##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062274_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1511702 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.291740038711332 32.0 32.0 32.0 32.0 32.0 2 31.452228679991162 32.0 32.0 32.0 32.0 32.0 3 31.565968028090193 32.0 32.0 32.0 32.0 32.0 4 31.641966472227992 32.0 32.0 32.0 32.0 32.0 5 31.608610691789785 32.0 32.0 32.0 32.0 32.0 6 35.2478411750464 36.0 36.0 36.0 36.0 36.0 7 35.254187002464775 36.0 36.0 36.0 36.0 36.0 8 35.19994747642062 36.0 36.0 36.0 36.0 36.0 9 35.29234597824174 36.0 36.0 36.0 36.0 36.0 10 35.16898899386255 36.0 36.0 36.0 36.0 36.0 11 35.29018880705324 36.0 36.0 36.0 36.0 36.0 12 35.212670883547155 36.0 36.0 36.0 36.0 36.0 13 35.24584474982503 36.0 36.0 36.0 36.0 36.0 14 35.20474074916882 36.0 36.0 36.0 36.0 36.0 15 35.18786969918674 36.0 36.0 36.0 36.0 36.0 16 35.188422056728115 36.0 36.0 36.0 36.0 36.0 17 35.176999170471426 36.0 36.0 36.0 36.0 36.0 18 35.17130228047591 36.0 36.0 36.0 36.0 36.0 19 35.162235017219004 36.0 36.0 36.0 36.0 36.0 20 35.16111244147325 36.0 36.0 36.0 36.0 36.0 21 35.151185881873545 36.0 36.0 36.0 36.0 36.0 22 35.1366697933852 36.0 36.0 36.0 36.0 36.0 23 35.105465892087196 36.0 36.0 36.0 36.0 36.0 24 35.086009676510315 36.0 36.0 36.0 36.0 36.0 25 35.07141949934577 36.0 36.0 36.0 36.0 36.0 26 35.02709462579265 36.0 36.0 36.0 36.0 36.0 27 35.01770322457733 36.0 36.0 36.0 36.0 36.0 28 34.99876099919164 36.0 36.0 36.0 36.0 36.0 29 34.982835902843284 36.0 36.0 36.0 36.0 36.0 30 34.95496003842027 36.0 36.0 36.0 36.0 36.0 31 34.95544690686392 36.0 36.0 36.0 36.0 36.0 32 34.93248206326379 36.0 36.0 36.0 32.0 36.0 33 34.911940316279264 36.0 36.0 36.0 32.0 36.0 34 34.90576251139444 36.0 36.0 36.0 32.0 36.0 35 34.89086473392243 36.0 36.0 36.0 32.0 36.0 36 34.86640753270155 36.0 36.0 36.0 32.0 36.0 37 34.85648626515014 36.0 36.0 36.0 32.0 36.0 38 34.8318359041663 36.0 36.0 36.0 32.0 36.0 39 34.81669733849661 36.0 36.0 36.0 32.0 36.0 40 34.806828991428205 36.0 36.0 36.0 32.0 36.0 41 34.78753749085468 36.0 36.0 36.0 32.0 36.0 42 34.74295198392276 36.0 36.0 36.0 32.0 36.0 43 34.73655918957572 36.0 36.0 36.0 32.0 36.0 44 34.687302788512554 36.0 36.0 36.0 32.0 36.0 45 34.68061099343654 36.0 36.0 36.0 32.0 36.0 46 34.65727702946745 36.0 36.0 36.0 32.0 36.0 47 34.63444977912314 36.0 36.0 36.0 32.0 36.0 48 34.609320487768095 36.0 36.0 36.0 32.0 36.0 49 34.591589479937184 36.0 36.0 36.0 32.0 36.0 50 34.16818327950879 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 8.0 21 36.0 22 122.0 23 326.0 24 740.0 25 1798.0 26 3641.0 27 7077.0 28 11865.0 29 19001.0 30 28719.0 31 42358.0 32 64633.0 33 109959.0 34 250420.0 35 970997.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.19682028790251 17.558691535105076 12.16511845506172 26.079369721930696 2 16.492837570899912 19.609390608068864 36.417912225016835 27.47985959601439 3 18.932485192148167 22.650622015772992 28.05719131731338 30.359701474765462 4 12.98980420069842 15.451402096049415 34.18731614254406 37.37147756070811 5 15.501997086727409 35.963437238291675 32.36424903850097 16.170316636479942 6 36.29141780208891 33.93631933341227 15.825571095833233 13.946691768665588 7 31.700956934633943 29.61760981992483 19.38331761153984 19.298115633901393 8 28.96285114394239 32.642147724882285 18.454364682986462 19.94063644818886 9 27.284941079657234 14.152392468886063 18.003812920800527 40.55885353065617 10 16.769001786068667 26.610967784613347 30.159357015280808 26.460673414037178 11 38.240671772611265 20.87653519013668 21.100058080230095 19.78273495702195 12 24.988522870248236 22.974236985860973 28.08820786107315 23.949032282817644 13 29.85588429465596 19.079554039089714 24.50443275195773 26.560128914296598 14 23.83452558771504 19.123742642399097 24.430277925146623 32.61145384473924 15 25.538432839276524 26.813551877287985 21.53294763121303 26.11506765222246 16 26.6408413342912 25.294074065253945 22.81387635328314 25.251208247171714 17 24.78418365524422 25.524144308865104 24.569657247261695 25.122014788628977 18 25.44650033306851 24.60413798760469 25.54995994578293 24.39940173354387 19 26.217336485630106 24.348978833129813 24.508269486975607 24.925415194264477 20 26.270507554744693 23.949145960935343 24.353591554932564 25.426754929387396 21 27.22381792178617 23.70625956703107 24.0791505204068 24.990771990775958 22 26.47836676805349 23.730933742232267 24.579050632995127 25.211648856719115 23 24.97603692793747 23.917560417040143 25.170784434223435 25.935618220798958 24 25.536238652578213 24.386198994897754 24.851771563822407 25.22579078870163 25 25.385195475292715 23.841569094397038 24.981610107825627 25.791625322484617 26 25.086376436547802 24.801795597927363 25.20438950398129 24.90743846154355 27 25.79427345180513 24.165109916279466 24.46827933658619 25.572337295329216 28 25.303504190051306 24.194470243623634 25.00628441544352 25.49574115088154 29 25.24112054571963 24.550702127152885 24.968710557441597 25.239466769685887 30 25.192119288928755 24.495614513812676 24.99677513460092 25.315491062657646 31 25.684695447623657 24.22633151947418 24.25279190100642 25.836181131895742 32 25.69622455412456 23.951421224868344 24.315120371981276 26.037233849025824 33 25.20816010086677 23.84320402832049 24.89447290032328 26.054162970489458 34 25.933871406259613 24.093349765262875 24.842576955211086 25.13020187326643 35 26.2345042005689 23.882979427135016 24.874975193490773 25.00754117880532 36 25.161606138784148 24.577693986902162 24.775550704504862 25.485149169808825 37 26.0326631271028 24.153620423451088 24.383498029337012 25.430218420109096 38 25.404477866669488 24.086890141046315 24.861910614658182 25.646721377626015 39 25.872463775785608 23.861080534710684 24.492953609720473 25.77350207978324 40 26.043941287253613 24.155602404976122 24.93750409307673 24.862952214693536 41 25.310283512008482 24.456598676176604 25.06234776890907 25.17077004290585 42 26.544009028646503 24.381513237670784 24.441051498611106 24.63342623507161 43 25.892851826983186 23.82325215245643 24.506084431199124 25.77781158936126 44 25.238978541215445 24.53596817235827 24.620313539846077 25.604739746580208 45 25.526553762761555 24.57634574764714 24.46448263475668 25.43261785483462 46 25.224751433844688 24.419020024211633 24.689647872882308 25.666580669061368 47 25.641254626459876 24.298183814749766 24.895795089585462 25.164766469204892 48 26.27337455586111 24.67470609599023 23.923664011039715 25.12825533710894 49 25.465845494357197 24.903152825370782 24.152587221994366 25.478414458277655 50 25.700216183891257 24.94860009684615 24.067988113855083 25.28319560540751 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 140.0 1 103.5 2 67.0 3 178.5 4 290.0 5 298.0 6 306.0 7 229.0 8 152.0 9 242.5 10 333.0 11 555.5 12 778.0 13 1467.5 14 2157.0 15 2776.0 16 3395.0 17 3295.5 18 3196.0 19 2875.0 20 2554.0 21 2917.5 22 3281.0 23 4079.5 24 4878.0 25 6084.5 26 7291.0 27 8908.0 28 10525.0 29 12382.0 30 14239.0 31 16424.5 32 18610.0 33 21853.5 34 25097.0 35 29441.5 36 33786.0 37 39959.0 38 46132.0 39 51445.0 40 56758.0 41 62156.0 42 67554.0 43 72058.0 44 76562.0 45 85891.5 46 95221.0 47 102091.5 48 108962.0 49 113140.5 50 117319.0 51 115603.0 52 113887.0 53 115017.0 54 116147.0 55 118420.0 56 120693.0 57 117710.5 58 114728.0 59 106606.5 60 98485.0 61 87457.0 62 76429.0 63 66482.5 64 56536.0 65 47574.5 66 38613.0 67 32784.0 68 26955.0 69 23701.0 70 20447.0 71 15599.0 72 10751.0 73 9373.0 74 7995.0 75 5839.0 76 3683.0 77 3143.0 78 2603.0 79 2176.0 80 1749.0 81 1384.0 82 1019.0 83 877.0 84 735.0 85 566.5 86 398.0 87 274.0 88 150.0 89 95.5 90 41.0 91 32.5 92 24.0 93 20.0 94 16.0 95 16.5 96 17.0 97 13.5 98 10.0 99 9.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032810699463254 2 0.004233638640419871 3 2.6460241502624196E-4 4 6.615060375656049E-5 5 0.0 6 1.9845181126968144E-4 7 0.0 8 0.0 9 0.0 10 1.3230120751312098E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.292048300524839E-4 17 0.0 18 6.615060375656049E-5 19 0.0 20 1.9845181126968144E-4 21 0.0 22 0.0 23 6.615060375656049E-5 24 9.922590563484074E-4 25 1.3230120751312098E-4 26 3.3075301878280244E-4 27 3.969036225393629E-4 28 0.0017199156976705726 29 6.615060375656049E-4 30 7.276566413221653E-4 31 5.292048300524839E-4 32 8.599578488352863E-4 33 3.3075301878280244E-4 34 7.276566413221653E-4 35 1.3230120751312098E-4 36 1.3230120751312098E-4 37 0.0018522169051836935 38 0.0 39 3.969036225393629E-4 40 1.9845181126968144E-4 41 0.0013230120751312098 42 0.0045643916592026735 43 0.003770584414123948 44 0.0039690362253936295 45 0.002182969923966496 46 0.0021168193202099356 47 0.0011245602638615283 48 0.0045643916592026735 49 0.0027783253577755404 50 0.0017199156976705726 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1511702.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.806411599662695 #Duplication Level Percentage of deduplicated Percentage of total 1 74.95322518002601 37.33151184038578 2 14.006576254779091 13.952346040951788 3 4.600799364666917 6.874479205322014 4 1.992801990897806 3.970172647811336 5 1.1266015999951609 2.8055991499098765 6 0.6682494347377134 1.9969863838673094 7 0.4808967703876417 1.6766219738012758 8 0.3320672927887742 1.3231264210738716 9 0.2569508277429404 1.1518018818695028 >10 1.3656929449284079 12.525580464844824 >50 0.12204874062475503 4.238786196598255 >100 0.08448053047742661 8.30456674942627 >500 0.00787409734573175 2.702589173907689 >1k 0.0017349706016019113 1.1458318702302315 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1548 0.10240113461515563 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1544 0.10213653220012939 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.615060375656049E-5 0.0 0.0 0.0 6.615060375656049E-5 2 6.615060375656049E-5 0.0 0.0 0.0 6.615060375656049E-5 3 6.615060375656049E-5 0.0 0.0 0.0 6.615060375656049E-5 4 6.615060375656049E-5 0.0 0.0 0.0 6.615060375656049E-5 5 6.615060375656049E-5 0.0 0.0 0.0 1.3230120751312098E-4 6 1.3230120751312098E-4 0.0 0.0 0.0 1.9845181126968147E-4 7 1.9845181126968147E-4 0.0 0.0 0.0 1.9845181126968147E-4 8 1.9845181126968147E-4 0.0 0.0 0.0 1.9845181126968147E-4 9 1.9845181126968147E-4 0.0 0.0 0.0 1.9845181126968147E-4 10 1.9845181126968147E-4 0.0 0.0 6.615060375656049E-5 1.9845181126968147E-4 11 1.9845181126968147E-4 0.0 0.0 6.615060375656049E-5 1.9845181126968147E-4 12 1.9845181126968147E-4 0.0 0.0 1.3230120751312098E-4 8.599578488352863E-4 13 1.9845181126968147E-4 0.0 0.0 1.3230120751312098E-4 0.0011907108676180887 14 2.6460241502624196E-4 0.0 0.0 1.3230120751312098E-4 0.0011907108676180887 15 2.6460241502624196E-4 0.0 0.0 2.6460241502624196E-4 0.0012568614713746493 16 2.6460241502624196E-4 0.0 0.0 3.3075301878280244E-4 0.0012568614713746493 17 3.3075301878280244E-4 0.0 0.0 4.630542262959234E-4 0.0013230120751312098 18 3.3075301878280244E-4 0.0 0.0 5.292048300524839E-4 0.0013230120751312098 19 5.292048300524839E-4 0.0 0.0 5.953554338090443E-4 0.0013230120751312098 20 5.292048300524839E-4 0.0 0.0 7.938072450787259E-4 0.0014553132826443306 21 5.292048300524839E-4 0.0 0.0 9.261084525918468E-4 0.0014553132826443306 22 5.953554338090443E-4 0.0 0.0 0.0011245602638615283 0.001521463886400891 23 5.953554338090443E-4 0.0 0.0 0.0013891626788877702 0.001521463886400891 24 6.615060375656049E-4 0.0 0.0 0.002050668716453375 0.001521463886400891 25 6.615060375656049E-4 0.0 0.0 0.0023814217352361774 0.001521463886400891 26 6.615060375656049E-4 0.0 0.0 0.003042927772801782 0.0015876144901574517 27 6.615060375656049E-4 0.0 0.0 0.0035059819990977056 0.0016537650939140122 28 8.599578488352863E-4 0.0 0.0 0.004299789244176432 0.0016537650939140122 29 9.261084525918468E-4 0.0 0.0 0.005159747093011718 0.0016537650939140122 30 9.922590563484074E-4 0.0 0.0 0.007871921847030698 0.0016537650939140122 31 9.922590563484074E-4 0.0 0.0 0.012568614713746493 0.0016537650939140122 32 9.922590563484074E-4 0.0 0.0 0.01772836180675821 0.001786066301427133 33 0.0010584096601049678 0.0 0.0 0.022160452258447764 0.001786066301427133 34 0.0010584096601049678 0.0 0.0 0.026790994521406996 0.001786066301427133 35 0.0012568614713746493 0.0 0.0 0.03287685006701056 0.001786066301427133 36 0.0014553132826443306 0.0 0.0 0.04213793459292903 0.001786066301427133 37 0.0014553132826443306 0.0 0.0 0.05430964568413616 0.001786066301427133 38 0.0014553132826443306 0.0 0.0 0.0709795978307894 0.001786066301427133 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 855 0.0 28.055643 1 GTATCAA 2010 0.0 26.93388 1 TAGGACG 125 9.968062E-10 21.118984 4 TCTAGCG 320 0.0 20.624691 28 TACGAAT 320 0.0 19.938519 41 GAGCGTA 90 1.0026479E-5 19.554615 7 ATACGAA 340 0.0 19.412756 40 CAATACG 330 0.0 19.334322 38 CGCAATA 330 0.0 19.333683 36 ATAGTAC 220 0.0 18.999086 3 GTGTAGG 250 0.0 18.485836 1 ATACCGT 500 0.0 18.47911 6 CTAGCGG 360 0.0 18.333057 29 CGAATGC 355 0.0 17.973345 43 AATACGA 355 0.0 17.97275 39 ATCAACG 3005 0.0 17.93591 3 TAGCGGC 370 0.0 17.83757 30 ATTATAC 185 2.1827873E-11 17.83698 3 TCAACGC 3030 0.0 17.787924 4 TACCGTC 510 0.0 17.685423 7 >>END_MODULE