SRR4062271_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062271_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	242075
Sequences flagged as poor quality	0
Sequence length	25
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1128	0.46597128988949704	No Hit
TATCAACGCAGAGTACTTTTTTTTT	720	0.29742848290818963	No Hit
GGTATCAACGCAGAGTACTTTTTTT	440	0.1817618506661159	No Hit
CTCCTGGTGGTGCCCTTCCGTCAAT	429	0.17721780439946297	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	320	0.13219043684808426	No Hit
ACCATACTCCCCCCGGAACCCAAAG	318	0.13136424661778376	No Hit
CTCCACTCCTGGTGGTGCCCTTCCG	293	0.12103686873902715	No Hit
TCGTAGTTCCGACCATAAACGATGC	285	0.11773210781782506	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTG	280	0.11566663224207374	No Hit
GAATAGGACCGCGGTTCTATTTTGT	266	0.10988330062997005	No Hit
GTCAATCCTGTCCGTGTCCGGGCCG	248	0.10244758855726531	No Hit
GTATCTGATCGTCTTCGAACCTCCG	246	0.10162139832696478	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCGACC	40	2.7488108E-4	16.625181	3
CCGACCC	35	0.0021629238	16.28589	4
GGTATCA	105	0.0	16.282524	1
TCTTGCG	40	0.0052616834	14.250155	2
CCAAGAC	40	0.0052616834	14.250155	3
CGGTCCA	40	0.0052616834	14.250155	10
CGCCGGT	40	0.0052616834	14.250155	7
GCCGGTC	50	0.0014930484	13.300144	8
GGTATCT	50	0.0014930484	13.300144	11
CAAGACG	50	0.0014930484	13.300144	4
ACGGTAT	50	0.0014930484	13.300144	9
GTATCAA	340	0.0	13.129781	1
CCGTCAA	70	1.0834633E-4	12.214418	18
TATTCCA	55	0.003055333	12.091042	5
GACGGTA	55	0.003055333	12.091042	8
CAAGACC	55	0.003055333	12.091042	4
GGACAGG	55	0.003055333	12.091042	6
GTCTTGC	55	0.003060071	12.088541	1
TACGACG	65	7.979789E-4	11.692435	5
GAACTAC	65	7.993653E-4	11.690017	1