##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062274_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1511702 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.224806211806296 32.0 32.0 32.0 32.0 32.0 2 30.725077429281697 32.0 32.0 32.0 32.0 32.0 3 30.757025524871967 32.0 32.0 32.0 32.0 32.0 4 30.759991056438373 32.0 32.0 32.0 32.0 32.0 5 30.664396818949765 32.0 32.0 32.0 32.0 32.0 6 34.32278319404221 36.0 36.0 36.0 32.0 36.0 7 34.26021464547907 36.0 36.0 36.0 32.0 36.0 8 34.20881959539645 36.0 36.0 36.0 32.0 36.0 9 34.35434827763673 36.0 36.0 36.0 32.0 36.0 10 34.02604018516877 36.0 36.0 36.0 32.0 36.0 11 34.34187293527428 36.0 36.0 36.0 32.0 36.0 12 34.15343963294353 36.0 36.0 36.0 32.0 36.0 13 34.24653007007995 36.0 36.0 36.0 32.0 36.0 14 34.13627090524455 36.0 36.0 36.0 32.0 36.0 15 34.087287044668855 36.0 36.0 36.0 32.0 36.0 16 34.092534772064866 36.0 36.0 36.0 32.0 36.0 17 34.018810585684214 36.0 36.0 36.0 32.0 36.0 18 34.021674906826874 36.0 36.0 36.0 32.0 36.0 19 34.030503366404226 36.0 36.0 36.0 32.0 36.0 20 34.01684326672849 36.0 36.0 36.0 32.0 36.0 21 34.0093576644074 36.0 36.0 36.0 32.0 36.0 22 33.97359664801661 36.0 36.0 36.0 32.0 36.0 23 33.93305492749232 36.0 36.0 36.0 32.0 36.0 24 33.91133636126697 36.0 36.0 36.0 32.0 36.0 25 33.54736317078366 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 21.0 5 130.0 6 336.0 7 68.0 8 255.0 9 200.0 10 103.0 11 26.0 12 60.0 13 73.0 14 251.0 15 415.0 16 566.0 17 766.0 18 1109.0 19 1500.0 20 2203.0 21 3047.0 22 4583.0 23 6782.0 24 9521.0 25 13545.0 26 18162.0 27 23423.0 28 31706.0 29 41509.0 30 54263.0 31 73616.0 32 104872.0 33 148653.0 34 320253.0 35 649683.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.59227246928264 16.989242474958424 11.768316965295703 25.650168090463232 2 17.069866421820745 19.122325277717323 36.78529918985195 27.02250911060998 3 19.574967453773777 22.268763031720663 27.741622654290282 30.41464686021528 4 13.247893216613985 15.150316298676984 34.15681692783415 37.444973556874885 5 15.868809109750579 35.640946232460635 32.51926319439482 15.970981463393974 6 36.051935672843655 33.81650410567182 16.011226472233346 14.120333749251182 7 31.678980608273616 29.576107708414867 19.418347541218097 19.326564142093417 8 28.87630806233933 32.50497663003672 18.692527042007658 19.926188265616286 9 27.11606676892347 14.397347151247347 18.126210325817723 40.360375754011464 10 16.90858726495704 26.528160114034087 30.10113106766535 26.462121553343525 11 38.01104277003282 20.985833854999882 21.146341544199235 19.856781830768057 12 24.848066947912546 23.044542962196076 28.074975939103574 24.0324141507878 13 29.683045791252926 19.18177675571993 24.468607928955205 26.66656952407194 14 23.818035517379542 19.218458705996497 24.426393989264653 32.53711178735931 15 25.44453872297413 26.816191973165726 21.54505067526169 26.194218628598453 16 26.565617965175154 25.43719811722506 22.800796609574547 25.196387308025237 17 24.639781381822132 25.708498940621137 24.538314147062586 25.11340553049415 18 25.38268566728433 24.770494560876724 25.351294647764945 24.495525124073996 19 26.105874157731918 24.574429482561342 24.449744670932745 24.869951688773998 20 26.124294264131105 24.149458750992352 24.23579904164926 25.490447943227284 21 26.994748118936702 23.847724582140426 24.040465703865944 25.117061595056928 22 26.35365961062069 23.849201435356957 24.480663140740603 25.316475813281752 23 24.884125087307552 24.127470679558943 25.025075059667056 25.963329173466448 24 25.22126501281539 24.606218793306994 24.833591892434118 25.338924301443495 25 25.228890678051393 24.09714975819822 24.728469577469266 25.945489986281128 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 396.0 1 396.0 2 434.5 3 473.0 4 473.0 5 473.0 6 1007.5 7 1542.0 8 1542.0 9 1542.0 10 1904.5 11 2267.0 12 2267.0 13 2267.0 14 3048.0 15 3829.0 16 3829.0 17 3829.0 18 6013.0 19 8197.0 20 8197.0 21 8197.0 22 12754.0 23 17311.0 24 17311.0 25 17311.0 26 25408.5 27 33506.0 28 33506.0 29 33506.0 30 43122.5 31 52739.0 32 52739.0 33 52739.0 34 66806.0 35 80873.0 36 80873.0 37 80873.0 38 96246.0 39 111619.0 40 111619.0 41 111619.0 42 132768.0 43 153917.0 44 153917.0 45 153917.0 46 171623.0 47 189329.0 48 189329.0 49 189329.0 50 197148.5 51 204968.0 52 204968.0 53 204968.0 54 197983.5 55 190999.0 56 190999.0 57 190999.0 58 178497.5 59 165996.0 60 165996.0 61 165996.0 62 147338.5 63 128681.0 64 128681.0 65 128681.0 66 105163.0 67 81645.0 68 81645.0 69 81645.0 70 62706.0 71 43767.0 72 43767.0 73 43767.0 74 32100.0 75 20433.0 76 20433.0 77 20433.0 78 16102.0 79 11771.0 80 11771.0 81 11771.0 82 7955.5 83 4140.0 84 4140.0 85 4140.0 86 3008.0 87 1876.0 88 1876.0 89 1876.0 90 1254.5 91 633.0 92 633.0 93 633.0 94 407.5 95 182.0 96 182.0 97 182.0 98 397.5 99 613.0 100 613.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0010584096601049678 2 1.9845181126968144E-4 3 3.969036225393629E-4 4 0.010319494186023436 5 0.035059819990977056 6 0.0652906459077252 7 0.1074947311044108 8 0.10875159257578543 9 0.11761577347916455 10 0.13084589423047663 11 0.14004082815263855 12 0.13170585207931193 13 0.12528924351492557 14 0.11490359872514555 15 0.13170585207931193 16 0.11926953857307855 17 0.12270936996841969 18 0.1135144360462578 19 0.09882900201230137 20 0.09254469465542811 21 0.09168473680659284 22 0.10286418884145156 23 0.08182829684686532 24 0.09320620069299372 25 0.09089092956151411 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1511702.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.623466543701426 #Duplication Level Percentage of deduplicated Percentage of total 1 75.4293441617362 36.67636192261521 2 13.533786269871959 13.161192078054498 3 4.441352479588253 6.478618611001344 4 2.0137046211374456 3.916531970990942 5 1.1336386484079886 2.756072044675637 6 0.7043246248745519 2.0548022900095697 7 0.494144221176703 1.681890350430417 8 0.34698196527079866 1.349717278368996 9 0.2461256804977707 1.0770735412106192 >10 1.42077382832313 12.852871469577071 >50 0.12835940118088401 4.3527018158633926 >100 0.09764510566210814 9.467674276798657 >500 0.007227869311509112 2.441011093863184 >1k 0.0025911229607296815 1.7334812565405673 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2854 0.18879382312122361 No Hit TATCAACGCAGAGTACTTTTTTTTT 1839 0.12165096030831474 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1566 0.10359184548277371 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3230120751312098E-4 2 0.0 0.0 0.0 0.0 1.3230120751312098E-4 3 0.0 0.0 0.0 0.0 1.3230120751312098E-4 4 0.0 0.0 0.0 0.0 1.3230120751312098E-4 5 0.0 0.0 0.0 0.0 1.3230120751312098E-4 6 0.0 0.0 0.0 0.0 1.3230120751312098E-4 7 6.615060375656049E-5 0.0 0.0 0.0 1.3230120751312098E-4 8 6.615060375656049E-5 0.0 0.0 6.615060375656049E-5 1.3230120751312098E-4 9 6.615060375656049E-5 0.0 0.0 6.615060375656049E-5 1.3230120751312098E-4 10 6.615060375656049E-5 0.0 0.0 1.3230120751312098E-4 1.3230120751312098E-4 11 6.615060375656049E-5 0.0 0.0 1.3230120751312098E-4 1.9845181126968147E-4 12 6.615060375656049E-5 0.0 0.0 2.6460241502624196E-4 8.599578488352863E-4 13 6.615060375656049E-5 0.0 0.0 2.6460241502624196E-4 8.599578488352863E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 85 3.6379788E-12 17.881044 16 TTGCGGA 40 0.005282736 14.248486 19 GGTATCA 595 0.0 13.88744 1 TAAGCCC 55 1.9591078E-4 13.819001 4 GTATCAA 1715 0.0 12.848245 1 GTACCGT 60 4.088716E-4 12.667837 6 GTATTAT 90 5.420279E-7 12.663643 1 ACGAACG 115 5.326001E-9 12.390807 15 CGTCGTA 300 0.0 12.350732 10 TAGGACT 85 3.9404895E-6 12.294847 4 GGTTCTA 240 0.0 12.270748 13 ATAACGA 125 1.4078978E-9 12.161124 12 TAACGAA 125 1.4097168E-9 12.159915 13 AACGAAC 125 1.4097168E-9 12.159915 14 TCATATA 55 0.0030715815 12.089224 2 ATCGCCA 290 0.0 11.79224 16 CCGTCGT 315 0.0 11.762602 9 CGCCAGT 300 0.0 11.716585 18 ACGTTCG 90 7.452383E-6 11.612185 7 TACCGTG 90 7.452383E-6 11.612185 7 >>END_MODULE