##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062266_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 785643 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.878882647716583 32.0 32.0 32.0 32.0 32.0 2 31.266338527804614 32.0 32.0 32.0 32.0 32.0 3 31.45644013884169 32.0 32.0 32.0 32.0 32.0 4 31.580259736292437 32.0 32.0 32.0 32.0 32.0 5 31.499408764540636 32.0 32.0 32.0 32.0 32.0 6 35.16606270277976 36.0 36.0 36.0 36.0 36.0 7 35.175766855938384 36.0 36.0 36.0 36.0 36.0 8 35.10195725030326 36.0 36.0 36.0 36.0 36.0 9 35.23851163951057 36.0 36.0 36.0 36.0 36.0 10 35.06873987294484 36.0 36.0 36.0 36.0 36.0 11 35.24638162626027 36.0 36.0 36.0 36.0 36.0 12 35.14526445217484 36.0 36.0 36.0 36.0 36.0 13 35.19670766493178 36.0 36.0 36.0 36.0 36.0 14 35.15193669389277 36.0 36.0 36.0 36.0 36.0 15 35.11992088009439 36.0 36.0 36.0 36.0 36.0 16 35.13930372955655 36.0 36.0 36.0 36.0 36.0 17 35.111470477048734 36.0 36.0 36.0 36.0 36.0 18 35.11787160326001 36.0 36.0 36.0 36.0 36.0 19 35.107761413262764 36.0 36.0 36.0 36.0 36.0 20 35.10299461714799 36.0 36.0 36.0 36.0 36.0 21 35.094820420980014 36.0 36.0 36.0 36.0 36.0 22 35.06884424605069 36.0 36.0 36.0 36.0 36.0 23 35.03846148950605 36.0 36.0 36.0 36.0 36.0 24 35.01760977950545 36.0 36.0 36.0 36.0 36.0 25 34.9976643335459 36.0 36.0 36.0 36.0 36.0 26 34.952680797766924 36.0 36.0 36.0 36.0 36.0 27 34.933417595523665 36.0 36.0 36.0 32.0 36.0 28 34.89922649345822 36.0 36.0 36.0 32.0 36.0 29 34.87428132115986 36.0 36.0 36.0 32.0 36.0 30 34.85945652160078 36.0 36.0 36.0 32.0 36.0 31 34.862153675397096 36.0 36.0 36.0 32.0 36.0 32 34.82954726256073 36.0 36.0 36.0 32.0 36.0 33 34.8120622216452 36.0 36.0 36.0 32.0 36.0 34 34.80102158359458 36.0 36.0 36.0 32.0 36.0 35 34.78245844486618 36.0 36.0 36.0 32.0 36.0 36 34.74556127910514 36.0 36.0 36.0 32.0 36.0 37 34.72721706933047 36.0 36.0 36.0 32.0 36.0 38 34.69539981900176 36.0 36.0 36.0 32.0 36.0 39 34.65899778907214 36.0 36.0 36.0 32.0 36.0 40 34.665794769379985 36.0 36.0 36.0 32.0 36.0 41 34.628459745711474 36.0 36.0 36.0 32.0 36.0 42 34.599721502005366 36.0 36.0 36.0 32.0 36.0 43 34.610870331690094 36.0 36.0 36.0 32.0 36.0 44 34.545773334708 36.0 36.0 36.0 32.0 36.0 45 34.52794971761983 36.0 36.0 36.0 32.0 36.0 46 34.47147495745523 36.0 36.0 36.0 32.0 36.0 47 34.463456048103275 36.0 36.0 36.0 32.0 36.0 48 34.42077253918128 36.0 36.0 36.0 32.0 36.0 49 34.39104656949785 36.0 36.0 36.0 32.0 36.0 50 33.959916908825 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 9.0 21 14.0 22 44.0 23 135.0 24 400.0 25 854.0 26 1896.0 27 3718.0 28 6472.0 29 10722.0 30 16450.0 31 24977.0 32 38478.0 33 67304.0 34 150891.0 35 463279.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.26166366822891 18.558738186091578 12.339940082173745 25.839658063505766 2 15.706433743037241 20.010870561399578 38.048110508039635 26.23458518752355 3 19.052849838539483 22.984798400287154 28.755245716555017 29.207106044618342 4 12.497931627891584 15.942884927231487 35.84724340093834 35.71194004393859 5 14.39536073682415 36.91452340888089 33.36786984402565 15.322246010269309 6 34.87619042770117 35.383673479778324 16.321301559743496 13.418834532777016 7 30.61594133722314 30.2133411740447 19.774375893376508 19.39634159535565 8 27.723278893848736 34.51975006459677 18.669293814111498 19.087677227443 9 26.805813836564447 14.41010738974318 18.667511834255507 40.11656693943687 10 16.510828087093106 26.988373839484144 31.0408557587298 25.459942314692952 11 37.526459218754574 21.106023982903178 22.03290807656913 19.334608721773122 12 24.366919835090492 23.555864432063927 29.118314552538493 22.958901180307087 13 29.812013853620538 19.434399593708594 25.275474993094825 25.47811155957604 14 23.04456349767006 20.004124010523864 25.19604960522782 31.755262886578254 15 24.994304028674602 28.105513572958714 21.90816948664979 24.9920129117169 16 25.254730250052503 26.108816435112995 24.43246545787802 24.203987856956473 17 23.575975347581533 26.482384492702156 25.433816631727137 24.507823527989174 18 24.192667662029702 25.435725895858553 26.90242260161422 23.46918384049753 19 25.727461455139295 24.899095390654534 25.224815851474524 24.148627302731647 20 25.601260626672996 24.95465486144435 25.27528476747013 24.168799744412524 21 26.245763024681697 24.47778443898819 24.621615670221715 24.654836866108397 22 25.477602422474334 24.999140831140863 25.328297967397408 24.194958778987402 23 24.354095122205788 24.85839606334692 25.635340269486612 25.15216854496068 24 24.676281794263762 25.066665648384685 25.730076358419986 24.526976198931568 25 24.804044610876765 24.778205738520796 25.818252172119983 24.59949747848246 26 23.861662005928917 25.87861376888426 26.303871615661606 23.955852609525216 27 24.492770225548597 25.285627004734994 25.79349320299374 24.42810956672267 28 24.16509998943527 25.400027748325236 25.766865699378716 24.668006562860775 29 24.170867063795125 24.993635761926583 25.694083804286947 25.141413369991344 30 24.175344404688715 25.440569427632052 25.94080427070724 24.44328189697199 31 25.11150145104628 24.842548750063642 25.24018634489079 24.805763453999287 32 24.70880243370013 25.34370286456179 25.236146556607075 24.71134814513101 33 24.323674141657396 25.059505474503652 25.87845354499887 24.738366838840083 34 24.83172868860388 25.341761324582883 26.018665132453194 23.807844854360035 35 25.039489946451503 25.285275882302777 25.84799966396951 23.827234507276206 36 23.83426547969686 25.75804246717971 25.74391389462376 24.66377815849967 37 24.99567225200731 25.254955271451628 25.256991858742307 24.492380617798755 38 24.650636485019277 25.26096458569605 25.47862069667775 24.60977823260692 39 25.258229945891042 24.830933369991484 25.249192693317653 24.661643990799824 40 25.70245188323929 25.1059962501957 25.34898255055426 23.84256931601075 41 24.46670527662337 25.178231621554538 26.319855912733015 24.035207189089082 42 25.339293942734365 25.681197349293917 25.47664084358237 23.502867864389348 43 24.710544136291198 24.914970748919313 25.871040666384932 24.503444448404558 44 24.04307453396384 25.736270310521057 25.480674376125712 24.739980779389395 45 24.36340817357811 25.693934414335516 25.469146378252333 24.473511033834036 46 24.339571246369136 25.26202035065031 25.33941086471171 25.058997538268844 47 24.963755433502836 25.229145850172152 25.543795783029015 24.263302933295996 48 25.19144407898087 25.574459526888727 24.71945295872751 24.514643435402895 49 24.792297538628773 25.551571436026876 25.13215693612298 24.523974089221365 50 24.71793409637082 25.929824650727056 24.580847012341657 24.771394240560465 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 188.0 1 111.0 2 34.0 3 83.0 4 132.0 5 131.0 6 130.0 7 100.5 8 71.0 9 101.5 10 132.0 11 252.5 12 373.0 13 680.5 14 988.0 15 1249.5 16 1511.0 17 1617.5 18 1724.0 19 1588.5 20 1453.0 21 1748.0 22 2043.0 23 2467.0 24 2891.0 25 3968.0 26 5045.0 27 6960.5 28 8876.0 29 10559.0 30 12242.0 31 13941.0 32 15640.0 33 18117.0 34 20594.0 35 23805.0 36 27016.0 37 30228.0 38 33440.0 39 35185.5 40 36931.0 41 38688.0 42 40445.0 43 41527.5 44 42610.0 45 45822.0 46 49034.0 47 52012.5 48 54991.0 49 56930.0 50 58869.0 51 58075.0 52 57281.0 53 56329.0 54 55377.0 55 55956.0 56 56535.0 57 53970.0 58 51405.0 59 47093.0 60 42781.0 61 37539.5 62 32298.0 63 27831.0 64 23364.0 65 19634.5 66 15905.0 67 13566.0 68 11227.0 69 9753.0 70 8279.0 71 6566.5 72 4854.0 73 4251.0 74 3648.0 75 2717.5 76 1787.0 77 1568.0 78 1349.0 79 1121.0 80 893.0 81 723.0 82 553.0 83 459.0 84 365.0 85 285.0 86 205.0 87 138.5 88 72.0 89 47.0 90 22.0 91 16.5 92 11.0 93 11.5 94 12.0 95 11.0 96 10.0 97 7.5 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.029784520450128114 2 0.004454949639976427 3 2.545685508557958E-4 4 1.272842754278979E-4 5 1.272842754278979E-4 6 1.272842754278979E-4 7 0.0 8 0.0 9 0.0 10 1.272842754278979E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0010182742034231832 17 0.0 18 0.0 19 0.0 20 2.545685508557958E-4 21 0.0 22 0.0 23 1.272842754278979E-4 24 7.637056525673874E-4 25 6.364213771394895E-4 26 2.545685508557958E-4 27 3.818528262836937E-4 28 0.001272842754278979 29 3.818528262836937E-4 30 0.0015274113051347749 31 3.818528262836937E-4 32 0.0010182742034231832 33 1.272842754278979E-4 34 8.909899279952855E-4 35 0.0 36 1.272842754278979E-4 37 0.0019092641314184685 38 0.0 39 7.637056525673874E-4 40 2.545685508557958E-4 41 0.0010182742034231832 42 0.005218655292543815 43 0.003945812538264835 44 0.003563959711981142 45 0.001781979855990571 46 0.0021638326822742645 47 0.0010182742034231832 48 0.004454949639976427 49 0.0030548226102695497 50 0.001400127029706877 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 785643.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.711445102744385 #Duplication Level Percentage of deduplicated Percentage of total 1 79.04968020508228 47.99220320160353 2 13.24295494389778 16.07997864149135 3 3.568369106347092 6.499225353189615 4 1.3785481798668624 3.347746085739009 5 0.7377612256603647 2.2395275075306325 6 0.43118059149830756 1.5706558086071014 7 0.2793063618629653 1.1869964998563474 8 0.19560446555249594 0.9500343817793612 9 0.15373484777433027 0.8400118293927016 >10 0.8387787312896964 9.288405185458616 >50 0.06973058486560443 3.026962084159905 >100 0.052033475997845996 6.073773963660834 >500 0.002317280304342079 0.9044794575309505 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.272842754278979E-4 2 0.0 0.0 0.0 0.0 1.272842754278979E-4 3 0.0 0.0 0.0 0.0 1.272842754278979E-4 4 0.0 0.0 0.0 0.0 1.272842754278979E-4 5 0.0 0.0 0.0 0.0 1.272842754278979E-4 6 0.0 0.0 0.0 0.0 1.272842754278979E-4 7 0.0 0.0 0.0 0.0 1.272842754278979E-4 8 0.0 0.0 0.0 0.0 1.272842754278979E-4 9 0.0 0.0 0.0 0.0 1.272842754278979E-4 10 0.0 0.0 0.0 0.0 1.272842754278979E-4 11 0.0 0.0 0.0 0.0 1.272842754278979E-4 12 0.0 0.0 0.0 0.0 2.545685508557958E-4 13 0.0 0.0 0.0 0.0 3.818528262836937E-4 14 0.0 0.0 0.0 0.0 3.818528262836937E-4 15 0.0 0.0 0.0 2.545685508557958E-4 6.364213771394895E-4 16 0.0 0.0 0.0 3.818528262836937E-4 6.364213771394895E-4 17 0.0 0.0 0.0 3.818528262836937E-4 6.364213771394895E-4 18 0.0 0.0 0.0 3.818528262836937E-4 7.637056525673874E-4 19 0.0 0.0 0.0 3.818528262836937E-4 7.637056525673874E-4 20 0.0 0.0 0.0 6.364213771394895E-4 7.637056525673874E-4 21 0.0 0.0 0.0 7.637056525673874E-4 7.637056525673874E-4 22 0.0 0.0 0.0 8.909899279952853E-4 7.637056525673874E-4 23 0.0 0.0 0.0 0.001272842754278979 7.637056525673874E-4 24 0.0 0.0 0.0 0.0017819798559905707 7.637056525673874E-4 25 0.0 0.0 0.0 0.0021638326822742645 7.637056525673874E-4 26 0.0 0.0 0.0 0.0024184012331300605 8.909899279952853E-4 27 0.0 0.0 0.0 0.002927538334841652 8.909899279952853E-4 28 0.0 0.0 0.0 0.0035639597119811414 8.909899279952853E-4 29 0.0 0.0 0.0 0.004454949639976427 8.909899279952853E-4 30 0.0 0.0 0.0 0.005727792394255406 8.909899279952853E-4 31 0.0 0.0 0.0 0.009291752106236548 8.909899279952853E-4 32 0.0 0.0 0.0 0.013110280369073486 8.909899279952853E-4 33 0.0 0.0 0.0 0.016546955805626727 8.909899279952853E-4 34 0.0 0.0 0.0 0.02087462117017526 0.0010182742034231832 35 0.0 0.0 0.0 0.026602413564430664 0.0010182742034231832 36 0.0 0.0 0.0 0.03296662733582556 0.0010182742034231832 37 0.0 0.0 0.0 0.043658506471768985 0.0010182742034231832 38 0.0 0.0 0.0 0.058168913870549344 0.0010182742034231832 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1050 0.0 24.731216 1 TGCGCGT 45 0.0013979316 24.443985 10 GGTATCA 515 0.0 24.35681 1 TAGGACG 470 0.0 22.93574 4 GATATAC 290 0.0 22.765438 1 GTATAGT 50 0.0025751588 22.006588 1 GGACGTG 470 0.0 21.999586 6 ATACACT 375 0.0 21.706259 4 GTAGGAC 545 0.0 20.99043 3 TGTAGGA 520 0.0 20.731699 2 TCCTATA 85 6.106573E-6 20.70681 2 TATTATG 85 6.106573E-6 20.70681 2 GTATTAC 75 5.4569115E-5 20.539482 1 AGGACGT 525 0.0 20.532948 5 CGCAATA 140 1.8371793E-10 20.42949 36 ATCGATT 65 4.9306743E-4 20.30731 29 ACGTATG 135 2.593879E-9 19.55519 32 GACGTGA 290 0.0 18.965162 7 CGGTAGC 70 8.103531E-4 18.862791 1 ACTGTTC 420 0.0 18.856789 8 >>END_MODULE