15 TAGGGAC 50 8.315524E-5 26.398115 3 GTAGTGA 75 6.963637E-8 26.398115 17 CGAAAAA 70 1.126049E-6 25.141064 24 ACGAAAA 70 1.126049E-6 25.141064 23 TCCCGAC 80 1.3007411E-7 24.748232 2 GGAGGTA 80 1.3007411E-7 24.748232 13 GAGTAAG 45 0.0013952219 24.442698 1 GCAGTTA 45 0.0013952219 24.442698 15 TTCGAGT 45 0.0013952219 24.442698 26 >>END_MODULE